Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_L14
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 99 4e-21
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 97 1e-20
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 45 6e-05
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 44 8e-05
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 40 0.002
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 38 0.007
03_01_0249 - 1935355-1935827,1936129-1936330 34 0.11
06_01_0611 + 4420873-4422207 30 1.9
02_04_0633 - 24616563-24617279 30 1.9
10_08_0710 + 20070655-20070990,20071074-20071469 29 2.4
01_01_0735 + 5730783-5733320 29 3.2
11_06_0584 - 25220371-25222917 29 4.3
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 4.3
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 28 5.6
03_06_0642 + 35239658-35240083,35240167-35240238,35240305-352409... 28 7.5
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 28 7.5
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 98.7 bits (235), Expect = 4e-21
Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
Frame = +3
Query: 60 NFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESN 239
N A+KALIAA+Y+G V++ NF G +NK+ +FLK P GK+P E+ +G V ESN
Sbjct: 35 NKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVLETPEGAVF--ESN 92
Query: 240 AIAYYVA----NESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVE 407
AIA YVA N SL G L + + QW +S +E+ W++P LG + E
Sbjct: 93 AIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSATEVDANIGRWLYPRLGFGPYVPVLEE 152
Query: 408 RAKSDLLAALKVLDGHLLTRTFLV 479
A + L +L L+ HL + T+LV
Sbjct: 153 FAITSLKRSLGALNTHLASNTYLV 176
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 490 ITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVGG 636
+TLAD+++ L + F +L S S +V+R+F T+ +QP V G
Sbjct: 180 VTLADIVMTCNLYYGFVRILIKSFTSEFPHVERYFWTMVNQPNFKKVIG 228
>02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 97.1 bits (231), Expect = 1e-20
Identities = 61/153 (39%), Positives = 84/153 (54%), Gaps = 13/153 (8%)
Frame = +3
Query: 60 NFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESN 239
N A+KALIAA+YSG V++A NF G +NK+ ++LK P GKVP E+ DG V ESN
Sbjct: 572 NKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGPVF--ESN 629
Query: 240 AIAYYVANES-------------LRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGI 380
AIA YV + S L G L A + QW +S +E+ + W+FP LG
Sbjct: 630 AIARYVLSSSHFPEVTRSKSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKWLFPRLGF 689
Query: 381 MQFNKQNVERAKSDLLAALKVLDGHLLTRTFLV 479
+ + E A + L +L L+ HL + T+LV
Sbjct: 690 APYVAVSEEAAIAALKRSLGALNTHLASNTYLV 722
Score = 95.5 bits (227), Expect = 3e-20
Identities = 60/153 (39%), Positives = 83/153 (54%), Gaps = 13/153 (8%)
Frame = +3
Query: 60 NFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESN 239
N A+KALIAA+YSG V++ NF G +NK+ +FLK P GK+P E+ DG V ESN
Sbjct: 11 NKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGPVF--ESN 68
Query: 240 AIAYYV-------------ANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGI 380
AIA YV A+ L G L A + QW +S +E+ W++P LGI
Sbjct: 69 AIARYVLSHCHFPEVTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKWLYPRLGI 128
Query: 381 MQFNKQNVERAKSDLLAALKVLDGHLLTRTFLV 479
+ + E A + L +L L+ HL + T+LV
Sbjct: 129 APYVAVSEEAAIAALKRSLGALNTHLASNTYLV 161
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 490 ITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVGGSL 642
+TLAD+++ L F ++ S S +V+R+F T+ +QP V G +
Sbjct: 165 VTLADIVMTCNLYMGFARIMTKSFTSEFPHVERYFWTMVNQPNFKKVLGDV 215
Score = 35.5 bits (78), Expect = 0.037
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 490 ITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVGGSL 642
+TLAD+++ L F ++ + S +V+R+F T+ +QP V G +
Sbjct: 726 VTLADIVMTCNLYMGFARIMTKNFTSEFPHVERYFWTMVNQPNFKKVMGDV 776
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 44.8 bits (101), Expect = 6e-05
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = +3
Query: 81 LIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 257
L+ + +G + VA + GE N+S L + P GK+PAFE DG+V L ES AI YV
Sbjct: 18 LVCLEEAGASYELVAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYV 74
Query: 258 AN-----ESLRGGDLATQARVWQW 314
+ LR G+L A V W
Sbjct: 75 LRNYNKPDLLREGNLEESAMVDMW 98
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 44.4 bits (100), Expect = 8e-05
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Frame = +3
Query: 75 KALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 251
+ L+ + G D + V +F+ GE N S + +++ P GK+PA + DG ++L ES AIA
Sbjct: 17 RVLVCLEEVGADYELVTVDFLAGEQN-SPEHVERNPFGKIPALQ--DGDLVLFESRAIAK 73
Query: 252 YVAN-------ESLRGGDLATQARVWQWASWSDSELLPA------SCAWVFPYLGIMQFN 392
Y+ + LR D+ A V W + PA C +FP + + N
Sbjct: 74 YILRKYKSSKVDLLRESDIREAALVDVWTEVEAHQYYPALSPIVFECI-IFPIMRGVPTN 132
Query: 393 KQNVERAKSDLLAALKVLDGHLLTRTFL 476
+Q V + L L+ + L +L
Sbjct: 133 QQVVHESLEKLKKVLETYEARLSGSRYL 160
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +3
Query: 75 KALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYY 254
+ L+ + G + +V P + +K + + P G+VPAFE DG + L ES AI+ Y
Sbjct: 17 RILVCLEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFE--DGDLTLFESRAISKY 74
Query: 255 V----ANESLRGGDLATQARVWQWASWSDSELLPASCAWVF 365
+ ++ LR +L+ A V W S A +F
Sbjct: 75 ILRKHGSDLLRESNLSESAMVDVWLEVESSHFDGAMSPIIF 115
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 37.9 bits (84), Expect = 0.007
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = +3
Query: 75 KALIAAQYSGTDVKVAPNFVFGET-NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 251
+ L+ + G D ++ + FG+ +K D L + P G+VPAF+ DG ++L ES AI
Sbjct: 17 RVLLCLEEVGADYEIV-DVDFGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICR 73
Query: 252 YVANES--------LRGGDLATQARVWQW 314
Y+ + LR GD + A V W
Sbjct: 74 YILRKHRATDEANLLREGDPSESAVVDAW 102
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 147 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQAR 302
+KS FLK P G+VPAF+ D + ES AI Y+ ++ G+ R
Sbjct: 42 HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQYADSGNKTLMGR 91
>06_01_0611 + 4420873-4422207
Length = 444
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +3
Query: 564 FVADKRSAL-----VPDRRPPATSVGRRRLAHALC 653
+V D+ +AL P RRPPA S RRRLA + C
Sbjct: 279 YVMDEHAALRVAVRTPKRRPPARSRSRRRLALSEC 313
>02_04_0633 - 24616563-24617279
Length = 238
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 238 MPSLTTLPMKVSAEEIWLPKPVSGSGHHGLTVNYC 342
MP+ TT+ M+ S + W P+ G HG VN+C
Sbjct: 1 MPAATTIQMEASPADHWSPRHRRRCGCHG--VNWC 33
>10_08_0710 + 20070655-20070990,20071074-20071469
Length = 243
Score = 29.5 bits (63), Expect = 2.4
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +3
Query: 147 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV------ANESLRGGDLATQARVW 308
NKSE L P K +GK + ES I YV A ESL D +A
Sbjct: 45 NKSELLLSSNPVHKKVPVLIHNGKPIC-ESQIIVEYVDEAFPDAGESLLPSDPYDRAVAR 103
Query: 309 QWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLD 449
WA++ + + +P AW LG+ + K A +LAA++ L+
Sbjct: 104 FWAAYINDKFMP---AWQKASLGLTEEEK---AEAVKQMLAAIENLE 144
>01_01_0735 + 5730783-5733320
Length = 845
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 122 TEFRIWRDQQVRRLLEEVSCRKSACIRKCRWKSA 223
T F +W D + + +E SC+K C+ C K+A
Sbjct: 372 TYFHLWGDSRGAPMTDEESCKKD-CLSNCSCKAA 404
>11_06_0584 - 25220371-25222917
Length = 848
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 415 FARSTFCLLNCMIPR*GKTQAQEAGSSSLSD 323
+ +ST C C +PR K +AG S+++D
Sbjct: 408 WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 162 FLKKFPAGKVPAFESADGK 218
FLK P GKVP F DGK
Sbjct: 49 FLKISPEGKVPVFNGGDGK 67
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 475 RKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEAGSSSLS 326
+K RVR PSST ++A+RS C + + + A+ SS LS
Sbjct: 425 KKARVRPSPSSTLRSANRSTAGTLVVCPASVLRQWASELAAKVTESSKLS 474
>03_06_0642 +
35239658-35240083,35240167-35240238,35240305-35240919,
35241253-35241435,35241604-35241663,35241733-35241936,
35242497-35242745,35243609-35243707,35243760-35243858,
35244463-35244480,35244668-35244862,35244981-35245073,
35245265-35245531,35245884-35246102
Length = 932
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = +3
Query: 540 ARAR-PERPFVADKRSA---LVPDRRPPATSVGRRR 635
+RAR P PF + RS+ PDRRPP T R R
Sbjct: 28 SRARTPRAPFPSTSRSSNPYSFPDRRPPPTPRSRSR 63
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -2
Query: 409 RSTFCLLNCMIPR*GKTQAQEAGSSSLSDHDAHCQTRAWV 290
R T C NC+I + T Q + + C+T WV
Sbjct: 470 RKTICRTNCLICKGTSTSEQNSEDENPDSSRTACETPKWV 509
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,226,562
Number of Sequences: 37544
Number of extensions: 457550
Number of successful extensions: 1387
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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