Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_M09
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110490-11|CAB54452.1| 620|Caenorhabditis elegans Hypothetical... 242 2e-64
Z83106-1|CAB05493.1| 359|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 5.2
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 5.2
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 28 5.2
Z81066-2|CAB02971.1| 239|Caenorhabditis elegans Hypothetical pr... 28 6.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 6.9
>AL110490-11|CAB54452.1| 620|Caenorhabditis elegans Hypothetical
protein Y48B6A.12 protein.
Length = 620
Score = 242 bits (592), Expect = 2e-64
Identities = 112/187 (59%), Positives = 139/187 (74%), Gaps = 2/187 (1%)
Frame = +2
Query: 110 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYIY 289
G+D LK PGLNKGMAF++ ERQ LG+HGLLPP T+E+Q + + + L KYI
Sbjct: 51 GIDLLKSPGLNKGMAFSLHERQYLGVHGLLPPAFMTEEQQAYRIITKLRQQPDNLAKYIQ 110
Query: 290 LMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDK--GH 463
L L DRNE L+YR + DNV E+MPIVYTPTVG ACQ FG +YR P+GL+ITI+D
Sbjct: 111 LDSLQDRNEKLYYRVLCDNVKELMPIVYTPTVGQACQHFGFIYRNPKGLYITINDNSISK 170
Query: 464 VYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPIT 643
++ +L NWP +VRAIV+TDGERILGLGDLG G+GIPVGKLALY AL GI+P CLP+
Sbjct: 171 IHQILANWPTENVRAIVITDGERILGLGDLGTYGIGIPVGKLALYVALAGIRPEWCLPVI 230
Query: 644 IDVGYEH 664
+DVG ++
Sbjct: 231 LDVGTDN 237
>Z83106-1|CAB05493.1| 359|Caenorhabditis elegans Hypothetical
protein F22B8.1 protein.
Length = 359
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 270 HLTSTSILWGSWTAMSICSTVS 335
H TS ++LW SW+A+ I +T+S
Sbjct: 200 HETSPAVLWKSWSAILILTTLS 221
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 197 LPPRVKTQEEQVELCKLSIDRYENPLNKYIYLMGLLDRNEH 319
L ++K + ++EL + + ++E+ L+ ++ G+L RNEH
Sbjct: 1215 LTEQIKVTQAEIELHRRDLKKHESNLSDFVMKHGIL-RNEH 1254
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 197 LPPRVKTQEEQVELCKLSIDRYENPLNKYIYLMGLLDRNEH 319
L ++K + ++EL + + ++E+ L+ ++ G+L RNEH
Sbjct: 1215 LTEQIKVTQAEIELHRRDLKKHESNLSDFVMKHGIL-RNEH 1254
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 282 TSILWGSWTAMSICSTVS 335
TS +WG W A S C TV+
Sbjct: 52 TSAIWGDWGAWSTCPTVT 69
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 282 TSILWGSWTAMSICSTVS 335
TS +WG W A S C TV+
Sbjct: 52 TSAIWGDWGAWSTCPTVT 69
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 282 TSILWGSWTAMSICSTVS 335
TS +WG W A S C TV+
Sbjct: 52 TSAIWGDWGAWSTCPTVT 69
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 282 TSILWGSWTAMSICSTVS 335
TS +WG W A S C TV+
Sbjct: 52 TSAIWGDWGAWSTCPTVT 69
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 594 STPRSEASSLISVYPSLSTWGTNT 665
STP + A+ + P++S WGTNT
Sbjct: 660 STPGTMATGTTPMTPTVSVWGTNT 683
>Z81066-2|CAB02971.1| 239|Caenorhabditis elegans Hypothetical
protein F17B5.3 protein.
Length = 239
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 477 RTSYTCPLSWIVMKRPLGR 421
R + TCP WI +RP GR
Sbjct: 66 RPTRTCPRDWITFERPQGR 84
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 192 PCMPKS*RSSMVKAMPLLRPGCLRWSRPERPLVGCPSPEPHNPIRS 55
P P+ R+ ++ P RP S RP PSPEP NP R+
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRT 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,872,692
Number of Sequences: 27780
Number of extensions: 398685
Number of successful extensions: 1132
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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