Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_L23
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 170 1e-42
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 169 1e-42
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 144 4e-35
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 38 0.009
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 36 0.021
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 36 0.037
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 36 0.037
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 32 0.35
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 32 0.35
07_03_1414 - 26403361-26403969 31 0.61
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 31 0.80
07_03_1422 + 26462871-26463434,26463772-26463897 30 1.4
07_03_1413 - 26396426-26396890 30 1.4
02_04_0587 + 24110333-24110584,24111193-24111261,24112347-241128... 28 5.6
09_06_0016 - 20240358-20240797,20241040-20241131,20241132-202412... 27 9.9
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 170 bits (413), Expect = 1e-42
Identities = 84/151 (55%), Positives = 102/151 (67%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 355
NPLFEKRPK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLD
Sbjct: 22 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 81
Query: 356 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 535
K A LFK+L KYRPE +P ++ G N VT L+E
Sbjct: 82 KNLATNLFKMLLKYRPE-DKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIE 140
Query: 536 KKKAQLVVIAHDVDPIELVLFLPALCRKMGV 628
+ KAQLVVIAHDVDPIELV++LPALCRKM V
Sbjct: 141 QSKAQLVVIAHDVDPIELVVWLPALCRKMEV 171
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 169 bits (412), Expect = 1e-42
Identities = 83/151 (54%), Positives = 102/151 (67%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 355
NPLFEKRPK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLD
Sbjct: 6 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 65
Query: 356 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 535
K A LFK+L KYRPE +P ++ G N VT L+E
Sbjct: 66 KNLATNLFKMLLKYRPE-DKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIE 124
Query: 536 KKKAQLVVIAHDVDPIELVLFLPALCRKMGV 628
+ KAQLVVIAHDVDPIELV++LPALCRKM +
Sbjct: 125 QSKAQLVVIAHDVDPIELVVWLPALCRKMEI 155
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 144 bits (350), Expect = 4e-35
Identities = 76/151 (50%), Positives = 98/151 (64%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 355
NPLFEKRPK F IG + P +DL RFVRWPK +RIQRQ+ VL++RLKVPP +NQFT+TLD
Sbjct: 23 NPLFEKRPKQFGIGGALPPRKDLHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTLD 82
Query: 356 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 535
K ++L++ + E +P ++ G + VT L+E
Sbjct: 83 KNLGCQKERLLKRAQAEA-----------------EGKTVEAKKPIVVKYGLDHVTYLIE 125
Query: 536 KKKAQLVVIAHDVDPIELVLFLPALCRKMGV 628
+ KAQLVVIAHDVDPIELV++LPALCRKM +
Sbjct: 126 QSKAQLVVIAHDVDPIELVVWLPALCRKMEI 156
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 497 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 628
++ G N TK + + A+ VV+A D +P+E++L LP L V
Sbjct: 33 LKKGANEATKTLNRGIAEFVVMAADAEPLEILLHLPLLAEDKNV 76
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 497 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 628
++ G N TK + + ++ VV+A D +P+E++L LP L V
Sbjct: 35 LKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNV 78
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 35.5 bits (78), Expect = 0.037
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 506 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVH 631
G K +EK AQL V+A D D + V + ALC + VH
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVH 82
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 35.5 bits (78), Expect = 0.037
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 506 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVH 631
G K +EK AQL V+A D D + V + ALC + VH
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVH 82
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +2
Query: 497 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 628
++ G V K + + + L +IA ++ PI+++ +P LC + +
Sbjct: 45 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANI 88
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 497 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 628
++ G V K + + L VIA ++ PI+++ +P LC + +
Sbjct: 45 LKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANI 88
>07_03_1414 - 26403361-26403969
Length = 202
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -1
Query: 286 ALDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHDLLGLNLFD 146
AL A + P + G++ + + +T G+ L P LEE + GL L+D
Sbjct: 76 ALSAAVSNPGFFFGRMVVFNDPVTEGRALPPSLEETVVRAQGLYLYD 122
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 274 PHPAPEGCTSASSESAPSDQP 336
P PAPE +A+ E+APSD P
Sbjct: 53 PQPAPEEAPAAAEEAAPSDDP 73
>07_03_1422 + 26462871-26463434,26463772-26463897
Length = 229
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 286 ALDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHDLLGLNLFD 146
AL + P Y G+V + + +T G+ L P LEE GL L D
Sbjct: 74 ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 120
>07_03_1413 - 26396426-26396890
Length = 154
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 286 ALDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHDLLGLNLFD 146
AL + P Y G+V + + +T G+ L P LEE GL L D
Sbjct: 28 ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 74
>02_04_0587 +
24110333-24110584,24111193-24111261,24112347-24112850,
24113094-24113336
Length = 355
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3
Query: 221 PDQWQSSLASSRREDSRSSWAQPF*PPMGRR 129
P SSLA +RR +R AQP PP RR
Sbjct: 24 PSSAASSLAFARRAAARPLRAQPLLPPAARR 54
>09_06_0016 -
20240358-20240797,20241040-20241131,20241132-20241250,
20241398-20241561,20241664-20241757,20242048-20242080,
20242361-20242478,20242712-20242812,20242882-20242962,
20243138-20243335,20243411-20243545,20243662-20243667,
20243727-20243805,20243845-20243896,20244328-20244388,
20244475-20244532,20245137-20245225,20246305-20246799
Length = 804
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 460 QER*ASTKEAQYHPIRHKHSHQAGREEEGAACGHR 564
QER A + + H RH H H A + + GHR
Sbjct: 685 QER-ARRRHKRAHSHRHSHHHDAHKRHKTELAGHR 718
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,220,114
Number of Sequences: 37544
Number of extensions: 312182
Number of successful extensions: 1018
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -