Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_M04
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80445-1|AAB37794.1| 855|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 29 2.9
U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g ... 29 2.9
U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g ... 29 2.9
AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein. 29 2.9
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 29 2.9
AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protei... 29 2.9
U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 29 3.8
CU457741-8|CAM36349.1| 544|Caenorhabditis elegans Hypothetical ... 28 5.0
>U80445-1|AAB37794.1| 855|Caenorhabditis elegans Hypothetical
protein C50F2.3 protein.
Length = 855
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 307 NFNKLWERIQR-INTIKVTDSAGQVRDIWVRYVRDYPVENNDWGDFQTHRRLLGLITLSK 483
N+NK E + + ++ G+VRD+W+ + Y E+N GD R+ +S+
Sbjct: 376 NYNKQIETFKEAVKSVNPKIQVGKVRDLWIGLAKLY--EDN--GDLDAARKTFETAVISQ 431
Query: 484 FTNQVELNEVCRVHESLKVKY 546
F EL V + +++K+
Sbjct: 432 FGGVSELANVWCAYAEMEMKH 452
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -1
Query: 164 SFDYSVFTXCGACVM*SVFCIHSETKLIAGDLFWILFIFVYVAIFLGVLTVSR 6
S D +F C C V IH T D F FI+ ++ +G+ V+R
Sbjct: 2068 SHDDKLFVPCSGCTSGDVIIIHKCTCAYHNDTFSDKFIYANTSLPVGIDKVTR 2120
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -1
Query: 164 SFDYSVFTXCGACVM*SVFCIHSETKLIAGDLFWILFIFVYVAIFLGVLTVSR 6
S D +F C C V IH T D F FI+ ++ +G+ V+R
Sbjct: 2068 SHDDKLFVPCSGCTSGDVIIIHKCTCAYHNDTFSDKFIYANTSLPVGIDKVTR 2120
>U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform b protein.
Length = 782
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 201 SRPRRICDVSSRLWAARPTSRMPSSARQGNRRHVEKFQ*TLGANTENQHY 350
+RP +C S + RP+S+ SS+RQ +R E ++ L N + +
Sbjct: 286 ARPTSVCSYVSAVLCHRPSSQSSSSSRQYRQRPDECYRTRLVTNCNSPSF 335
>U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform a protein.
Length = 819
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 201 SRPRRICDVSSRLWAARPTSRMPSSARQGNRRHVEKFQ*TLGANTENQHY 350
+RP +C S + RP+S+ SS+RQ +R E ++ L N + +
Sbjct: 323 ARPTSVCSYVSAVLCHRPSSQSSSSSRQYRQRPDECYRTRLVTNCNSPSF 372
>AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein.
Length = 819
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 201 SRPRRICDVSSRLWAARPTSRMPSSARQGNRRHVEKFQ*TLGANTENQHY 350
+RP +C S + RP+S+ SS+RQ +R E ++ L N + +
Sbjct: 323 ARPTSVCSYVSAVLCHRPSSQSSSSSRQYRQRPDECYRTRLVTNCNSPSF 372
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -1
Query: 164 SFDYSVFTXCGACVM*SVFCIHSETKLIAGDLFWILFIFVYVAIFLGVLTVSR 6
S D +F C C V IH T D F FI+ ++ +G+ V+R
Sbjct: 2068 SHDDKLFVPCSGCTSGDVIIIHKCTCAYHNDTFSDKFIYANTSLPVGIDKVTR 2120
>AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protein
protein.
Length = 782
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 201 SRPRRICDVSSRLWAARPTSRMPSSARQGNRRHVEKFQ*TLGANTENQHY 350
+RP +C S + RP+S+ SS+RQ +R E ++ L N + +
Sbjct: 286 ARPTSVCSYVSAVLCHRPSSQSSSSSRQYRQRPDECYRTRLVTNCNSPSF 335
>U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical
protein F16F9.1 protein.
Length = 157
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 104 IHSETKLIAGDLFWILFIFVYVAIF 30
+H+ K + G L WI+FI V + F
Sbjct: 100 VHTLPKFVIGSLTWIVFILVLICFF 124
>CU457741-8|CAM36349.1| 544|Caenorhabditis elegans Hypothetical
protein C42C1.8 protein.
Length = 544
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -3
Query: 432 PIIILNRVVSDIAYPYISYLPCGVS 358
PI +L + ++ +AYP+I +LP +S
Sbjct: 181 PICLLGQSIAAMAYPFIMFLPSKIS 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,117,254
Number of Sequences: 27780
Number of extensions: 317788
Number of successful extensions: 847
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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