Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_M03
(609 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11 pro... 273 4e-73
BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11 p... 273 4e-73
AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11 p... 273 4e-73
AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11 p... 273 4e-73
AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen ... 273 4e-73
AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11 p... 273 4e-73
AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting ... 271 1e-72
X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11 pro... 263 3e-70
AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11 p... 244 1e-64
AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11 p... 75 2e-13
AB065800-1|BAC06019.1| 325|Homo sapiens seven transmembrane hel... 36 0.11
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 33 1.0
AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens ... 33 1.0
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 33 1.0
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 33 1.0
U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subu... 31 2.4
U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor cGMP-p... 31 2.4
AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C, c... 31 2.4
AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C, c... 31 2.4
>L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 273 bits (669), Expect = 4e-73
Identities = 128/150 (85%), Positives = 137/150 (91%)
Frame = +2
Query: 98 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 277
N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 69
Query: 278 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 457
VHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLD
Sbjct: 70 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 129
Query: 458 FYVVLGRPGFNVXHXXXKTGKVGFPHRLTK 547
FYVVLGRPGF++ +TG +G HR++K
Sbjct: 130 FYVVLGRPGFSIADKKRRTGCIGAKHRISK 159
Score = 36.3 bits (80), Expect = 0.084
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 546 REDAMKWFPQKYDGIILNSK 605
+E+AM+WF QKYDGIIL K
Sbjct: 159 KEEAMRWFQQKYDGIILPGK 178
>BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 273 bits (669), Expect = 4e-73
Identities = 128/150 (85%), Positives = 137/150 (91%)
Frame = +2
Query: 98 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 277
N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 9 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 68
Query: 278 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 457
VHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLD
Sbjct: 69 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 128
Query: 458 FYVVLGRPGFNVXHXXXKTGKVGFPHRLTK 547
FYVVLGRPGF++ +TG +G HR++K
Sbjct: 129 FYVVLGRPGFSIADKKRRTGCIGAKHRISK 158
Score = 36.3 bits (80), Expect = 0.084
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 546 REDAMKWFPQKYDGIILNSK 605
+E+AM+WF QKYDGIIL K
Sbjct: 158 KEEAMRWFQQKYDGIILPGK 177
>AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11
protein.
Length = 174
Score = 273 bits (669), Expect = 4e-73
Identities = 128/150 (85%), Positives = 137/150 (91%)
Frame = +2
Query: 98 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 277
N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 8 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 67
Query: 278 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 457
VHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLD
Sbjct: 68 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 127
Query: 458 FYVVLGRPGFNVXHXXXKTGKVGFPHRLTK 547
FYVVLGRPGF++ +TG +G HR++K
Sbjct: 128 FYVVLGRPGFSIADKKRRTGCIGAKHRISK 157
>AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 273 bits (669), Expect = 4e-73
Identities = 128/150 (85%), Positives = 137/150 (91%)
Frame = +2
Query: 98 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 277
N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 69
Query: 278 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 457
VHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLD
Sbjct: 70 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 129
Query: 458 FYVVLGRPGFNVXHXXXKTGKVGFPHRLTK 547
FYVVLGRPGF++ +TG +G HR++K
Sbjct: 130 FYVVLGRPGFSIADKKRRTGCIGAKHRISK 159
Score = 36.3 bits (80), Expect = 0.084
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 546 REDAMKWFPQKYDGIILNSK 605
+E+AM+WF QKYDGIIL K
Sbjct: 159 KEEAMRWFQQKYDGIILPGK 178
>AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen
KW-12 protein.
Length = 176
Score = 273 bits (669), Expect = 4e-73
Identities = 128/150 (85%), Positives = 137/150 (91%)
Frame = +2
Query: 98 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 277
N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 8 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 67
Query: 278 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 457
VHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLD
Sbjct: 68 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 127
Query: 458 FYVVLGRPGFNVXHXXXKTGKVGFPHRLTK 547
FYVVLGRPGF++ +TG +G HR++K
Sbjct: 128 FYVVLGRPGFSIADKKRRTGCIGAKHRISK 157
Score = 36.3 bits (80), Expect = 0.084
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 546 REDAMKWFPQKYDGIILNSK 605
+E+AM+WF QKYDGIIL K
Sbjct: 157 KEEAMRWFQQKYDGIILPGK 176
>AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 273 bits (669), Expect = 4e-73
Identities = 128/150 (85%), Positives = 137/150 (91%)
Frame = +2
Query: 98 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 277
N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 9 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 68
Query: 278 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 457
VHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLD
Sbjct: 69 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 128
Query: 458 FYVVLGRPGFNVXHXXXKTGKVGFPHRLTK 547
FYVVLGRPGF++ +TG +G HR++K
Sbjct: 129 FYVVLGRPGFSIADKKRRTGCIGAKHRISK 158
Score = 36.3 bits (80), Expect = 0.084
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 546 REDAMKWFPQKYDGIILNSK 605
+E+AM+WF QKYDGIIL K
Sbjct: 158 KEEAMRWFQQKYDGIILPGK 177
>AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting
protein 34 protein.
Length = 177
Score = 271 bits (664), Expect = 1e-72
Identities = 127/150 (84%), Positives = 136/150 (90%)
Frame = +2
Query: 98 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 277
N MR L IRKLCLNICVGESGDRL RAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 9 NPMRELRIRKLCLNICVGESGDRLARAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 68
Query: 278 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 457
VHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLD
Sbjct: 69 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 128
Query: 458 FYVVLGRPGFNVXHXXXKTGKVGFPHRLTK 547
FYVVLGRPGF++ +TG +G HR++K
Sbjct: 129 FYVVLGRPGFSIADKKRRTGCIGAKHRISK 158
Score = 36.3 bits (80), Expect = 0.084
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 546 REDAMKWFPQKYDGIILNSK 605
+E+AM+WF QKYDGIIL K
Sbjct: 158 KEEAMRWFQQKYDGIILPGK 177
>X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 263 bits (645), Expect = 3e-70
Identities = 124/150 (82%), Positives = 134/150 (89%)
Frame = +2
Query: 98 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 277
N MR L IRKLCLNICVGESG RLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 10 NPMRELRIRKLCLNICVGESGGRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 69
Query: 278 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 457
VHC VRGAKAEEILE+GLKVRE ELR++NFS TGNFGFGIQEHIDLGI+YDPSIGIYGLD
Sbjct: 70 VHCAVRGAKAEEILEKGLKVRELELRKNNFSDTGNFGFGIQEHIDLGIEYDPSIGIYGLD 129
Query: 458 FYVVLGRPGFNVXHXXXKTGKVGFPHRLTK 547
FYVVLGRPGF++ +TG +G HR++K
Sbjct: 130 FYVVLGRPGFSIADKKRRTGCIGAKHRISK 159
Score = 36.3 bits (80), Expect = 0.084
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 546 REDAMKWFPQKYDGIILNSK 605
+E+AM+WF QKYDGIIL K
Sbjct: 159 KEEAMRWFQQKYDGIILPGK 178
>AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11
protein.
Length = 131
Score = 244 bits (598), Expect = 1e-64
Identities = 116/124 (93%), Positives = 119/124 (95%)
Frame = +2
Query: 98 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 277
N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 8 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 67
Query: 278 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 457
VHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLD
Sbjct: 68 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 127
Query: 458 FYVV 469
FYVV
Sbjct: 128 FYVV 131
>AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11
protein.
Length = 36
Score = 74.9 bits (176), Expect = 2e-13
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +2
Query: 119 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSK 226
IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSK
Sbjct: 1 IRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSK 36
>AB065800-1|BAC06019.1| 325|Homo sapiens seven transmembrane helix
receptor protein.
Length = 325
Score = 35.9 bits (79), Expect = 0.11
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 604 LLLSMIPSYFCGNHFIASSLCEAVGKSHFSCLXXXVXYV 488
LL+ +P FCGNH I + CE +G +H SC + +
Sbjct: 163 LLILRLP--FCGNHVIPHTYCEHMGLAHLSCASIKINII 199
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 32.7 bits (71), Expect = 1.0
Identities = 37/136 (27%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Frame = -1
Query: 531 GNPTFPVLXXXCXTLKPGRXXXXXXXXXXXXIEGSYLIPKSMCS*IPKPKLPVAEKLSRR 352
GNP P +L P G L P S P P L A +
Sbjct: 1705 GNPQGP-FPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPA 1763
Query: 351 NSYSLTFKPLSRISSALAPRTVQWTAIFSLRRIP-----KDRTVYLALENTGCCPVSCSN 187
+++LT P S +S LAP +VQ T S +P +T+ LA +T P S ++
Sbjct: 1764 PAHTLTLAPASSSASLLAPASVQ-TLTLSPAPVPTLGPAAAQTLALAPASTQ-SPASQAS 1821
Query: 186 TLAARVSLSPDSPTQM 139
+L S + P M
Sbjct: 1822 SLVVSASGAAPLPVTM 1837
>AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ44499 fis, clone UTERU3000665, highly similar
to Homo sapiens Snf2-related CBP activator protein
(SRCAP). ).
Length = 559
Score = 32.7 bits (71), Expect = 1.0
Identities = 37/136 (27%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Frame = -1
Query: 531 GNPTFPVLXXXCXTLKPGRXXXXXXXXXXXXIEGSYLIPKSMCS*IPKPKLPVAEKLSRR 352
GNP P +L P G L P S P P L A +
Sbjct: 354 GNPQGP-FPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPA 412
Query: 351 NSYSLTFKPLSRISSALAPRTVQWTAIFSLRRIP-----KDRTVYLALENTGCCPVSCSN 187
+++LT P S +S LAP +VQ T S +P +T+ LA +T P S ++
Sbjct: 413 PAHTLTLAPASSSASLLAPASVQ-TLTLSPAPVPTLGPAAAQTLALAPASTQ-SPASQAS 470
Query: 186 TLAARVSLSPDSPTQM 139
+L S + P M
Sbjct: 471 SLVVSASGAAPLPVTM 486
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 32.7 bits (71), Expect = 1.0
Identities = 37/136 (27%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Frame = -1
Query: 531 GNPTFPVLXXXCXTLKPGRXXXXXXXXXXXXIEGSYLIPKSMCS*IPKPKLPVAEKLSRR 352
GNP P +L P G L P S P P L A +
Sbjct: 1446 GNPQGP-FPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPA 1504
Query: 351 NSYSLTFKPLSRISSALAPRTVQWTAIFSLRRIP-----KDRTVYLALENTGCCPVSCSN 187
+++LT P S +S LAP +VQ T S +P +T+ LA +T P S ++
Sbjct: 1505 PAHTLTLAPASSSASLLAPASVQ-TLTLSPAPVPTLGPAAAQTLALAPASTQ-SPASQAS 1562
Query: 186 TLAARVSLSPDSPTQM 139
+L S + P M
Sbjct: 1563 SLVVSASGAAPLPVTM 1578
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 32.7 bits (71), Expect = 1.0
Identities = 37/136 (27%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Frame = -1
Query: 531 GNPTFPVLXXXCXTLKPGRXXXXXXXXXXXXIEGSYLIPKSMCS*IPKPKLPVAEKLSRR 352
GNP P +L P G L P S P P L A +
Sbjct: 1528 GNPQGP-FPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPA 1586
Query: 351 NSYSLTFKPLSRISSALAPRTVQWTAIFSLRRIP-----KDRTVYLALENTGCCPVSCSN 187
+++LT P S +S LAP +VQ T S +P +T+ LA +T P S ++
Sbjct: 1587 PAHTLTLAPASSSASLLAPASVQ-TLTLSPAPVPTLGPAAAQTLALAPASTQ-SPASQAS 1644
Query: 186 TLAARVSLSPDSPTQM 139
+L S + P M
Sbjct: 1645 SLVVSASGAAPLPVTM 1660
>U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subunit
protein.
Length = 858
Score = 31.5 bits (68), Expect = 2.4
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +2
Query: 98 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 250
+++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 221 SIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor
cGMP-phosphodiesterase alpha' subunit protein.
Length = 858
Score = 31.5 bits (68), Expect = 2.4
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +2
Query: 98 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 250
+++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 221 SIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 31.5 bits (68), Expect = 2.4
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +2
Query: 98 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 250
+++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 221 SIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 31.5 bits (68), Expect = 2.4
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +2
Query: 98 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 250
+++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 221 SIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,648,359
Number of Sequences: 237096
Number of extensions: 1870922
Number of successful extensions: 11297
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11297
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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