Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_M07
         (655 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0966 + 29776340-29776433,29776581-29776682,29777038-297771...   112   2e-25
08_02_0610 + 19307537-19308011,19308187-19310846                       29   3.2  
04_03_0357 + 14852584-14853058,14853116-14855754                       29   3.2  
04_01_0106 + 1102880-1105691,1105781-1105806                           28   5.6  
01_03_0146 + 13120727-13121037,13121063-13121912,13122854-131235...    28   7.5  
01_07_0104 + 41101909-41102017,41103490-41103568,41103663-411037...    27   9.9  

>04_04_0966 +
           29776340-29776433,29776581-29776682,29777038-29777154,
           29777428-29777621,29777702-29777807,29777908-29778055,
           29778201-29778337,29778436-29778602,29778681-29778974
          Length = 452

 Score =  112 bits (270), Expect = 2e-25
 Identities = 58/146 (39%), Positives = 81/146 (55%)
 Frame = +3

Query: 207 GGAERLVVDAALAFQKKGHEVAFYTNHHDPTHCFAETRDGTFRVTVVGDWIPRSILGRFK 386
           GGAERL+VDAA      GH+V  +T+HHD   CF ET  G F V V GD++PR I  RF 
Sbjct: 66  GGAERLIVDAACQLAVHGHDVHVFTSHHDKNRCFEETVSGPFEVKVYGDFLPRHIFYRF- 124

Query: 387 XXXXXXXXXXXXXXXXXXXXPNEEPLLIFCDSISLCIPFLKMARGPFRVIFYCHHPDKLL 566
                               P+ + +L+  D +S+ IP LK+ +   +++FYCH PD LL
Sbjct: 125 HAICAYLRCIFVAMCVLLWWPSFDIILV--DQVSVVIPLLKL-KAKSKIVFYCHFPDMLL 181

Query: 567 TSEGGILKKLYRAPLNWLEELTTAKA 644
                +L++LYR P++ +EE TT  A
Sbjct: 182 AQHTTMLRRLYRKPIDMIEETTTGMA 207


>08_02_0610 + 19307537-19308011,19308187-19310846
          Length = 1044

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -3

Query: 440 VPCHIS---SCINHTYIGTCSLKSSQNGPGYPIANNRNTK 330
           VP H+S   S  +H    TC+++   N PG P +N+ N K
Sbjct: 502 VPFHVSTVKSVTSHQDNRTCTIRIFFNVPGMPFSNDSNLK 541


>04_03_0357 + 14852584-14853058,14853116-14855754
          Length = 1037

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -3

Query: 440 VPCHIS---SCINHTYIGTCSLKSSQNGPGYPIANNRNTK 330
           VP H+S   S  +H    TC+++   N PG P +N+ N K
Sbjct: 542 VPFHVSTVKSVTSHQDNRTCTIRIFFNVPGMPFSNDSNLK 581


>04_01_0106 + 1102880-1105691,1105781-1105806
          Length = 945

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 556 INYLPQRVEFLKSYTGHHLIGLRN 627
           + YLPQ +EFLKS    +L+G+ +
Sbjct: 874 LEYLPQGMEFLKSVEEFNLVGMHH 897


>01_03_0146 +
           13120727-13121037,13121063-13121912,13122854-13123561,
           13123596-13123943
          Length = 738

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 43  SGDSKDISNRRPPPLXYIVL*NWMFLFVQMCN*IELVYPLEQW 171
           SGD      +  PPL Y++   W+   + +C      YPLE W
Sbjct: 123 SGDVSVDGQKVRPPLEYLLKYIWLIYLIVVC------YPLEDW 159


>01_07_0104 +
           41101909-41102017,41103490-41103568,41103663-41103753,
           41103936-41103962
          Length = 101

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 487 HYVFHS*RWLEDRSGSYFTATIQINYLPQRVEFLKSYTG 603
           H +  S  W+ D+S + F      +Y   R+EFL  Y G
Sbjct: 30  HRLLFSAGWISDKSNNQFRTNHGHHYQHIRIEFLFQYGG 68


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,110,226
Number of Sequences: 37544
Number of extensions: 380819
Number of successful extensions: 854
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)