Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_M12
(655 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 192 7e-49
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 192 7e-49
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 192 7e-49
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 192 9e-49
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 192 9e-49
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 192 9e-49
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 192 9e-49
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 192 9e-49
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 177 2e-44
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 117 4e-26
M55040-1|AAA68151.1| 614|Homo sapiens acetylcholinesterase prot... 31 3.6
BC105062-1|AAI05063.1| 617|Homo sapiens acetylcholinesterase, i... 31 3.6
BC105060-1|AAI05061.1| 617|Homo sapiens acetylcholinesterase (Y... 31 3.6
BC094752-1|AAH94752.1| 640|Homo sapiens ACHE protein protein. 31 3.6
BC036813-1|AAH36813.1| 546|Homo sapiens ACHE protein protein. 31 3.6
AY750146-1|AAU43801.1| 617|Homo sapiens acetylcholinesterase (Y... 31 3.6
AK223443-1|BAD97163.1| 614|Homo sapiens acetylcholinesterase is... 31 3.6
AF334270-1|AAO32948.1| 526|Homo sapiens apoptosis-related acety... 31 3.6
AC011895-2|AAP22364.1| 617|Homo sapiens unknown protein. 31 3.6
AC011895-1|AAP22365.1| 614|Homo sapiens unknown protein. 31 3.6
BX276089-3|CAI16433.1| 280|Homo sapiens katanin p60 (ATPase-con... 30 8.3
BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60 (ATPase-con... 30 8.3
BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-l... 30 8.3
AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-l... 30 8.3
AL078581-3|CAI19506.1| 280|Homo sapiens katanin p60 (ATPase-con... 30 8.3
AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60 (ATPase-con... 30 8.3
AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein. 30 8.3
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 192 bits (469), Expect = 7e-49
Identities = 107/186 (57%), Positives = 127/186 (68%)
Frame = +1
Query: 40 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 219
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 220 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAYALRVPLVCNLEXE 399
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG +VC LE +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMP-EGTIVCCLEEK 119
Query: 400 NG**RSFWHVPXGNFXPL*LDTILMLSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDV 579
G R GN+ + + +TRVKLP S + S R G+VAG
Sbjct: 120 PG-DRGKLARASGNYATV-ISHNPETKKTRVKLPSGSKKVI--SSANRAVVGVVAG-GGR 174
Query: 580 IDKTLI 597
IDK ++
Sbjct: 175 IDKPIL 180
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 192 bits (469), Expect = 7e-49
Identities = 107/186 (57%), Positives = 127/186 (68%)
Frame = +1
Query: 40 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 219
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 220 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAYALRVPLVCNLEXE 399
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG +VC LE +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMP-EGTIVCCLEEK 119
Query: 400 NG**RSFWHVPXGNFXPL*LDTILMLSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDV 579
G R GN+ + + +TRVKLP S + S R G+VAG
Sbjct: 120 PG-DRGKLARASGNYATV-ISHNPETKKTRVKLPSGSKKVI--SSANRAVVGVVAG-GGR 174
Query: 580 IDKTLI 597
IDK ++
Sbjct: 175 IDKPIL 180
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 192 bits (469), Expect = 7e-49
Identities = 107/186 (57%), Positives = 127/186 (68%)
Frame = +1
Query: 40 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 219
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 220 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAYALRVPLVCNLEXE 399
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG +VC LE +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMP-EGTIVCCLEEK 119
Query: 400 NG**RSFWHVPXGNFXPL*LDTILMLSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDV 579
G R GN+ + + +TRVKLP S + S R G+VAG
Sbjct: 120 PG-DRGKLARASGNYATV-ISHNPETKKTRVKLPSGSKKVI--SSANRAVVGVVAG-GGR 174
Query: 580 IDKTLI 597
IDK ++
Sbjct: 175 IDKPIL 180
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 192 bits (468), Expect = 9e-49
Identities = 106/186 (56%), Positives = 127/186 (68%)
Frame = +1
Query: 40 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 219
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 220 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAYALRVPLVCNLEXE 399
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG +VC LE +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP-EGTIVCCLEEK 119
Query: 400 NG**RSFWHVPXGNFXPL*LDTILMLSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDV 579
G R GN+ + + +TRVKLP S + S R G+VAG
Sbjct: 120 PG-DRGKLARASGNYATV-ISHNPETKKTRVKLPSGSKKVI--SSANRAVVGVVAG-GGR 174
Query: 580 IDKTLI 597
IDK ++
Sbjct: 175 IDKPIL 180
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 192 bits (468), Expect = 9e-49
Identities = 106/186 (56%), Positives = 127/186 (68%)
Frame = +1
Query: 40 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 219
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 220 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAYALRVPLVCNLEXE 399
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG +VC LE +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP-EGTIVCCLEEK 119
Query: 400 NG**RSFWHVPXGNFXPL*LDTILMLSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDV 579
G R GN+ + + +TRVKLP S + S R G+VAG
Sbjct: 120 PG-DRGKLARASGNYATV-ISHNPETKKTRVKLPSGSKKVI--SSANRAVVGVVAG-GGR 174
Query: 580 IDKTLI 597
IDK ++
Sbjct: 175 IDKPIL 180
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 192 bits (468), Expect = 9e-49
Identities = 106/186 (56%), Positives = 127/186 (68%)
Frame = +1
Query: 40 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 219
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 220 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAYALRVPLVCNLEXE 399
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG +VC LE +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP-EGTIVCCLEEK 119
Query: 400 NG**RSFWHVPXGNFXPL*LDTILMLSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDV 579
G R GN+ + + +TRVKLP S + S R G+VAG
Sbjct: 120 PG-DRGKLARASGNYATV-ISHNPETKKTRVKLPSGSKKVI--SSANRAVVGVVAG-GGR 174
Query: 580 IDKTLI 597
IDK ++
Sbjct: 175 IDKPIL 180
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 192 bits (468), Expect = 9e-49
Identities = 106/186 (56%), Positives = 127/186 (68%)
Frame = +1
Query: 40 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 219
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 220 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAYALRVPLVCNLEXE 399
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG +VC LE +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP-EGTIVCCLEEK 119
Query: 400 NG**RSFWHVPXGNFXPL*LDTILMLSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDV 579
G R GN+ + + +TRVKLP S + S R G+VAG
Sbjct: 120 PG-DRGKLARASGNYATV-ISHNPETKKTRVKLPSGSKKVI--SSANRAVVGVVAG-GGR 174
Query: 580 IDKTLI 597
IDK ++
Sbjct: 175 IDKPIL 180
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 192 bits (468), Expect = 9e-49
Identities = 106/186 (56%), Positives = 127/186 (68%)
Frame = +1
Query: 40 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 219
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 220 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAYALRVPLVCNLEXE 399
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG +VC LE +
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP-EGTIVCCLEEK 119
Query: 400 NG**RSFWHVPXGNFXPL*LDTILMLSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDV 579
G R GN+ + + +TRVKLP S + S R G+VAG
Sbjct: 120 PG-DRGKLARASGNYATV-ISHNPETKKTRVKLPSGSKKVI--SSANRAVVGVVAG-GGR 174
Query: 580 IDKTLI 597
IDK ++
Sbjct: 175 IDKPIL 180
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 177 bits (432), Expect = 2e-44
Identities = 83/118 (70%), Positives = 96/118 (81%)
Frame = +1
Query: 52 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 231
IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 232 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAYALRVPLVCNLEXENG 405
DPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG +VC LE + G
Sbjct: 61 DPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP-EGTIVCCLEEKPG 117
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 117 bits (281), Expect = 4e-26
Identities = 71/140 (50%), Positives = 86/140 (61%)
Frame = +1
Query: 178 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 357
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 358 YALRVPLVCNLEXENG**RSFWHVPXGNFXPL*LDTILMLSRTRVKLPVWSPRRFCHPSN 537
+VC LE + G R GN+ + + +TRVKLP S + S
Sbjct: 61 MP-EGTIVCCLEEKPG-DRGKLARASGNYATV-ISHNPETKKTRVKLPSGSKKVI--SSA 115
Query: 538 RRPWSGIVAGRXDVIDKTLI 597
R G+VAG IDK ++
Sbjct: 116 NRAVVGVVAG-GGRIDKPIL 134
>M55040-1|AAA68151.1| 614|Homo sapiens acetylcholinesterase
protein.
Length = 614
Score = 31.1 bits (67), Expect = 3.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 499 PVWSPRRFCHPSNRRPWSGIV 561
P PRRF P ++PWSG+V
Sbjct: 71 PPMGPRRFLPPEPKQPWSGVV 91
>BC105062-1|AAI05063.1| 617|Homo sapiens acetylcholinesterase,
isoform E4-E5 precursor protein.
Length = 617
Score = 31.1 bits (67), Expect = 3.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 499 PVWSPRRFCHPSNRRPWSGIV 561
P PRRF P ++PWSG+V
Sbjct: 71 PPMGPRRFLPPEPKQPWSGVV 91
>BC105060-1|AAI05061.1| 617|Homo sapiens acetylcholinesterase (Yt
blood group) protein.
Length = 617
Score = 31.1 bits (67), Expect = 3.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 499 PVWSPRRFCHPSNRRPWSGIV 561
P PRRF P ++PWSG+V
Sbjct: 71 PPMGPRRFLPPEPKQPWSGVV 91
>BC094752-1|AAH94752.1| 640|Homo sapiens ACHE protein protein.
Length = 640
Score = 31.1 bits (67), Expect = 3.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 499 PVWSPRRFCHPSNRRPWSGIV 561
P PRRF P ++PWSG+V
Sbjct: 71 PPMGPRRFLPPEPKQPWSGVV 91
>BC036813-1|AAH36813.1| 546|Homo sapiens ACHE protein protein.
Length = 546
Score = 31.1 bits (67), Expect = 3.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 499 PVWSPRRFCHPSNRRPWSGIV 561
P PRRF P ++PWSG+V
Sbjct: 71 PPMGPRRFLPPEPKQPWSGVV 91
>AY750146-1|AAU43801.1| 617|Homo sapiens acetylcholinesterase (YT
blood group) protein.
Length = 617
Score = 31.1 bits (67), Expect = 3.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 499 PVWSPRRFCHPSNRRPWSGIV 561
P PRRF P ++PWSG+V
Sbjct: 71 PPMGPRRFLPPEPKQPWSGVV 91
>AK223443-1|BAD97163.1| 614|Homo sapiens acetylcholinesterase
isoform E4-E6 precursor variant protein.
Length = 614
Score = 31.1 bits (67), Expect = 3.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 499 PVWSPRRFCHPSNRRPWSGIV 561
P PRRF P ++PWSG+V
Sbjct: 71 PPMGPRRFLPPEPKQPWSGVV 91
>AF334270-1|AAO32948.1| 526|Homo sapiens apoptosis-related
acetylcholinesterase protein.
Length = 526
Score = 31.1 bits (67), Expect = 3.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 499 PVWSPRRFCHPSNRRPWSGIV 561
P PRRF P ++PWSG+V
Sbjct: 71 PPMGPRRFLPPEPKQPWSGVV 91
>AC011895-2|AAP22364.1| 617|Homo sapiens unknown protein.
Length = 617
Score = 31.1 bits (67), Expect = 3.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 499 PVWSPRRFCHPSNRRPWSGIV 561
P PRRF P ++PWSG+V
Sbjct: 71 PPMGPRRFLPPEPKQPWSGVV 91
>AC011895-1|AAP22365.1| 614|Homo sapiens unknown protein.
Length = 614
Score = 31.1 bits (67), Expect = 3.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 499 PVWSPRRFCHPSNRRPWSGIV 561
P PRRF P ++PWSG+V
Sbjct: 71 PPMGPRRFLPPEPKQPWSGVV 91
>BX276089-3|CAI16433.1| 280|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 280
Score = 29.9 bits (64), Expect = 8.3
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 475 LSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDVIDKTLILKS 606
L + V LP+W P F RRPW G++ KTL+ K+
Sbjct: 220 LLKEAVVLPMWMPEFF--KGIRRPWKGVLMVGPPGTGKTLLAKA 261
>BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 29.9 bits (64), Expect = 8.3
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 475 LSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDVIDKTLILKS 606
L + V LP+W P F RRPW G++ KTL+ K+
Sbjct: 220 LLKEAVVLPMWMPEFF--KGIRRPWKGVLMVGPPGTGKTLLAKA 261
>BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 457 LDTILMLSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDVIDKTLILKS 606
L+ L R V LP+W P F RRPW G++ KT++ K+
Sbjct: 213 LEEAKKLLREAVVLPMWMPDFF--KGIRRPWKGVLMVGPPGTGKTMLAKA 260
>AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 457 LDTILMLSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDVIDKTLILKS 606
L+ L R V LP+W P F RRPW G++ KT++ K+
Sbjct: 213 LEEAKKLLREAVVLPMWMPDFF--KGIRRPWKGVLMVGPPGTGKTMLAKA 260
>AL078581-3|CAI19506.1| 280|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 280
Score = 29.9 bits (64), Expect = 8.3
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 475 LSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDVIDKTLILKS 606
L + V LP+W P F RRPW G++ KTL+ K+
Sbjct: 220 LLKEAVVLPMWMPEFF--KGIRRPWKGVLMVGPPGTGKTLLAKA 261
>AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 29.9 bits (64), Expect = 8.3
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 475 LSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDVIDKTLILKS 606
L + V LP+W P F RRPW G++ KTL+ K+
Sbjct: 220 LLKEAVVLPMWMPEFF--KGIRRPWKGVLMVGPPGTGKTLLAKA 261
>AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein.
Length = 491
Score = 29.9 bits (64), Expect = 8.3
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 475 LSRTRVKLPVWSPRRFCHPSNRRPWSGIVAGRXDVIDKTLILKS 606
L + V LP+W P F RRPW G++ KTL+ K+
Sbjct: 220 LLKEAVVLPMWMPEFF--KGIRRPWKGVLMVGPPGTGKTLLAKA 261
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,504,079
Number of Sequences: 237096
Number of extensions: 2350551
Number of successful extensions: 4195
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4186
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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