Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_M06
         (310 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical pr...    47   2e-06
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr...    26   6.2  
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr...    26   6.2  
AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical...    26   6.2  
AL021497-10|CAD56614.1|  490|Caenorhabditis elegans Hypothetical...    26   6.2  
AL021497-9|CAA16397.1|  487|Caenorhabditis elegans Hypothetical ...    26   6.2  
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.     26   6.2  
AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical ...    26   6.2  

>Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical
           protein C06B8.8 protein.
          Length = 70

 Score = 47.2 bits (107), Expect = 2e-06
 Identities = 23/29 (79%), Positives = 23/29 (79%)
 Frame = +3

Query: 18  KTF*XKARRKDAKSVKIKKNPENVKFKVR 104
           K F  KARRKDAKSVKIKKN  N KFKVR
Sbjct: 9   KDFLVKARRKDAKSVKIKKNSNNTKFKVR 37



 Score = 44.0 bits (99), Expect = 2e-05
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +1

Query: 136 ITDKEKAEKLKQSLPPGLQVKEGK 207
           + DK+KAEKLKQSLPPG+QVKE K
Sbjct: 47  VADKDKAEKLKQSLPPGIQVKELK 70


>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical
           protein C09D8.1a protein.
          Length = 2180

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 206 LPSLTWRPGGKLCLSFSAFSLSVMXQGVXGTLEXSNLELD 87
           LPS+ WR  GK     +  S+  +  G+  TL    + LD
Sbjct: 76  LPSVIWRVNGKSITDHNRISIKSLATGL-STLRFERVSLD 114


>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical
           protein C09D8.1a protein.
          Length = 2180

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 206 LPSLTWRPGGKLCLSFSAFSLSVMXQGVXGTLEXSNLELD 87
           LPS+ WR  GK     +  S+  +  G+  TL    + LD
Sbjct: 76  LPSVIWRVNGKSITDHNRISIKSLATGL-STLRFERVSLD 114


>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
           protein Y75B8A.26 protein.
          Length = 1144

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = +3

Query: 6   SKISKT---F*XKARRKDAKSVKIKKNPENVKFKVRXLKGSXYTL 131
           S+I +T   F  K+R+ + K  K++KN ENV  ++  +K S Y L
Sbjct: 515 SQIDRTNSHFSEKSRKSEEKPQKVEKNVENV--QLGRVKKSVYQL 557


>AL021497-10|CAD56614.1|  490|Caenorhabditis elegans Hypothetical
           protein Y51A2D.13b protein.
          Length = 490

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +2

Query: 65  NKEEP*ECQVQGSXAQGFLXHPGSSLTK-RRLRNLSRVYLQV 187
           NKE P E QVQG+ AQ ++      L   RR  +L  +  ++
Sbjct: 253 NKEYPLEMQVQGAKAQVYIATSPKELNNPRRTWDLDAIVSEI 294


>AL021497-9|CAA16397.1|  487|Caenorhabditis elegans Hypothetical
           protein Y51A2D.13a protein.
          Length = 487

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +2

Query: 65  NKEEP*ECQVQGSXAQGFLXHPGSSLTK-RRLRNLSRVYLQV 187
           NKE P E QVQG+ AQ ++      L   RR  +L  +  ++
Sbjct: 250 NKEYPLEMQVQGAKAQVYIATSPKELNNPRRTWDLDAIVSEI 291


>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
          Length = 2200

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 206 LPSLTWRPGGKLCLSFSAFSLSVMXQGVXGTLEXSNLELD 87
           LPS+ WR  GK     +  S+  +  G+  TL    + LD
Sbjct: 76  LPSVIWRVNGKSITDHNRISIKSLATGL-STLRFERVSLD 114


>AC091267-2|AAK31564.2| 1133|Caenorhabditis elegans Hypothetical
            protein Y37B11A.2 protein.
          Length = 1133

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 106  CSRVPXTPWXITDKEKAEKLKQSL 177
            CSR+  TPW I  ++  E+L  +L
Sbjct: 1046 CSRIGKTPWCIECEQNPEELALAL 1069


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,927,181
Number of Sequences: 27780
Number of extensions: 51925
Number of successful extensions: 135
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)