Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_M04
         (653 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128755-1|BAC87600.1| 1246|Homo sapiens protein ( Homo sapiens ...    99   7e-21
AB067469-1|BAB67775.1| 1176|Homo sapiens KIAA1882 protein protein.     99   7e-21

>AK128755-1|BAC87600.1| 1246|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44832 fis, clone BRACE3047801. ).
          Length = 1246

 Score =   99 bits (238), Expect = 7e-21
 Identities = 52/122 (42%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
 Frame = +1

Query: 223 MSHPDYGQHAQHHACLLVLVKGIGGMLK-NFNKLWERIQRINTIKVTDSAGQVRDIWVRY 399
           MS PDY Q A+ H  LLV+V+ +G + + NF ++++RI  ++ I V DS    R +++RY
Sbjct: 99  MSVPDYMQCAEDHQTLLVVVQPVGIVSEENFFRIYKRICSVSQISVRDSQ---RVLYIRY 155

Query: 400 VRDYPVENNDWGDFQTHRRLLGLITLSKFTNQVELNEVCRVHESLKVKYSNTLYDSRAFM 579
              YP ENN+WGDFQTHR+++GLIT++   +  +  +        K  Y +TLYDSR F+
Sbjct: 156 RHHYPPENNEWGDFQTHRKVVGLITITDCFSAKDWPQTFEKFHVQKEIYGSTLYDSRLFV 215

Query: 580 FG 585
           FG
Sbjct: 216 FG 217


>AB067469-1|BAB67775.1| 1176|Homo sapiens KIAA1882 protein protein.
          Length = 1176

 Score =   99 bits (238), Expect = 7e-21
 Identities = 52/122 (42%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
 Frame = +1

Query: 223 MSHPDYGQHAQHHACLLVLVKGIGGMLK-NFNKLWERIQRINTIKVTDSAGQVRDIWVRY 399
           MS PDY Q A+ H  LLV+V+ +G + + NF ++++RI  ++ I V DS    R +++RY
Sbjct: 29  MSVPDYMQCAEDHQTLLVVVQPVGIVSEENFFRIYKRICSVSQISVRDSQ---RVLYIRY 85

Query: 400 VRDYPVENNDWGDFQTHRRLLGLITLSKFTNQVELNEVCRVHESLKVKYSNTLYDSRAFM 579
              YP ENN+WGDFQTHR+++GLIT++   +  +  +        K  Y +TLYDSR F+
Sbjct: 86  RHHYPPENNEWGDFQTHRKVVGLITITDCFSAKDWPQTFEKFHVQKEIYGSTLYDSRLFV 145

Query: 580 FG 585
           FG
Sbjct: 146 FG 147


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,625,061
Number of Sequences: 237096
Number of extensions: 1988024
Number of successful extensions: 3295
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3291
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)