Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_M07
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37429-14|AAN63415.1| 400|Caenorhabditis elegans Hypothetical p... 120 7e-28
U39649-1|AAA80383.2| 437|Caenorhabditis elegans Temporarily ass... 42 4e-04
U97009-8|AAC69032.1| 534|Caenorhabditis elegans Udp-glucuronosy... 30 1.2
AL132949-10|CAB61082.1| 721|Caenorhabditis elegans Hypothetical... 29 2.2
AF016688-2|AAB66078.1| 649|Caenorhabditis elegans Hypothetical ... 29 2.2
U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical pr... 29 2.9
U97009-12|ABR92602.1| 532|Caenorhabditis elegans Udp-glucuronos... 29 3.8
U97009-11|AAC69026.1| 533|Caenorhabditis elegans Udp-glucuronos... 29 3.8
U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF125959-3|AAD14731.1| 531|Caenorhabditis elegans Udp-glucurono... 28 6.7
U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of ... 27 8.8
U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of ... 27 8.8
U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of ... 27 8.8
AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gat... 27 8.8
AF125959-2|AAD14732.1| 531|Caenorhabditis elegans Udp-glucurono... 27 8.8
>U37429-14|AAN63415.1| 400|Caenorhabditis elegans Hypothetical
protein F09E5.2 protein.
Length = 400
Score = 120 bits (290), Expect = 7e-28
Identities = 64/159 (40%), Positives = 85/159 (53%)
Frame = +3
Query: 168 MVKILFLHPDLGIGGAERLVVDAALAFQKKGHEVAFYTNHHDPTHCFAETRDGTFRVTVV 347
MV++ LHPDLGIGGAERL+VDAA+ Q +GH V +TN + +HCF ET D + V
Sbjct: 1 MVRVTILHPDLGIGGAERLIVDAAVGLQDRGHSVRIFTNQYSRSHCFQETLD--LDICTV 58
Query: 348 GDWIPRSILGRFKXXXXXXXXXXXXXXXXXXXXPNEEPLLIFCDSISLCIPFLKMARGPF 527
WIPRSI G+ + +I DS+S F+
Sbjct: 59 VPWIPRSIFGKGHALCAYLKMIIAALYIVIYHKDTD---VILSDSVSAS-QFVLRHFSKA 114
Query: 528 RVIFYCHHPDKLLTSEGGILKKLYRAPLNWLEELTTAKA 644
+++FYCH PD+LLT G LK YR ++W+EE TT A
Sbjct: 115 KLVFYCHFPDRLLTKRDGNLKAFYRNIIDWIEEYTTGLA 153
>U39649-1|AAA80383.2| 437|Caenorhabditis elegans Temporarily
assigned gene nameprotein 249 protein.
Length = 437
Score = 41.9 bits (94), Expect = 4e-04
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 5/155 (3%)
Frame = +3
Query: 177 ILFLHPDLGIGGAERLVVDAALAFQKKGHEVAFYTNHHDP---THCF--AETRDGTFRVT 341
++ +HP+ GG++R V F +GH V + T D H F E R+ ++
Sbjct: 3 VVIVHPEQWNGGSDRCTVALIRHFVSQGHRVTWLTTMIDEYWKNHTFDGVEIREVGLKLH 62
Query: 342 VVGDWIPRSILGRFKXXXXXXXXXXXXXXXXXXXXPNEEPLLIFCDSISLCIPFLKMARG 521
GDW +++ N P + D + C+P +K
Sbjct: 63 P-GDWWSQNVA-----------------LGWHMVFSNLNPDVAIIDHSASCVPMIKWRFP 104
Query: 522 PFRVIFYCHHPDKLLTSEGGILKKLYRAPLNWLEE 626
+++FYCH P +L+T L + Y + +EE
Sbjct: 105 QCKILFYCHFPQQLVTPSRFFLYRWYAKLIGIVEE 139
>U97009-8|AAC69032.1| 534|Caenorhabditis elegans
Udp-glucuronosyltransferase protein12 protein.
Length = 534
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 349 AIGYPGPFWEDLRLHVPIYV 408
AIG P PFW+DL PIY+
Sbjct: 235 AIGRPVPFWKDLVKQSPIYI 254
>AL132949-10|CAB61082.1| 721|Caenorhabditis elegans Hypothetical
protein Y53F4B.12 protein.
Length = 721
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = -3
Query: 335 TKCTITCFGKAMRWIVMVCVESNFVTFLLKRQCGIDYKSLSTADTQVWMKKKYFHHCSRG 156
T C + C ++R + +CV VT L+ C + + +D + W+K ++FH +G
Sbjct: 171 TLCLLLC---SLRVVGTICVSLLAVTLLIAASCTM--VAFFHSDPENWIKAEFFHFGYQG 225
Query: 155 YTSSI 141
+I
Sbjct: 226 VLYAI 230
>AF016688-2|AAB66078.1| 649|Caenorhabditis elegans Hypothetical
protein F18A12.6 protein.
Length = 649
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 276 YTNHHDPTHCFAETRDGTFRV-TVVGDWIPRSILGR 380
Y N+ DP H + +GT+ + +VGDW+ R + R
Sbjct: 528 YDNYDDPDH--GKQMNGTYCIGEIVGDWVGRDVTWR 561
>U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical
protein M02B7.5 protein.
Length = 640
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 164 NNGENTFSSSRLGYRRC*ATCSRCRIGVSEERSRSCFLHKPSRSN 298
+N ++ S RLG RR A SRC +E S +L +PS N
Sbjct: 137 SNMIDSLMSPRLGNRRFGAAASRCAPAAAELTSTEVWLPRPSLVN 181
>U97009-12|ABR92602.1| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform b protein.
Length = 532
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 349 AIGYPGPFWEDLRLHVPIYV 408
AIG+P P W DL PIY+
Sbjct: 233 AIGHPVPHWRDLVKESPIYI 252
>U97009-11|AAC69026.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform a protein.
Length = 533
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 349 AIGYPGPFWEDLRLHVPIYV 408
AIG+P P W DL PIY+
Sbjct: 234 AIGHPVPHWRDLVKESPIYI 253
>U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical
protein B0495.2 protein.
Length = 719
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -2
Query: 357 SNRQQP*HEMYHHVFRQSNALDRDGLCRKQLRDLSSETPM-RHRLQVAQHRRYPSLDEEK 181
S R Q HE HH + + D R RD SSE +H+ + +H++ + +
Sbjct: 123 SGRDQKVHEHRHHHHHRKHETDGHRTNRSN-RDRSSERDSEKHKRHIDRHKKSSTTSPDN 181
Query: 180 VFSPLFKRIH 151
SP K H
Sbjct: 182 DKSPHKKSKH 191
>AF125959-3|AAD14731.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein14 protein.
Length = 531
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 349 AIGYPGPFWEDLRLHVPIYV 408
A+G+P P W DL PIY+
Sbjct: 232 ALGHPVPHWRDLVKESPIYI 251
>U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform c protein.
Length = 442
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 280 QTITIQR-IALPKHVMVHFVLRLLAIGYPGPFWEDLRL 390
+ +T+ + I LP MVH+ + + YP +W+ L++
Sbjct: 194 EAVTLMKPIQLPDFDMVHYSTKKETLLYPNGYWDQLQV 231
>U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform a protein.
Length = 489
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 280 QTITIQR-IALPKHVMVHFVLRLLAIGYPGPFWEDLRL 390
+ +T+ + I LP MVH+ + + YP +W+ L++
Sbjct: 194 EAVTLMKPIQLPDFDMVHYSTKKETLLYPNGYWDQLQV 231
>U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform b protein.
Length = 475
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 280 QTITIQR-IALPKHVMVHFVLRLLAIGYPGPFWEDLRL 390
+ +T+ + I LP MVH+ + + YP +W+ L++
Sbjct: 194 EAVTLMKPIQLPDFDMVHYSTKKETLLYPNGYWDQLQV 231
>AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gated
chloride channel protein.
Length = 489
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 280 QTITIQR-IALPKHVMVHFVLRLLAIGYPGPFWEDLRL 390
+ +T+ + I LP MVH+ + + YP +W+ L++
Sbjct: 194 EAVTLMKPIQLPDFDMVHYSTKKETLLYPNGYWDQLQV 231
>AF125959-2|AAD14732.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein8 protein.
Length = 531
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 349 AIGYPGPFWEDLRLHVPIY 405
A+G P P+W+DL P+Y
Sbjct: 234 AVGRPLPYWKDLIKEAPVY 252
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,690,380
Number of Sequences: 27780
Number of extensions: 345633
Number of successful extensions: 878
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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