Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_M12
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical pr...   178   2e-45
Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z99281-24|CAE18027.1|  155|Caenorhabditis elegans Hypothetical p...    28   6.7  

>Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical
           protein B0250.1 protein.
          Length = 260

 Score =  178 bits (434), Expect = 2e-45
 Identities = 92/176 (52%), Positives = 119/176 (67%)
 Frame = +1

Query: 40  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 219
           MGR IR QRKGAG +F SH K RKGA KLR LDYAERHGYIKG+VKDIIHDPGRGAPLA+
Sbjct: 1   MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60

Query: 220 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAYALRVPLVCNLEXE 399
           + FRDPYK+KT K   +A EG++TGQF++CG KA +++GN++PVG        +CN+E +
Sbjct: 61  IAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLP-EGTTICNVENK 119

Query: 400 NG**RSFWHVPXGNFXPL*LDTILMLSRTRVKLPVWSPRRFCHPSNRRPWSGIVAG 567
           +G  R       GN+  + +       +TR++LP  S  +    S  R   G+VAG
Sbjct: 120 SG-DRGVIARASGNYATV-IAHNPDTKKTRIRLP--SGAKKVVQSVNRAMIGLVAG 171


>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 40  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAER 150
           +GR  R+ +KG    F +HT   K    L+ LD A++
Sbjct: 464 IGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQ 500


>Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 151 HGYIKGVVKDIIHDPGRGAPLAVVHFR 231
           HG +  +V  I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311


>Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 151 HGYIKGVVKDIIHDPGRGAPLAVVHFR 231
           HG +  +V  I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311


>Z99281-24|CAE18027.1|  155|Caenorhabditis elegans Hypothetical
           protein Y57G11C.44 protein.
          Length = 155

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +1

Query: 88  VSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 213
           +S  ++RK +     LD+++  G  K ++KDI +D  +  P+
Sbjct: 1   MSEVRQRKSSIIDSDLDFSDSDGEFKEIIKDIENDQWKDKPV 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,147,908
Number of Sequences: 27780
Number of extensions: 336669
Number of successful extensions: 726
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)