Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_N07
         (655 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006254-1|AAH06254.1|  183|Homo sapiens C15orf41 protein protein.     38   0.041
AF114263-1|AAD29606.1|  183|Homo sapiens unknown protein.              38   0.041

>BC006254-1|AAH06254.1|  183|Homo sapiens C15orf41 protein protein.
          Length = 183

 Score = 37.5 bits (83), Expect = 0.041
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +1

Query: 592 NITFSDENVLRSRGYDKTPDF 654
           N++F DE+ LR++GYDKTPDF
Sbjct: 79  NLSFLDEDQLRAKGYDKTPDF 99



 Score = 33.9 bits (74), Expect = 0.51
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +2

Query: 419 TISKKYIKDTTLIDNKDLAYQVFMGIMNDNQYGPYADVTKQSIG 550
           +I    ++D + I +  LA QV+  I+ND  YGP  D  K +IG
Sbjct: 21  SIINSMLRDPSQIPDGVLANQVYQCIVNDCCYGPLVDCIKHAIG 64


>AF114263-1|AAD29606.1|  183|Homo sapiens unknown protein.
          Length = 183

 Score = 37.5 bits (83), Expect = 0.041
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +1

Query: 592 NITFSDENVLRSRGYDKTPDF 654
           N++F DE+ LR++GYDKTPDF
Sbjct: 79  NLSFLDEDQLRAKGYDKTPDF 99



 Score = 33.9 bits (74), Expect = 0.51
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +2

Query: 419 TISKKYIKDTTLIDNKDLAYQVFMGIMNDNQYGPYADVTKQSIG 550
           +I    ++D + I +  LA QV+  I+ND  YGP  D  K +IG
Sbjct: 21  SIINSMLRDPSQIPDGVLANQVYQCIVNDCCYGPLVDCIKHAIG 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,363,895
Number of Sequences: 237096
Number of extensions: 1157681
Number of successful extensions: 1992
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1991
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)