Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_M02
         (471 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XW23 Cluster: Putative uncharacterized protein; n=6; ...    34   1.4  
UniRef50_A0Q0L0 Cluster: Membrane protein, putative; n=1; Clostr...    32   7.3  
UniRef50_Q54EC4 Cluster: Putative uncharacterized protein; n=4; ...    31   9.7  
UniRef50_Q6FX38 Cluster: Vacuolar fusion protein CCZ1; n=1; Cand...    31   9.7  

>UniRef50_Q4XW23 Cluster: Putative uncharacterized protein; n=6;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 1154

 Score = 34.3 bits (75), Expect = 1.4
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = -2

Query: 467 FFFSTDNLYSY*ITESKTFKYLKTFKYQFVL*NIFEYLMN 348
           FFFS +NLY Y     K F   K + Y+ +L NIFEY+ N
Sbjct: 639 FFFSINNLYLY----IKIFNKAKIYNYE-ILHNIFEYIYN 673


>UniRef50_A0Q0L0 Cluster: Membrane protein, putative; n=1;
           Clostridium novyi NT|Rep: Membrane protein, putative -
           Clostridium novyi (strain NT)
          Length = 222

 Score = 31.9 bits (69), Expect = 7.3
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +1

Query: 115 IIIYRMYFIWMFIXMF-LIRNSVSNIINQRKRFFVIFII 228
           +++Y MYFIW  +  +   +NS+ N I + +  F +F+I
Sbjct: 78  LMLYNMYFIWKDVNSYNKNKNSIKNYIYKNRFSFFLFVI 116


>UniRef50_Q54EC4 Cluster: Putative uncharacterized protein; n=4;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 349

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
 Frame = -1

Query: 267 NTSLLLIYNLPITDN------EDNKKSFSLIYNIAYTIPN*KHTDKHPDKIHPVYNDFAK 106
           NT L LIY   IT N      +D     S+I  I   I N  + DK+  ++  ++NDF +
Sbjct: 264 NTGLKLIYENRITSNWYYCYQDDESYIGSIIAFIGNFIKNAINGDKN--RVDSIFNDFEQ 321

Query: 105 RILFSYKK--KHYIFNV 61
           R+   YK   K + F+V
Sbjct: 322 RLHLKYKSNPKDFQFHV 338


>UniRef50_Q6FX38 Cluster: Vacuolar fusion protein CCZ1; n=1; Candida
           glabrata|Rep: Vacuolar fusion protein CCZ1 - Candida
           glabrata (Yeast) (Torulopsis glabrata)
          Length = 679

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = -1

Query: 249 IYNLPITDNEDNKKSFSLIYNIAYTIPN*KHTDKHPDKIHPVYNDFA 109
           +Y+LP TDN  NKK+   I N AY I     TDK  +K++  + D +
Sbjct: 447 LYDLPNTDNHSNKKND--ILNFAYLI-----TDKKRNKLYSSFPDLS 486


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,992,465
Number of Sequences: 1657284
Number of extensions: 5801588
Number of successful extensions: 12451
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12441
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)