Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_L09
(650 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9H1K1 Cluster: Iron-sulfur cluster assembly enzyme ISC... 180 3e-44
UniRef50_Q6CFQ0 Cluster: Iron sulfur cluster assembly protein 1,... 157 2e-37
UniRef50_A2QHV4 Cluster: Remark: alternate names for S. cerevisi... 149 6e-35
UniRef50_Q4WNS3 Cluster: Iron-sulfur cofactor synthesis protein ... 148 1e-34
UniRef50_Q9UTC6 Cluster: Iron sulfur cluster assembly protein 1,... 144 2e-33
UniRef50_Q6E0I7 Cluster: Iron-sulfur cluster assembly protein; n... 142 5e-33
UniRef50_Q7QTV3 Cluster: GLP_76_35055_35693; n=4; Eukaryota|Rep:... 140 3e-32
UniRef50_Q4N9C2 Cluster: NifU protein, putative; n=11; cellular ... 128 1e-28
UniRef50_Q0CL81 Cluster: Iron sulfur cluster assembly protein 1,... 122 1e-26
UniRef50_Q896F6 Cluster: NifU protein; n=7; cellular organisms|R... 119 5e-26
UniRef50_UPI0000E4A7B0 Cluster: PREDICTED: similar to NifU-like ... 119 7e-26
UniRef50_Q38DM2 Cluster: Iron-sulfur cluster assembly protein, p... 118 1e-25
UniRef50_Q8TME1 Cluster: NifU protein; n=24; cellular organisms|... 112 8e-24
UniRef50_A4LX66 Cluster: Fe-S cluster assembly protein NifU; n=2... 109 7e-23
UniRef50_P05340 Cluster: Nitrogen fixation protein nifU; n=17; B... 109 7e-23
UniRef50_P20628 Cluster: Nitrogen fixation protein nifU; n=24; B... 108 1e-22
UniRef50_O34393 Cluster: NifU protein; n=24; cellular organisms|... 102 9e-21
UniRef50_O67045 Cluster: NifU-like protein; n=4; cellular organi... 100 3e-20
UniRef50_A6DAA5 Cluster: NifU family protein; n=2; Caminibacter ... 100 3e-20
UniRef50_Q2LWE9 Cluster: NifU-like protein involved in Fe-S clus... 99 1e-19
UniRef50_Q8KB04 Cluster: IscU protein; n=10; Chlorobiaceae|Rep: ... 97 4e-19
UniRef50_Q8TSI9 Cluster: NifU family protein; n=5; Methanomicrob... 95 1e-18
UniRef50_Q7M7M7 Cluster: NIFU-LIKE PROTEIN; n=27; cellular organ... 94 3e-18
UniRef50_P05343 Cluster: Nitrogen fixation protein nifU; n=4; Pr... 92 9e-18
UniRef50_Q2RIL0 Cluster: Nitrogen-fixing NifU-like; n=3; Clostri... 91 2e-17
UniRef50_Q3ZXT4 Cluster: NifU domain protein; n=3; Dehalococcoid... 89 6e-17
UniRef50_A2ZW89 Cluster: Putative uncharacterized protein; n=1; ... 88 1e-16
UniRef50_Q4UGE0 Cluster: RNaseP-like protein with Nifu domain, p... 85 2e-15
UniRef50_Q07HZ2 Cluster: Nitrogen-fixing NifU domain protein; n=... 82 1e-14
UniRef50_A4J289 Cluster: Nitrogen-fixing NifU domain protein; n=... 82 1e-14
UniRef50_Q74DA8 Cluster: NifU-like domain protein; n=2; Desulfur... 81 3e-14
UniRef50_Q3A8K8 Cluster: NifU-like protein; n=3; Desulfuromonada... 78 2e-13
UniRef50_A5D4Q3 Cluster: NifU homolog; n=1; Pelotomaculum thermo... 75 1e-12
UniRef50_A1AQD6 Cluster: Nitrogen-fixing NifU domain protein; n=... 73 5e-12
UniRef50_A0LFU2 Cluster: Nitrogen-fixing NifU domain protein; n=... 73 6e-12
UniRef50_Q023P2 Cluster: Nitrogen-fixing NifU domain protein; n=... 66 7e-10
UniRef50_A7DRZ9 Cluster: SUF system FeS assembly protein, NifU f... 66 7e-10
UniRef50_Q98AM0 Cluster: Nitrogen fixation protein; NifU; n=2; M... 65 1e-09
UniRef50_Q8F7C7 Cluster: NifU-like protein; n=4; Leptospira|Rep:... 63 6e-09
UniRef50_Q1AWB1 Cluster: TRNA (5-methylaminomethyl-2-thiouridyla... 62 1e-08
UniRef50_Q8TGK9 Cluster: Uncharacterized protein YPL135C-A; n=2;... 60 5e-08
UniRef50_A0RXA5 Cluster: Fe-S cluster formation protein; n=1; Ce... 58 1e-07
UniRef50_A6Q4J9 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_A5UR74 Cluster: SUF system FeS assembly protein, NifU f... 57 4e-07
UniRef50_Q97E24 Cluster: NifU homolog involved in Fe-S cluster f... 56 1e-06
UniRef50_A0LFS6 Cluster: Nitrogen-fixing NifU domain protein; n=... 55 1e-06
UniRef50_Q1IN98 Cluster: Nitrogen-fixing NifU-like; n=1; Acidoba... 54 2e-06
UniRef50_A1SV02 Cluster: SUF system FeS assembly protein, NifU f... 54 3e-06
UniRef50_Q3E456 Cluster: Nitrogen-fixing NifU-like, N-terminal; ... 54 4e-06
UniRef50_Q7MYK4 Cluster: Similarities with nitrogen fixation pro... 53 7e-06
UniRef50_A7D1I7 Cluster: SUF system FeS assembly protein, NifU f... 53 7e-06
UniRef50_Q7UU01 Cluster: Nitrogen fixation protein NifU; n=1; Pi... 52 9e-06
UniRef50_Q6APN8 Cluster: Related to nitrogen fixation protein; n... 52 1e-05
UniRef50_Q1V2E5 Cluster: Putative nifU-like protein; n=2; Candid... 52 2e-05
UniRef50_Q1JIL3 Cluster: IscU protein; n=11; Streptococcus pyoge... 52 2e-05
UniRef50_Q62LM3 Cluster: NifU-like domain protein; n=14; Burkhol... 51 2e-05
UniRef50_Q2JCF1 Cluster: SUF system FeS assembly protein; n=37; ... 51 2e-05
UniRef50_Q83CI7 Cluster: NifU family protein; n=2; Coxiella burn... 51 3e-05
UniRef50_A4BSU8 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_Q2JUE7 Cluster: SUF system FeS assembly protein, NifU f... 50 4e-05
UniRef50_O32163 Cluster: NifU-like protein; n=40; Bacilli|Rep: N... 50 4e-05
UniRef50_A0LNT2 Cluster: Nitrogen-fixing NifU domain protein; n=... 50 5e-05
UniRef50_Q88WY9 Cluster: NifU-like protein; n=53; Bacilli|Rep: N... 48 1e-04
UniRef50_Q74JG6 Cluster: NifU-like protein; n=2; Lactobacillus|R... 48 3e-04
UniRef50_Q2LWF0 Cluster: NifU-like protein involved in Fe-S clus... 48 3e-04
UniRef50_UPI00001D2CFF Cluster: UPI00001D2CFF related cluster; n... 47 3e-04
UniRef50_A4EB20 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_Q5UY39 Cluster: NifU-like protein; n=5; Halobacteriacea... 47 5e-04
UniRef50_A6Q975 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_A5EYF1 Cluster: SUF system FeS assembly protein, NifU f... 46 0.001
UniRef50_A1IF14 Cluster: NifU protein; n=1; Candidatus Desulfoco... 46 0.001
UniRef50_Q9X192 Cluster: NifU-like protein; n=3; Thermotogaceae|... 46 0.001
UniRef50_A5UR82 Cluster: Nitrogen-fixing NifU domain protein; n=... 45 0.001
UniRef50_A4M9C6 Cluster: SUF system FeS assembly protein, NifU f... 45 0.001
UniRef50_Q83BY1 Cluster: NifU family protein; n=14; Bacteria|Rep... 45 0.002
UniRef50_Q3A7R9 Cluster: NifU-like protein; n=2; Desulfuromonada... 45 0.002
UniRef50_Q123X7 Cluster: SUF system FeS assembly protein; n=8; B... 43 0.006
UniRef50_Q0AAQ4 Cluster: SUF system FeS assembly protein, NifU f... 43 0.006
UniRef50_O42770 Cluster: Putative uncharacterized protein; n=1; ... 42 0.010
UniRef50_Q9KFV2 Cluster: Nitrogen fixation protein; n=2; Bacillu... 42 0.013
UniRef50_Q6YQA8 Cluster: NifU homolog; n=2; Candidatus Phytoplas... 41 0.022
UniRef50_Q8G5Y3 Cluster: Putative uncharacterized protein; n=4; ... 41 0.030
UniRef50_Q8FF43 Cluster: Putative uncharacterized protein; n=1; ... 41 0.030
UniRef50_O83624 Cluster: Nitrogen fixation protein; n=2; Trepone... 41 0.030
UniRef50_Q8F0D6 Cluster: NifU homolog involved in Fe-S cluster f... 40 0.039
UniRef50_A1ZYV1 Cluster: SUF system FeS assembly protein, NifU f... 40 0.052
UniRef50_Q6MEW2 Cluster: Putative iron-sulfur cluster assembly p... 39 0.090
UniRef50_Q8EV25 Cluster: Nitrogen fixation protein NifU; n=1; My... 39 0.12
UniRef50_Q6YRB5 Cluster: NifU-like protein; n=2; Candidatus Phyt... 39 0.12
UniRef50_Q6KIL2 Cluster: Aminotransferase protein U homolog; n=1... 39 0.12
UniRef50_Q01180 Cluster: Nitrogen fixation protein nifU; n=4; Rh... 39 0.12
UniRef50_Q98R36 Cluster: NITROGEN FIXATION PROTEIN NIFU; n=1; My... 38 0.16
UniRef50_Q1WR14 Cluster: IscU protein; n=1; Lactobacillus saliva... 38 0.16
UniRef50_Q1AZN5 Cluster: SUF system FeS assembly protein; n=1; R... 38 0.21
UniRef50_Q14L11 Cluster: Putative iron-sulfur cluster assembly p... 38 0.21
UniRef50_Q5K806 Cluster: Trehalose transport-related protein, pu... 38 0.28
UniRef50_Q9PQ37 Cluster: Conserved hypothetical; n=1; Ureaplasma... 37 0.48
UniRef50_Q97G09 Cluster: NifU-related domain containing protein;... 37 0.48
UniRef50_Q82UN6 Cluster: NifU-like N terminal domain; n=5; Bacte... 37 0.48
UniRef50_A3LER3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.48
UniRef50_Q821N4 Cluster: NifU protein, putative; n=6; Chlamydoph... 36 0.84
UniRef50_Q0FGM6 Cluster: NifU-related protein involved in Fe-S c... 35 1.5
UniRef50_Q73LQ8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q2JM75 Cluster: WD-repeat/protein kinase domain protein... 33 4.5
UniRef50_A5IXL2 Cluster: Nitrogen fixation protein NifU; n=1; My... 33 4.5
UniRef50_Q4ZVI2 Cluster: Amino acid adenylation; n=4; Pseudomona... 33 5.9
UniRef50_Q04EW3 Cluster: Fe-S cluster formation protein, NifU-li... 33 5.9
UniRef50_A7BC55 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_Q4P2X4 Cluster: Predicted protein; n=1; Ustilago maydis... 33 7.8
>UniRef50_Q9H1K1 Cluster: Iron-sulfur cluster assembly enzyme ISCU,
mitochondrial precursor; n=320; cellular organisms|Rep:
Iron-sulfur cluster assembly enzyme ISCU, mitochondrial
precursor - Homo sapiens (Human)
Length = 167
Score = 180 bits (438), Expect = 3e-44
Identities = 84/99 (84%), Positives = 93/99 (93%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 422
GAPACGDVMKLQI+VDE GKIVDA+FKTFGCGSAIASSSLATEWVKGKTV+EAL +KNTD
Sbjct: 65 GAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNTD 124
Query: 423 IAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQTENKE 539
IAKEL LPPVKLHCSMLAEDAIKAAL+DY++KQ+ + E
Sbjct: 125 IAKELCLPPVKLHCSMLAEDAIKAALADYKLKQEPKKGE 163
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/36 (75%), Positives = 29/36 (80%), Gaps = 3/36 (8%)
Frame = +2
Query: 140 LAAP---YHANVIDHYENPRNVGSLDKKDKNVGTGL 238
L+AP YH V+DHYENPRNVGSLDK KNVGTGL
Sbjct: 28 LSAPARLYHKKVVDHYENPRNVGSLDKTSKNVGTGL 63
>UniRef50_Q6CFQ0 Cluster: Iron sulfur cluster assembly protein 1,
mitochondrial precursor; n=5; Ascomycota|Rep: Iron
sulfur cluster assembly protein 1, mitochondrial
precursor - Yarrowia lipolytica (Candida lipolytica)
Length = 181
Score = 157 bits (382), Expect = 2e-37
Identities = 75/97 (77%), Positives = 86/97 (88%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 422
GAPACGDVMKLQI+VD+NG I D KFKTFGCGSAIASSS TE V+GK++ EA K+KNT
Sbjct: 67 GAPACGDVMKLQIRVDDNGVIQDVKFKTFGCGSAIASSSYVTELVRGKSLAEAGKIKNTV 126
Query: 423 IAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQTEN 533
IAKELSLPPVKLHCSMLAEDAIK+A+SDY K++T+N
Sbjct: 127 IAKELSLPPVKLHCSMLAEDAIKSAISDYNSKRKTKN 163
Score = 53.6 bits (123), Expect = 4e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +2
Query: 125 SPNVILAAPYHANVIDHYENPRNVGSLDKKDKNVGTGL 238
+P I YH V+DHY NPRNVGS++K D++VGTGL
Sbjct: 28 TPLAISRRGYHEKVLDHYNNPRNVGSMNKNDEDVGTGL 65
>UniRef50_A2QHV4 Cluster: Remark: alternate names for S. cerevisiae
Isu2: Nua2; n=8; cellular organisms|Rep: Remark:
alternate names for S. cerevisiae Isu2: Nua2 -
Aspergillus niger
Length = 198
Score = 149 bits (361), Expect = 6e-35
Identities = 72/93 (77%), Positives = 81/93 (87%), Gaps = 1/93 (1%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
GAPACGDVMKLQI+VD ++ KI D KFKTFGCGSAIASSS TE V+G T+DEA K++NT
Sbjct: 75 GAPACGDVMKLQIRVDKDSNKISDVKFKTFGCGSAIASSSYLTELVRGMTLDEAAKIRNT 134
Query: 420 DIAKELSLPPVKLHCSMLAEDAIKAALSDYRIK 518
DIAKEL LPPVKLHCSMLAEDAIK+A+SDY K
Sbjct: 135 DIAKELCLPPVKLHCSMLAEDAIKSAISDYYTK 167
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 152 YHANVIDHYENPRNVGSLDKKDKNVGTGL 238
YH V+DHY NPRNVGS+ K +VGTGL
Sbjct: 46 YHEKVLDHYSNPRNVGSM-AKSMDVGTGL 73
>UniRef50_Q4WNS3 Cluster: Iron-sulfur cofactor synthesis protein
(Isu1), putative; n=2; Eurotiomycetidae|Rep: Iron-sulfur
cofactor synthesis protein (Isu1), putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 255
Score = 148 bits (359), Expect = 1e-34
Identities = 71/93 (76%), Positives = 81/93 (87%), Gaps = 1/93 (1%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDEN-GKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
GAPACGDVMKLQI+VD++ KI D KFKTFGCGSAIASSS TE V+G T+DEA K++NT
Sbjct: 134 GAPACGDVMKLQIRVDKDTSKITDVKFKTFGCGSAIASSSYLTELVRGMTLDEAAKIRNT 193
Query: 420 DIAKELSLPPVKLHCSMLAEDAIKAALSDYRIK 518
DIAKEL LPPVKLHCSMLAEDAIK+A++DY K
Sbjct: 194 DIAKELCLPPVKLHCSMLAEDAIKSAINDYYTK 226
>UniRef50_Q9UTC6 Cluster: Iron sulfur cluster assembly protein 1,
mitochondrial precursor; n=6; Dikarya|Rep: Iron sulfur
cluster assembly protein 1, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 192
Score = 144 bits (349), Expect = 2e-33
Identities = 69/95 (72%), Positives = 79/95 (83%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 422
GAPACGDVM+L I+V+++G I D KFKTFGCGSAIASSS T VKG T++EA K+KNT
Sbjct: 84 GAPACGDVMRLAIRVNKDGVIEDVKFKTFGCGSAIASSSYVTTMVKGMTLEEASKIKNTQ 143
Query: 423 IAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQT 527
IAKEL LPPVKLHCSMLAEDAIK+A+ YR KQ T
Sbjct: 144 IAKELCLPPVKLHCSMLAEDAIKSAVKHYRSKQLT 178
Score = 49.6 bits (113), Expect = 6e-05
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2
Query: 152 YHANVIDHYENPRNVGSLDKKDKNVGTGL 238
YH NV+DHY NPRNVG+L K D +VG GL
Sbjct: 54 YHKNVLDHYNNPRNVGTLPKGDPDVGIGL 82
>UniRef50_Q6E0I7 Cluster: Iron-sulfur cluster assembly protein; n=1;
Toxoplasma gondii|Rep: Iron-sulfur cluster assembly
protein - Toxoplasma gondii
Length = 219
Score = 142 bits (345), Expect = 5e-33
Identities = 69/98 (70%), Positives = 84/98 (85%)
Frame = +3
Query: 234 ASXGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLK 413
A G ACGDV+KLQ+ V E+GKI DA+FKTFGCGSAIASSS ATE +KGKT D+ALKLK
Sbjct: 97 AVVGKAACGDVIKLQVLV-EDGKIRDARFKTFGCGSAIASSSYATELIKGKTCDDALKLK 155
Query: 414 NTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQT 527
NTDIA+ L+LPPVK+HCS+LAEDA++ A+ DY+ KQ+T
Sbjct: 156 NTDIAEYLNLPPVKVHCSLLAEDAVRHAILDYQKKQKT 193
>UniRef50_Q7QTV3 Cluster: GLP_76_35055_35693; n=4; Eukaryota|Rep:
GLP_76_35055_35693 - Giardia lamblia ATCC 50803
Length = 212
Score = 140 bits (338), Expect = 3e-32
Identities = 63/93 (67%), Positives = 82/93 (88%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 422
GAPACGDVM+LQIKV ++GKI +AKFKTFGCG+AIASSS AT ++GK+++EA ++KNTD
Sbjct: 110 GAPACGDVMRLQIKVGDDGKISEAKFKTFGCGAAIASSSYATSLLQGKSLEEASQIKNTD 169
Query: 423 IAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQ 521
I+ +L LPPVKLHCS+LAEDAI+ A+ DY+ K+
Sbjct: 170 ISDKLGLPPVKLHCSVLAEDAIRQAIDDYKRKR 202
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 152 YHANVIDHYENPRNVGSLDKKDKNVGTGL 238
Y + HY P N+G+LD D++VG+GL
Sbjct: 80 YSELAMQHYRTPVNIGTLDDDDEHVGSGL 108
>UniRef50_Q4N9C2 Cluster: NifU protein, putative; n=11; cellular
organisms|Rep: NifU protein, putative - Theileria parva
Length = 301
Score = 128 bits (309), Expect = 1e-28
Identities = 61/92 (66%), Positives = 75/92 (81%)
Frame = +3
Query: 234 ASXGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLK 413
A G ACGDV+KLQ+K+ + I DA FKTFGCGSAIASSS TE VKGKT +EAL +K
Sbjct: 205 AIVGKAACGDVIKLQVKIKDQ-VIEDACFKTFGCGSAIASSSYVTEMVKGKTCEEALAIK 263
Query: 414 NTDIAKELSLPPVKLHCSMLAEDAIKAALSDY 509
NTDI+ +L+LPPVK+HCS+LAEDA+K A++DY
Sbjct: 264 NTDISDKLNLPPVKIHCSLLAEDAVKHAINDY 295
Score = 41.9 bits (94), Expect = 0.013
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 152 YHANVIDHYENPRNVGSLDKKDKNVGTGL 238
Y V DH+ NPRNVGS DK D +VGT +
Sbjct: 178 YSPEVKDHFNNPRNVGSFDKDDPSVGTAI 206
>UniRef50_Q0CL81 Cluster: Iron sulfur cluster assembly protein 1,
mitochondrial; n=1; Aspergillus terreus NIH2624|Rep:
Iron sulfur cluster assembly protein 1, mitochondrial -
Aspergillus terreus (strain NIH 2624)
Length = 179
Score = 122 bits (293), Expect = 1e-26
Identities = 69/119 (57%), Positives = 78/119 (65%), Gaps = 21/119 (17%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDE---------------------NGKIVDAKFKTFGCGSAIASSS 359
GAPACGDVMKLQI+VD+ N +D KFKTFGCGSAIASSS
Sbjct: 33 GAPACGDVMKLQIRVDKDTNTISGTPPPSIIDIMDDPANMLTIDVKFKTFGCGSAIASSS 92
Query: 360 LATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQTENK 536
TE V+G T++EA K+ N IAKEL LPPVKLHCSMLAEDAIK+A+SDY K K
Sbjct: 93 YLTELVRGMTLEEAGKVTNVAIAKELCLPPVKLHCSMLAEDAIKSAISDYYTKNPQARK 151
Score = 43.6 bits (98), Expect = 0.004
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = +2
Query: 164 VIDHYENPRNVGSLDKKDKNVGTGL 238
++DHY NPRNVGS+++KD +VG+GL
Sbjct: 7 LLDHYNNPRNVGSMNRKDLDVGSGL 31
>UniRef50_Q896F6 Cluster: NifU protein; n=7; cellular organisms|Rep:
NifU protein - Clostridium tetani
Length = 158
Score = 119 bits (287), Expect = 5e-26
Identities = 57/91 (62%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 422
G P CGD+MK+ +KV++N I D KFKTFGCGSAIASSS+ATE +KGKT++EA +L N
Sbjct: 46 GNPKCGDIMKIYLKVEDN-IIKDVKFKTFGCGSAIASSSMATELIKGKTLEEAWELSNKA 104
Query: 423 IAKEL-SLPPVKLHCSMLAEDAIKAALSDYR 512
+A L LPPVK+HCS+LAE+AI A++DYR
Sbjct: 105 VADALDGLPPVKMHCSVLAEEAIHKAINDYR 135
>UniRef50_UPI0000E4A7B0 Cluster: PREDICTED: similar to NifU-like
protein; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to NifU-like protein -
Strongylocentrotus purpuratus
Length = 163
Score = 119 bits (286), Expect = 7e-26
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Frame = +3
Query: 243 GAPACGDVMKLQIKV-DENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
GAPACGDVMKLQ+++ D+ I + GC S +++S T +G VDEA +KNT
Sbjct: 62 GAPACGDVMKLQVQISDKKHGIDNVAISDVGCCSLMSTSMEYTNLCRGMHVDEAKDIKNT 121
Query: 420 DIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQTE 530
DIAKELSLPPVKLHCSMLAEDAIKAAL DYR+KQ ++
Sbjct: 122 DIAKELSLPPVKLHCSMLAEDAIKAALQDYRVKQDSK 158
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/61 (52%), Positives = 38/61 (62%)
Frame = +2
Query: 56 LEIYKMAFLINGIRRCMCLKGFGSPNVILAAPYHANVIDHYENPRNVGSLDKKDKNVGTG 235
+ I A L+ R + F P +A YH NVIDHYENPRNVG++DK DKNVGTG
Sbjct: 1 MPISSNARLLGKTLRPLLAAKFSQPGPA-SASYHKNVIDHYENPRNVGAMDKNDKNVGTG 59
Query: 236 L 238
L
Sbjct: 60 L 60
>UniRef50_Q38DM2 Cluster: Iron-sulfur cluster assembly protein,
putative; n=2; Trypanosoma|Rep: Iron-sulfur cluster
assembly protein, putative - Trypanosoma brucei
Length = 180
Score = 118 bits (284), Expect = 1e-25
Identities = 55/93 (59%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIV-DAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
GAP CGD+ ++Q+KV+ ++ D KFK FGCGSAIA+SS A++ ++GKT+ EAL+L N
Sbjct: 52 GAPECGDMTQMQVKVNPETMVIEDVKFKAFGCGSAIAASSYASQAIRGKTLAEALQLTNK 111
Query: 420 DIAKELSLPPVKLHCSMLAEDAIKAALSDYRIK 518
IA+ELSLPPVKLHCSMLAE+ I+AA+ +Y K
Sbjct: 112 RIARELSLPPVKLHCSMLAEETIQAAVENYLSK 144
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = +2
Query: 140 LAAPYHANVIDHYENPRNVGSLDKKDKNVGTGL 238
L + Y V +HY NPRNVG LDK D NVGTGL
Sbjct: 18 LRSLYSPLVEEHYNNPRNVGKLDKSDPNVGTGL 50
>UniRef50_Q8TME1 Cluster: NifU protein; n=24; cellular
organisms|Rep: NifU protein - Methanosarcina acetivorans
Length = 128
Score = 112 bits (269), Expect = 8e-24
Identities = 55/97 (56%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 422
G CGD+MK+ +KV E +IVD KF+TFGCG+AIASSS+ATE +KGK + EA +L N
Sbjct: 30 GNAKCGDIMKIFLKV-EGDRIVDVKFQTFGCGAAIASSSMATELIKGKILKEAWELSNKA 88
Query: 423 IAKEL-SLPPVKLHCSMLAEDAIKAALSDYRIKQQTE 530
+A+ L LPP+K+HCSMLAE+AI A++DY K+ E
Sbjct: 89 VAEALDGLPPIKMHCSMLAEEAIHEAINDYLQKKGLE 125
Score = 32.7 bits (71), Expect = 7.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 152 YHANVIDHYENPRNVGSLDKKD 217
Y A V+DH+ NPRN+GS+ D
Sbjct: 3 YSAKVLDHFSNPRNMGSIANCD 24
>UniRef50_A4LX66 Cluster: Fe-S cluster assembly protein NifU; n=20;
cellular organisms|Rep: Fe-S cluster assembly protein
NifU - Geobacter bemidjiensis Bem
Length = 284
Score = 109 bits (261), Expect = 7e-23
Identities = 53/92 (57%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENG-KIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
G+ ACGD +KL IK+DE +IVDA+F+TFGCGSAIASSS TE VKGKT+DEAL++ N
Sbjct: 31 GSLACGDALKLFIKLDEKKERIVDARFQTFGCGSAIASSSALTEMVKGKTLDEALQISNQ 90
Query: 420 DIAKEL-SLPPVKLHCSMLAEDAIKAALSDYR 512
+IA L LP K+HCS++ ++A++ A++ YR
Sbjct: 91 EIADFLGGLPEEKMHCSVMGQEALEVAIAKYR 122
>UniRef50_P05340 Cluster: Nitrogen fixation protein nifU; n=17;
Bacteria|Rep: Nitrogen fixation protein nifU -
Azotobacter vinelandii
Length = 312
Score = 109 bits (261), Expect = 7e-23
Identities = 53/92 (57%), Positives = 71/92 (77%), Gaps = 2/92 (2%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
G+ +CGD ++L +KVD E I+DA F+TFGCGSAIASSS TE VKG T+DEALK+ N
Sbjct: 31 GSLSCGDALRLTLKVDPETDVILDAGFQTFGCGSAIASSSALTEMVKGLTLDEALKISNQ 90
Query: 420 DIAKEL-SLPPVKLHCSMLAEDAIKAALSDYR 512
DIA L LPP K+HCS++ +A++AA+++YR
Sbjct: 91 DIADYLDGLPPEKMHCSVMGREALQAAVANYR 122
>UniRef50_P20628 Cluster: Nitrogen fixation protein nifU; n=24;
Bacteria|Rep: Nitrogen fixation protein nifU - Anabaena
sp. (strain PCC 7120)
Length = 300
Score = 108 bits (259), Expect = 1e-22
Identities = 52/92 (56%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
G+ ACGD ++L IKV+ E+ KIVD++F+TFGC SAIASSS TE +KG T+DEALK+ N
Sbjct: 37 GSIACGDALRLHIKVEVESDKIVDSRFQTFGCTSAIASSSALTEMIKGLTLDEALKVSNK 96
Query: 420 DIAKEL-SLPPVKLHCSMLAEDAIKAALSDYR 512
DIA L LP K+HCS++ ++A++AA+ +YR
Sbjct: 97 DIADYLGGLPEAKMHCSVMGQEALEAAIYNYR 128
>UniRef50_O34393 Cluster: NifU protein; n=24; cellular
organisms|Rep: NifU protein - Archaeoglobus fulgidus
Length = 153
Score = 102 bits (244), Expect = 9e-21
Identities = 49/90 (54%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 422
G P CGD+M + IKV +N +I D KF+TFGC +AIA+SS+ATE KGKT++EALK+
Sbjct: 29 GNPVCGDLMTIYIKVKDN-RIEDIKFQTFGCAAAIATSSMATEMAKGKTIEEALKITRDA 87
Query: 423 IAKEL-SLPPVKLHCSMLAEDAIKAALSDY 509
+A+ L LP K+HCS LA DA++ A+ DY
Sbjct: 88 VAEALGGLPKQKMHCSNLAADALRRAIVDY 117
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 152 YHANVIDHYENPRNVGSLDKKDKNVGT 232
Y V DH++NPRNVG ++ D VGT
Sbjct: 2 YSDKVFDHFQNPRNVGKIEDAD-GVGT 27
>UniRef50_O67045 Cluster: NifU-like protein; n=4; cellular
organisms|Rep: NifU-like protein - Aquifex aeolicus
Length = 157
Score = 100 bits (240), Expect = 3e-20
Identities = 52/95 (54%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
G PACGD M IKV+ EN I D +FKTFGCGSAIA SS+ TE VKGK + AL L
Sbjct: 32 GNPACGDAMLFTIKVNPENDVIEDVRFKTFGCGSAIAVSSMLTEMVKGKPIQYALNLTYK 91
Query: 420 DIAKEL-SLPPVKLHCSMLAEDAIKAALSDYRIKQ 521
DI +EL LPP K+HC+ L + + A+ DY +KQ
Sbjct: 92 DIFEELGGLPPQKIHCTNLGLETLHVAIKDYLMKQ 126
>UniRef50_A6DAA5 Cluster: NifU family protein; n=2; Caminibacter
mediatlanticus TB-2|Rep: NifU family protein -
Caminibacter mediatlanticus TB-2
Length = 321
Score = 100 bits (239), Expect = 3e-20
Identities = 53/112 (47%), Positives = 72/112 (64%), Gaps = 8/112 (7%)
Frame = +3
Query: 228 VQASXGAPACGDVMKLQIKVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEAL 404
V A G+ ACGD ++L VD + KI+DA+FK+FGCG+AIASS + TE GKTVDEA+
Sbjct: 45 VVADFGSEACGDAVRLYWLVDPKTDKIIDARFKSFGCGTAIASSDVMTELTIGKTVDEAM 104
Query: 405 KLKNTDIAKEL-------SLPPVKLHCSMLAEDAIKAALSDYRIKQQTENKE 539
K+ N D+ K L + PP K+HCS++A D I A + Y+ K E K+
Sbjct: 105 KVTNLDVEKALRDEPNKPAFPPQKMHCSVMAYDVIMEAAAKYKGKDAEELKD 156
>UniRef50_Q2LWE9 Cluster: NifU-like protein involved in Fe-S cluster
formation with 2Fe-2S domain; n=1; Syntrophus
aciditrophicus SB|Rep: NifU-like protein involved in
Fe-S cluster formation with 2Fe-2S domain - Syntrophus
aciditrophicus (strain SB)
Length = 229
Score = 98.7 bits (235), Expect = 1e-19
Identities = 46/91 (50%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 422
G+ ACGD ++L K+DEN +I +AKFK+FGC SAIA++S+ TE V G T+++A K+ N D
Sbjct: 31 GSLACGDALRLTFKLDENKRIKEAKFKSFGCASAIAAASVLTEMVVGLTIEQAEKITNQD 90
Query: 423 IAKEL-SLPPVKLHCSMLAEDAIKAALSDYR 512
IA L LP K+HCS+L E ++ A++ YR
Sbjct: 91 IAAALGGLPEQKMHCSVLGEQVLEKAIACYR 121
>UniRef50_Q8KB04 Cluster: IscU protein; n=10; Chlorobiaceae|Rep:
IscU protein - Chlorobium tepidum
Length = 203
Score = 96.7 bits (230), Expect = 4e-19
Identities = 46/90 (51%), Positives = 67/90 (74%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 CGDVMKLQIKVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAK 431
CGD M + IKVD E+ KI D ++KT+GC SAIAS+S+ +E VKG T+D+A + ++AK
Sbjct: 43 CGDQMMVAIKVDKESEKITDCQWKTYGCASAIASTSILSEMVKGMTLDQAFNISPKEVAK 102
Query: 432 EL-SLPPVKLHCSMLAEDAIKAALSDYRIK 518
EL LP K+HCS+L + A++AA++DY I+
Sbjct: 103 ELGGLPENKIHCSVLGDKALRAAINDYFIR 132
>UniRef50_Q8TSI9 Cluster: NifU family protein; n=5;
Methanomicrobia|Rep: NifU family protein -
Methanosarcina acetivorans
Length = 220
Score = 95.5 bits (227), Expect = 1e-18
Identities = 44/94 (46%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIV-DAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
G+PACGD++ + IKV+ K++ D KF+++GC S IA+ S+ T+ KGKT+DEA K+
Sbjct: 41 GSPACGDMVAVYIKVEPETKVIEDVKFESYGCASNIATGSVITDLAKGKTLDEAKKITWK 100
Query: 420 DIAKEL-SLPPVKLHCSMLAEDAIKAALSDYRIK 518
++EL LPP+K HCS+LA + ++AA+ DY K
Sbjct: 101 QASEELGGLPPIKAHCSVLAVEGLRAAIRDYEEK 134
>UniRef50_Q7M7M7 Cluster: NIFU-LIKE PROTEIN; n=27; cellular
organisms|Rep: NIFU-LIKE PROTEIN - Wolinella
succinogenes
Length = 327
Score = 93.9 bits (223), Expect = 3e-18
Identities = 48/101 (47%), Positives = 67/101 (66%), Gaps = 8/101 (7%)
Frame = +3
Query: 234 ASXGAPACGDVMKLQIKVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 410
A GA +CGD ++L +D + +I+DAKFK+FGCG+AIASS + E GKTVDEA+K+
Sbjct: 47 ADYGAESCGDAVRLYWLIDPKTDRIIDAKFKSFGCGTAIASSDMMVELCLGKTVDEAIKI 106
Query: 411 KNTDIAKEL-------SLPPVKLHCSMLAEDAIKAALSDYR 512
N D+ K L ++P K+HCS++A D IK A S Y+
Sbjct: 107 TNIDVEKALRDDPETPAVPGQKMHCSVMAYDVIKKAASLYK 147
>UniRef50_P05343 Cluster: Nitrogen fixation protein nifU; n=4;
Proteobacteria|Rep: Nitrogen fixation protein nifU -
Klebsiella pneumoniae
Length = 274
Score = 92.3 bits (219), Expect = 9e-18
Identities = 43/92 (46%), Positives = 68/92 (73%), Gaps = 2/92 (2%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIVD-AKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
G+ +CGD ++L ++VD +I++ A F+TFGCGSAIASSS TE + G T+ EA ++ N
Sbjct: 31 GSLSCGDALRLMLRVDPQSEIIEEAGFQTFGCGSAIASSSALTELIIGHTLAEAGQITNQ 90
Query: 420 DIAKEL-SLPPVKLHCSMLAEDAIKAALSDYR 512
IA L LPP K+HCS++ ++A++AA++++R
Sbjct: 91 QIADYLDGLPPEKMHCSVMGQEALRAAIANFR 122
>UniRef50_Q2RIL0 Cluster: Nitrogen-fixing NifU-like; n=3;
Clostridia|Rep: Nitrogen-fixing NifU-like - Moorella
thermoacetica (strain ATCC 39073)
Length = 139
Score = 91.5 bits (217), Expect = 2e-17
Identities = 43/100 (43%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 422
G P CGD + + IKV +N ++VD KF+ GC +AIA+SS+ TE +GKT++E L++ + D
Sbjct: 29 GDPGCGDYLCIYIKVRDN-RLVDVKFQVHGCPAAIATSSILTEMARGKTLEEGLRITDAD 87
Query: 423 IAKEL-SLPPVKLHCSMLAEDAIKAALSDYRIKQQTENKE 539
+A + LP VKLHCS L A+ A+ +Y+ K Q ++
Sbjct: 88 VAAAIGGLPEVKLHCSNLGASALHDAIRNYQAKMQAGGQQ 127
>UniRef50_Q3ZXT4 Cluster: NifU domain protein; n=3;
Dehalococcoides|Rep: NifU domain protein -
Dehalococcoides sp. (strain CBDB1)
Length = 127
Score = 89.4 bits (212), Expect = 6e-17
Identities = 41/95 (43%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 422
G CGDV + I+V +N ++V+ KFKT+GCG+A+A SSL + GKT++EA+K+ N
Sbjct: 31 GNAVCGDVTEFYIRVKDN-RLVEVKFKTYGCGAAVAISSLVSLMATGKTIEEAMKIDNKA 89
Query: 423 IAKEL-SLPPVKLHCSMLAEDAIKAALSDYRIKQQ 524
+ E+ LP + HCS + A+ +A++DY+IK Q
Sbjct: 90 VEAEIKGLPQNRNHCSQMGPQALHSAIADYKIKVQ 124
>UniRef50_A2ZW89 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 156
Score = 88.2 bits (209), Expect = 1e-16
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = +3
Query: 363 ATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQ 521
ATEWVKGK ++E + +KNT+IAK LSLPPVKLHCSMLAEDAIKAA+ DY K+
Sbjct: 90 ATEWVKGKQMEEVVTIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKK 142
>UniRef50_Q4UGE0 Cluster: RNaseP-like protein with Nifu domain,
putative; n=1; Theileria annulata|Rep: RNaseP-like
protein with Nifu domain, putative - Theileria annulata
Length = 261
Score = 84.6 bits (200), Expect = 2e-15
Identities = 43/65 (66%), Positives = 49/65 (75%)
Frame = +3
Query: 234 ASXGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLK 413
A G ACGDV+KLQ+K+ + I DA FKTFGCGSAIASSS TE VKGKT EAL +K
Sbjct: 181 AIVGKAACGDVIKLQVKIKDE-VIEDACFKTFGCGSAIASSSYVTEMVKGKTCKEALAIK 239
Query: 414 NTDIA 428
NTDI+
Sbjct: 240 NTDIS 244
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +2
Query: 122 GSPNVILAAPYHANVIDHYENPRNVGSLDKKDKNVGTGL 238
G + L Y V DH+ NPRNVGS DK D +VGT +
Sbjct: 144 GINRINLVRRYSPEVNDHFNNPRNVGSFDKDDPSVGTAI 182
>UniRef50_Q07HZ2 Cluster: Nitrogen-fixing NifU domain protein; n=6;
Rhizobiales|Rep: Nitrogen-fixing NifU domain protein -
Rhodopseudomonas palustris (strain BisA53)
Length = 339
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/102 (39%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Frame = +3
Query: 237 SXGAPACGDVMKLQIKVDE-NGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLK 413
S GA GD +KL +++D +I A+F+T+GC SAIA+SS TE + GK++DEAL++
Sbjct: 32 SVGALDYGDAVKLMLRIDPATDRIEQARFQTYGCSSAIAASSAITEMIIGKSIDEALEIS 91
Query: 414 NTDIAKEL-SLPPVKLHCSMLAEDAIKAALSDYRIKQQTENK 536
D+A+ L LP +++CS++ +A++ A++ YR ++ K
Sbjct: 92 AADVAEFLGGLPDERMYCSVMTYEAVQKAIAAYRHPEEAAIK 133
>UniRef50_A4J289 Cluster: Nitrogen-fixing NifU domain protein; n=2;
Clostridiales|Rep: Nitrogen-fixing NifU domain protein -
Desulfotomaculum reducens MI-1
Length = 163
Score = 82.2 bits (194), Expect = 1e-14
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 422
G CGDV ++ I V+E +I D KF+ +GC A+A+SS TE KGK +EALKL + D
Sbjct: 42 GEADCGDVCEITILVEEE-QINDIKFRVYGCVGAVATSSAVTELAKGKHCEEALKLTDDD 100
Query: 423 IAKEL-SLPPVKLHCSMLAEDAIKAALSDYRI-KQQTEN 533
+ + L LP K HCS+L A+K A+ DY + KQ EN
Sbjct: 101 VVEFLDGLPDQKKHCSLLGIRALKQAIYDYWLYKQLLEN 139
>UniRef50_Q74DA8 Cluster: NifU-like domain protein; n=2;
Desulfuromonadales|Rep: NifU-like domain protein -
Geobacter sulfurreducens
Length = 131
Score = 80.6 bits (190), Expect = 3e-14
Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = +3
Query: 228 VQASXGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALK 407
V G P CGD + ++++E+ + D KF GCG+AIA+SS+ATE V GK +DE +
Sbjct: 27 VVVQAGDPTCGDAVLYFLRIEED-IVRDIKFLIKGCGAAIATSSVATELVMGKGLDEVMG 85
Query: 408 LKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSDYRIKQQTENK 536
L + IA+ L LP K+HCS +A A+ AA+ YR E K
Sbjct: 86 LSDQIIAQALDGLPEEKMHCSNMAASALHAAVEQYRATVAGETK 129
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 140 LAAPYHANVIDHYENPRNVGSLDKKDKNVGTGLXWC 247
+A Y A V DH NPRNVGSL+ + V G C
Sbjct: 1 MAEIYSAKVWDHVRNPRNVGSLEDANVVVQAGDPTC 36
>UniRef50_Q3A8K8 Cluster: NifU-like protein; n=3;
Desulfuromonadales|Rep: NifU-like protein - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 143
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/95 (41%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Frame = +3
Query: 228 VQASXGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALK 407
V G P CGD + + + ++E+ I D K+K GC +AIA++S+ +E G+T+++A++
Sbjct: 24 VAIQYGDPTCGDCLLVFLLIEED-VIRDMKYKVLGCAAAIATASITSEMAIGRTLEQAME 82
Query: 408 LKNTDIAKEL-SLPPVKLHCSMLAEDAIKAALSDY 509
L ++A L LPP K+HCS LA A+KAAL Y
Sbjct: 83 LTEKEVAVALGGLPPQKMHCSNLAVGALKAALRVY 117
>UniRef50_A5D4Q3 Cluster: NifU homolog; n=1; Pelotomaculum
thermopropionicum SI|Rep: NifU homolog - Pelotomaculum
thermopropionicum SI
Length = 150
Score = 75.4 bits (177), Expect = 1e-12
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 CGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 434
CGD M + +KV +N KI +A F T GCG+ IA S+ TE K +V+EALK+K DI
Sbjct: 47 CGDTMAIWLKVIDN-KINNATFWTDGCGTTIACGSMVTEMAKNLSVEEALKIKAEDILNA 105
Query: 435 L-SLPPVKLHCSMLAEDAIKAALSDY 509
L LP HC+ LA +A++ A+ DY
Sbjct: 106 LGGLPEDHAHCAALAAEALRNAVKDY 131
>UniRef50_A1AQD6 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Pelobacter propionicus DSM 2379|Rep: Nitrogen-fixing
NifU domain protein - Pelobacter propionicus (strain DSM
2379)
Length = 133
Score = 73.3 bits (172), Expect = 5e-12
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 422
G P CGD +K+ +K++++ + D KF+ GC +AIA +S TE V GK V EA+ + +
Sbjct: 33 GDPECGDHLKVYVKIEDD-IVKDIKFQIKGCPAAIACASAMTELVMGKPVGEAMLVSDDQ 91
Query: 423 IAKEL-SLPPVKLHCSMLAEDAIKAALSDYRIKQQ 524
I + + LP K+HCS L + A+ DY IK +
Sbjct: 92 IIEYIDGLPEFKVHCSALGASGFRVAVMDYSIKSK 126
>UniRef50_A0LFU2 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Nitrogen-fixing
NifU domain protein - Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB)
Length = 144
Score = 72.9 bits (171), Expect = 6e-12
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 CGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 434
CGD M + +KV ++G I D K++ GC A+AS+ A E +KGKT++EA L + DI +
Sbjct: 55 CGDTMSVCLKV-QDGVIRDLKYQVLGCPGAVASAMAAVELIKGKTIEEARSLNDGDIFRL 113
Query: 435 L-SLPPVKLHCSMLAEDAIKAALSDYRIK 518
L +P K HC LA +K AL +Y K
Sbjct: 114 LEEIPAQKHHCIQLAVKTLKKALDEYARK 142
>UniRef50_Q023P2 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Solibacter usitatus Ellin6076|Rep: Nitrogen-fixing NifU
domain protein - Solibacter usitatus (strain Ellin6076)
Length = 118
Score = 66.1 bits (154), Expect = 7e-10
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 428
PACGD+++L E G+I +A +K GC ++IA+ S TEW+ GKT DE + T I
Sbjct: 31 PACGDILRLSALFTE-GRIAEASYKVRGCTASIAAGSALTEWLAGKTRDELSRFTATLID 89
Query: 429 KEL-SLPPVKLHCSMLAEDAIKA 494
+ + LP H ++L D +KA
Sbjct: 90 EAVGGLPTASKHAAVLCADGVKA 112
>UniRef50_A7DRZ9 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Candidatus Nitrosopumilus maritimus
SCM1|Rep: SUF system FeS assembly protein, NifU family -
Candidatus Nitrosopumilus maritimus SCM1
Length = 147
Score = 66.1 bits (154), Expect = 7e-10
Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 428
P CGD + + +K+D++ K+ D KF GC +A SS+ TE KGK++++ ++ D+
Sbjct: 37 PLCGDSIDIDMKIDDD-KVTDIKFHGKGCAICMACSSVLTEITKGKSLEDVKNIEKNDVL 95
Query: 429 KELS---LPPVKLHCSMLAEDAIKAALSDYRIKQQTENKE 539
EL L V++ C++L+ +K+AL Y K +++
Sbjct: 96 SELGLEHLQAVRIKCALLSLKVLKSALYTYLAKHLESSED 135
>UniRef50_Q98AM0 Cluster: Nitrogen fixation protein; NifU; n=2;
Mesorhizobium loti|Rep: Nitrogen fixation protein; NifU
- Rhizobium loti (Mesorhizobium loti)
Length = 153
Score = 65.3 bits (152), Expect = 1e-09
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGK-IVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
GA ACGD +KL + D + I A F+TFG GSAI +SS T+++ GKT+DEAL++ +
Sbjct: 36 GAVACGDGLKLMMGFDPKTETITAATFQTFGRGSAITASSTITQFIVGKTIDEALQITDQ 95
Query: 420 DIAKEL-SLPPVKLHCSM 470
++A L +LPP ++ S+
Sbjct: 96 EMADFLGALPPHTIYSSL 113
>UniRef50_Q8F7C7 Cluster: NifU-like protein; n=4; Leptospira|Rep:
NifU-like protein - Leptospira interrogans
Length = 263
Score = 62.9 bits (146), Expect = 6e-09
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = +3
Query: 255 CGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 434
CGD ++ +K+D + + DA + T GCG I + ++ATE+ KGKT+++ + +TDI
Sbjct: 36 CGDGYRIYLKIDSSETVTDASYTTTGCGFGIVALAMATEFAKGKTIEQLKSITSTDIEGM 95
Query: 435 LSLPPVKLHCSMLAEDAIKAALSDY 509
P + + A A+ A+ DY
Sbjct: 96 FEFPERRKNYPESAVAALLQAVRDY 120
>UniRef50_Q1AWB1 Cluster: TRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase;
n=2; Bacteria|Rep: TRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
- Rubrobacter xylanophilus (strain DSM 9941 / NBRC
16129)
Length = 488
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +3
Query: 243 GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 422
G ACGD ++ ++V + ++ + +++ +GC + IA+ S E +G+++ A ++ D
Sbjct: 32 GNAACGDQVRFTLRVGGDLRLQEVRYRAYGCAACIAAGSALAELAEGRSITGAAQISRGD 91
Query: 423 IAKELS--LPPVKLHCSMLAEDAIKAALSDYRIKQ 521
I + L LPP K H + LA DA+ A DY +Q
Sbjct: 92 IQEALGGPLPPGKEHGATLALDALHRAFEDYWSRQ 126
>UniRef50_Q8TGK9 Cluster: Uncharacterized protein YPL135C-A; n=2;
Saccharomycetaceae|Rep: Uncharacterized protein
YPL135C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 57
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/47 (63%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = -2
Query: 346 IAEPHPKVLNLASTIFPFSS-TLICNFITSPHAGAPXEACTYIFIFL 209
+AEPHPKVLNL S+I P S TLICN ITSPHAGAP + FL
Sbjct: 1 MAEPHPKVLNLTSSITPVESLTLICNLITSPHAGAPTRPVPTLGNFL 47
>UniRef50_A0RXA5 Cluster: Fe-S cluster formation protein; n=1;
Cenarchaeum symbiosum|Rep: Fe-S cluster formation
protein - Cenarchaeum symbiosum
Length = 135
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 428
P CGD + + +K D I D F GC +A +S+ TE VKGK+V EA L+ D+
Sbjct: 27 PLCGDSIDMDLKFDGE-TISDVSFHGSGCAICMACTSVLTELVKGKSVSEARGLEKNDVL 85
Query: 429 KELS---LPPVKLHCSMLAEDAIKAAL 500
EL L V++ C++L+ +K AL
Sbjct: 86 GELGLEHLQAVRIKCALLSLKVLKLAL 112
>UniRef50_A6Q4J9 Cluster: Putative uncharacterized protein; n=1;
Nitratiruptor sp. SB155-2|Rep: Putative uncharacterized
protein - Nitratiruptor sp. (strain SB155-2)
Length = 159
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +3
Query: 258 GDVMKLQIKVDENGKIV-DAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 434
G+++ + +K+D I+ + K++T GCG+ + S +L +E KGKT+ ++ K
Sbjct: 40 GEMVVIYLKIDPISTIIKEIKWQTNGCGTTLVSGALFSEEYKGKTLQSGVEFTQDVFEKI 99
Query: 435 LSLPPVKLHCSMLAEDAIKAALSDYRIKQQTENKE 539
PP C + A AA+ DY +++ ENKE
Sbjct: 100 KDNPPEDAACGEVVARAFMAAVQDYEARKRGENKE 134
>UniRef50_A5UR74 Cluster: SUF system FeS assembly protein, NifU
family; n=5; Chloroflexi (class)|Rep: SUF system FeS
assembly protein, NifU family - Roseiflexus sp. RS-1
Length = 132
Score = 56.8 bits (131), Expect = 4e-07
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Frame = +3
Query: 228 VQASXGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALK 407
V A P CGD +++ +++ ENG I DA+F GC + AS+S+ TE + G V++A +
Sbjct: 27 VSAEEHNPLCGDRVRIDLRI-ENGIITDARFDGRGCAISQASASMLTEEIVGMPVEQAKQ 85
Query: 408 LKNTDIAKELSLP----PVKLHCSMLAEDAIKAAL 500
+ + +P PV++ C++L +K L
Sbjct: 86 FSKDQMLALIGIPLNHNPVRIKCALLPLKTLKVGL 120
>UniRef50_Q97E24 Cluster: NifU homolog involved in Fe-S cluster
formation; n=8; Clostridia|Rep: NifU homolog involved in
Fe-S cluster formation - Clostridium acetobutylicum
Length = 143
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDI 425
P+CGD + LQ+K+ EN I DA F GC + AS+S+ + +KGKTV+EA KL T I
Sbjct: 36 PSCGDDITLQLKI-ENNVIEDAAFIGVGCAISQASTSIMIDLIKGKTVEEAKKLVETFI 93
>UniRef50_A0LFS6 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Nitrogen-fixing
NifU domain protein - Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB)
Length = 141
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 CGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 434
CGD +++ + V +GKI A F+T GC ++A ++ A G T +EA ++ I +
Sbjct: 42 CGDTVEMFLMV-RDGKIRTASFETNGCIYSVACANTAVHMASGLTPEEARRITPDQIVEF 100
Query: 435 L-SLPPVKLHCSMLAEDAIKAALSDYR 512
L +LPP + HC+ A A++ AL+D R
Sbjct: 101 LETLPPEEEHCAEQAVKALRLALADAR 127
>UniRef50_Q1IN98 Cluster: Nitrogen-fixing NifU-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Nitrogen-fixing
NifU-like - Acidobacteria bacterium (strain Ellin345)
Length = 120
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 428
PACGD+++L ++ E G + + +F+ GC A+A S ++G++V + LK++ D+
Sbjct: 31 PACGDILELAAEIHE-GVVREIRFRAKGCVPAMACGSAIATLIQGQSVAQLLKIRREDVL 89
Query: 429 KEL-SLPPVKLHCSMLAEDA 485
+E+ S+P H LA DA
Sbjct: 90 REVESVPQASGHAVHLALDA 109
>UniRef50_A1SV02 Cluster: SUF system FeS assembly protein, NifU
family protein; n=1; Psychromonas ingrahamii 37|Rep: SUF
system FeS assembly protein, NifU family protein -
Psychromonas ingrahamii (strain 37)
Length = 153
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 410
P CGD + L +++D+N +I+DA F+ GC ++A+SSL TE +K TV EA +L
Sbjct: 38 PLCGDRLTLYLRIDDN-RIIDASFEGEGCAISMAASSLMTERIKNMTVTEARQL 90
>UniRef50_Q3E456 Cluster: Nitrogen-fixing NifU-like, N-terminal;
n=2; Chloroflexus|Rep: Nitrogen-fixing NifU-like,
N-terminal - Chloroflexus aurantiacus J-10-fl
Length = 130
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +3
Query: 237 SXGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 416
S G P CGD + + ++V NG++ D +F GC ++ ++S+ E ++G TV + L L
Sbjct: 34 SGGVPDCGDTLTVYLRVAPNGRLTDLQFTGQGCSVSVGTASILIEQLQGATVADLLALDE 93
Query: 417 TDIAKEL--SLPPVKLHCSMLAEDAIKAA 497
T + + + + HC+ L +KAA
Sbjct: 94 TAAVQIVGSEVFQARPHCATLIFRTLKAA 122
>UniRef50_Q7MYK4 Cluster: Similarities with nitrogen fixation
proteins; n=1; Photorhabdus luminescens subsp.
laumondii|Rep: Similarities with nitrogen fixation
proteins - Photorhabdus luminescens subsp. laumondii
Length = 118
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 228 VQASXGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALK 407
++ + G P CGD + + + +D G++ +A F+ +GC +++A S+ KGKT++E
Sbjct: 24 IKLALGNPVCGDKVDIDLTLDNQGRVNNACFRAWGCTASLAMSNQFCRHAKGKTLEELNA 83
Query: 408 LKNTDIAKEL-SLPPVKLHC 464
L I L L P + HC
Sbjct: 84 LSPEGIDALLGELEPAQQHC 103
>UniRef50_A7D1I7 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Halorubrum lacusprofundi ATCC 49239|Rep:
SUF system FeS assembly protein, NifU family -
Halorubrum lacusprofundi ATCC 49239
Length = 172
Score = 52.8 bits (121), Expect = 7e-06
Identities = 29/104 (27%), Positives = 60/104 (57%), Gaps = 7/104 (6%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDA-KFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDI 425
P+CGD +++Q+ +D+ G+ + A +F GC ++AS+S+ +E + G +++E L DI
Sbjct: 69 PSCGDTIQMQVALDDAGETIKAVRFTGDGCAISMASASMLSERLHGMSIEELDALDTDDI 128
Query: 426 AKEL--SLPPVKLHCSML----AEDAIKAALSDYRIKQQTENKE 539
+ L + P+++ C++L A+D K + +T+ +E
Sbjct: 129 TEMLGVDISPMRVKCAVLGRQVAQDGSKIHRDELDPDDRTKTEE 172
Score = 33.1 bits (72), Expect = 5.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 152 YHANVIDHYENPRNVGSLDKKD 217
Y ++DHY+NPRN G L+ D
Sbjct: 40 YRQQILDHYKNPRNYGELEDPD 61
>UniRef50_Q7UU01 Cluster: Nitrogen fixation protein NifU; n=1;
Pirellula sp.|Rep: Nitrogen fixation protein NifU -
Rhodopirellula baltica
Length = 144
Score = 52.4 bits (120), Expect = 9e-06
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 428
P CGD + + +K+D++GK+ +A F+ GC + AS+S+ E ++GKT++E +K +
Sbjct: 37 PLCGDRIVITLKLDDSGKVAEAWFEGEGCVISQASASMLIERMEGKTIEE-VKAFTAEEM 95
Query: 429 KEL---SLPPVKLHCSMLAEDAIKAAL 500
EL L P + C +L+ +++AL
Sbjct: 96 LELFGPKLTPNRQKCCLLSWKILQSAL 122
>UniRef50_Q6APN8 Cluster: Related to nitrogen fixation protein; n=1;
Desulfotalea psychrophila|Rep: Related to nitrogen
fixation protein - Desulfotalea psychrophila
Length = 136
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +3
Query: 255 CGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 434
CGD M++ +++ ++ ++ ++ + GC + A +GKT++E K+ +
Sbjct: 44 CGDTMEMSLRIRDD-RVEKTRYSSDGCSISQQCIEAAAMLAQGKTIEEVRKINMMHVIDI 102
Query: 435 LS-LPPVKLHCSMLAEDAIKAALSDYRIKQQ 524
+ LP LHC+ LAE ++ A+ DY KQ+
Sbjct: 103 VGDLPDSHLHCAQLAETTLQHAIGDYVQKQR 133
>UniRef50_Q1V2E5 Cluster: Putative nifU-like protein; n=2;
Candidatus Pelagibacter ubique|Rep: Putative nifU-like
protein - Candidatus Pelagibacter ubique HTCC1002
Length = 156
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 428
P CGD + + +K+DEN K+ D F+ GC ++AS+S+ T+ +KGK E ++ N +
Sbjct: 36 PLCGDNVHIFLKLDENKKVEDISFEGSGCAISMASASIMTDLIKGKEEVEVKEIVNDFLG 95
Query: 429 KELSLPPVK 455
P +K
Sbjct: 96 MIKENPELK 104
>UniRef50_Q1JIL3 Cluster: IscU protein; n=11; Streptococcus
pyogenes|Rep: IscU protein - Streptococcus pyogenes
serotype M2 (strain MGAS10270)
Length = 159
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/63 (47%), Positives = 39/63 (61%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 428
P CGDV+ L +K DE+ KI D F GC + ASSS+ T+ V GK+ +EAL L DI
Sbjct: 38 PTCGDVISLTVKFDED-KIEDIAFAGNGCTISTASSSMMTDAVIGKSKEEALAL--ADIF 94
Query: 429 KEL 437
E+
Sbjct: 95 SEM 97
>UniRef50_Q62LM3 Cluster: NifU-like domain protein; n=14;
Burkholderiales|Rep: NifU-like domain protein -
Burkholderia mallei (Pseudomonas mallei)
Length = 163
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLK 413
P CGD +K+Q+++ E G+I D +F GC IAS+S+ TE V G+ VD A L+
Sbjct: 47 PQCGDDLKVQLRI-EGGRIGDIRFDGHGCAICIASASMMTEAVIGRDVDAARALQ 100
>UniRef50_Q2JCF1 Cluster: SUF system FeS assembly protein; n=37;
Actinomycetales|Rep: SUF system FeS assembly protein -
Frankia sp. (strain CcI3)
Length = 172
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/87 (33%), Positives = 50/87 (57%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 428
P CGD + L++KV + G + D +++ GC + AS+S+ ++ V GK+VD ALKL+ +A
Sbjct: 36 PTCGDEVTLRVKVSD-GVVEDVSYESEGCSISQASASVMSDLVIGKSVDAALKLEREFLA 94
Query: 429 KELSLPPVKLHCSMLAEDAIKAALSDY 509
S ++ +L + A +S Y
Sbjct: 95 LMQSRGTIEGDEDVLEDAVAFAGVSKY 121
>UniRef50_Q83CI7 Cluster: NifU family protein; n=2; Coxiella
burnetii|Rep: NifU family protein - Coxiella burnetii
Length = 119
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +3
Query: 258 GDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL 437
G + +L ++ +N I +AKF+ +G A A+ W +GKT DEA L + I K L
Sbjct: 38 GHLFRLYLRC-QNDIITEAKFQAYGSVVATAACEYVCRWAEGKTFDEANHLDSDQIQKAL 96
Query: 438 SLPPVKLHCSMLAEDAIKAAL 500
+L +++H ++L E K L
Sbjct: 97 NLSSLQVHAALLIERLWKKTL 117
>UniRef50_A4BSU8 Cluster: Putative uncharacterized protein; n=1;
Nitrococcus mobilis Nb-231|Rep: Putative uncharacterized
protein - Nitrococcus mobilis Nb-231
Length = 123
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = +3
Query: 300 KIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAE 479
+IVDA+++ FGC +AIA+++ + V G L IA+ L+LP K +++ E
Sbjct: 45 RIVDARYEVFGCPAAIAAAAWTAQRVVGAAPAAVASLHGRTIAELLALPVEKTGVALVVE 104
Query: 480 DAIKAALS 503
DA++AAL+
Sbjct: 105 DAVRAALA 112
>UniRef50_Q2JUE7 Cluster: SUF system FeS assembly protein, NifU
family; n=5; Synechococcus|Rep: SUF system FeS assembly
protein, NifU family - Synechococcus sp. (strain
JA-3-3Ab) (Cyanobacteria bacteriumYellowstone A-Prime)
Length = 162
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENG-KIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 410
P+CGD + L +++D +I D KF+ GC A+AS+ L + V+G+T+ EAL+L
Sbjct: 39 PSCGDTIDLTLQLDPGQERIADIKFEGEGCAIALASADLMADAVRGRTIPEALQL 93
>UniRef50_O32163 Cluster: NifU-like protein; n=40; Bacilli|Rep:
NifU-like protein - Bacillus subtilis
Length = 147
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIV-DAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 410
P CGD ++L +K+D G IV DAKF+ GC ++AS+S+ T+ +KGK ++ AL +
Sbjct: 39 PTCGDRIRLTMKLD--GDIVEDAKFEGEGCSISMASASMMTQAIKGKDIETALSM 91
>UniRef50_A0LNT2 Cluster: Nitrogen-fixing NifU domain protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Nitrogen-fixing
NifU domain protein - Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB)
Length = 154
Score = 50.0 bits (114), Expect = 5e-05
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 CGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 434
CG+ M++ +++ E+ +IVD F T GCG + A LA G+ +D+A ++ I
Sbjct: 53 CGETMEIHLEIQED-EIVDGSFVTDGCGPSKACGFLAVMLAIGRNLDDAAMIEGDTILDM 111
Query: 435 L-SLPPVKLHCSMLAEDAIKAALSDY 509
+ LP HC+ LA ++ A+ ++
Sbjct: 112 IEDLPEDHHHCAYLAAATLQTAIHNH 137
>UniRef50_Q88WY9 Cluster: NifU-like protein; n=53; Bacilli|Rep:
NifU-like protein - Lactobacillus plantarum
Length = 155
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
P CGDV+ L I++D + +I D F GC + AS+S+ T+ V GK+ ++AL + T
Sbjct: 39 PTCGDVINLAIQLDAHDQIEDIGFTGEGCTISQASASMMTDAVMGKSKEQALAMAKT 95
>UniRef50_Q74JG6 Cluster: NifU-like protein; n=2; Lactobacillus|Rep:
NifU-like protein - Lactobacillus johnsonii
Length = 152
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 416
P+CGD + L I + EN KI F GC + AS+S+ T+ VKGK++ EA++L +
Sbjct: 39 PSCGDKIHLTILI-ENNKIKKIAFNGEGCTISKASASMMTDLVKGKSIKEAIELSH 93
>UniRef50_Q2LWF0 Cluster: NifU-like protein involved in Fe-S cluster
formation; n=3; Syntrophus aciditrophicus SB|Rep:
NifU-like protein involved in Fe-S cluster formation -
Syntrophus aciditrophicus (strain SB)
Length = 238
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +3
Query: 252 ACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAK 431
+CGD M++ +K + ++ D T GC + +GKTV E + I +
Sbjct: 47 SCGDTMEIALKFN-GPRVEDVHCWTDGCAISKMCVETVGMLARGKTVPELRTIDTASILE 105
Query: 432 ELS-LPPVKLHCSMLAEDAIKAALSDYRIK 518
+ LP +HC++LAE ++ A+S Y +K
Sbjct: 106 RVGQLPETHMHCAVLAETTLQKAVSFYTLK 135
>UniRef50_UPI00001D2CFF Cluster: UPI00001D2CFF related cluster; n=1;
unknown|Rep: UPI00001D2CFF UniRef100 entry - unknown
Length = 51
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +3
Query: 435 LSLPPVKLHCSMLAEDAIKAALSDYRIKQ 521
LSLPPVK+HCS+ AEDA++AA++DY+ +Q
Sbjct: 15 LSLPPVKIHCSVPAEDAMRAAVADYQAEQ 43
>UniRef50_A4EB20 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 144
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 428
P+CGD + LQ++V EN I +A F GC + AS+ + + + G+TV+EA +L +A
Sbjct: 35 PSCGDELTLQLRV-ENDVIEEASFTGHGCAISQASADIMADLITGETVEEARRLAGLFLA 93
>UniRef50_Q5UY39 Cluster: NifU-like protein; n=5;
Halobacteriaceae|Rep: NifU-like protein - Haloarcula
marismortui (Halobacterium marismortui)
Length = 142
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVD-AKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDI 425
P CGD +++ + +DE+ + ++ F+ GC + AS+S+ ++ + G V++ + DI
Sbjct: 38 PMCGDEIRMDVVLDEDEETIEQVAFQGDGCAISQASASMLSQELAGMAVEDLKAMDRDDI 97
Query: 426 AKEL--SLPPVKLHCSMLAE 479
+ L + P+++ C++LAE
Sbjct: 98 TEMLGVDISPMRVKCAVLAE 117
>UniRef50_A6Q975 Cluster: Putative uncharacterized protein; n=1;
Sulfurovum sp. NBC37-1|Rep: Putative uncharacterized
protein - Sulfurovum sp. (strain NBC37-1)
Length = 152
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 273 LQIKVDENGKIV-DAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPP 449
++++ DE + D KF+ GC + + + S+ TE KG ++ A L + + LP
Sbjct: 42 MRVETDEEEPYIGDIKFQAIGCTTTVVAGSMLTEEAKGLNLNGAYNLVDATMKLLEKLPA 101
Query: 450 VKLHCSMLAEDAIKAALSDYRIKQQTE 530
CS + AIKAA+ Y +K+Q +
Sbjct: 102 EDAACSEMVALAIKAAVDTY-VKRQED 127
>UniRef50_A5EYF1 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Dichelobacter nodosus VCS1703A|Rep: SUF
system FeS assembly protein, NifU family - Dichelobacter
nodosus (strain VCS1703A)
Length = 146
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 410
P CGD +K+ ++++E G I D F GC + AS+S+ TE GKT++E KL
Sbjct: 37 PLCGDNLKVFVRLNE-GVIADLSFVGDGCAISKASASMMTELAMGKTLEEFQKL 89
>UniRef50_A1IF14 Cluster: NifU protein; n=1; Candidatus
Desulfococcus oleovorans Hxd3|Rep: NifU protein -
Candidatus Desulfococcus oleovorans Hxd3
Length = 105
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +3
Query: 255 CGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKE 434
CGD +++ IK + I F GC + AS++ +GK ++ A ++ +
Sbjct: 14 CGDTVEMFIKKGTDSIIEQVLFDIRGCRNTHASANAVAVLAEGKKIEAAWEITPEAVIDL 73
Query: 435 L-SLPPVKLHCSMLAEDAIKAALSDYRIKQQT 527
L +LPP HC+ LA A AL+D R + ++
Sbjct: 74 LETLPPDHFHCAELAVGAFYLALADCRNQHES 105
>UniRef50_Q9X192 Cluster: NifU-like protein; n=3;
Thermotogaceae|Rep: NifU-like protein - Thermotoga
maritima
Length = 142
Score = 45.6 bits (103), Expect = 0.001
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 18/101 (17%)
Frame = +3
Query: 252 ACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEAL--------- 404
+CGD + L +KV E+G + DAKF+ GC + AS+SL E + G+ V+E
Sbjct: 37 SCGDEITLYLKV-EDGVVKDAKFEGMGCVISQASASLMLERIIGERVEEIFSLIEEAEKM 95
Query: 405 ---------KLKNTDIAKELSLPPVKLHCSMLAEDAIKAAL 500
KLKN + ++ P ++ C +LA +K AL
Sbjct: 96 SRGENFDEGKLKNVTLMSDIKNYPARVKCFILAWKTLKEAL 136
>UniRef50_A5UR82 Cluster: Nitrogen-fixing NifU domain protein; n=4;
Bacteria|Rep: Nitrogen-fixing NifU domain protein -
Roseiflexus sp. RS-1
Length = 129
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +3
Query: 228 VQASXGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALK 407
V + G P CGDV+ + +KV+ +I F+ GC + A++S+ TE G T
Sbjct: 28 VTLTGGHPECGDVITIYLKVEPPDRITAVSFEGRGCTISQAAASILTELAAGATFAAVET 87
Query: 408 LKNTDIAK--ELSLPPVKLHCSMLAEDAIKAALSDYRI 515
+ ++ E + + C+ LA +KAA+S R+
Sbjct: 88 MTPDEMIDLLEREVVGTRPRCATLALRILKAAISTCRM 125
>UniRef50_A4M9C6 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Petrotoga mobilis SJ95|Rep: SUF system FeS
assembly protein, NifU family - Petrotoga mobilis SJ95
Length = 145
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +3
Query: 252 ACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 410
+CGD + L +KV++N I + F GC + AS+S+ E+++GKTVDEA K+
Sbjct: 41 SCGDEITLYLKVEDN-IIKEITFTGHGCIISQASASMMCEYLEGKTVDEANKI 92
>UniRef50_Q83BY1 Cluster: NifU family protein; n=14; Bacteria|Rep:
NifU family protein - Coxiella burnetii
Length = 158
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/51 (41%), Positives = 34/51 (66%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEA 401
P CGD + + + ++NG I DA+F+ GC ++AS+SL E +KGK++ A
Sbjct: 47 PLCGDRLTVFFQ-EKNGVITDARFEGSGCAISMASASLMMEALKGKSIQAA 96
>UniRef50_Q3A7R9 Cluster: NifU-like protein; n=2;
Desulfuromonadales|Rep: NifU-like protein - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 335
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +3
Query: 303 IVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKEL-SLPPVKLHCSMLAE 479
I D ++ FGCG ++A+ + A E K + A+ + + + L LPP + +C+ LA
Sbjct: 54 ITDVGYQVFGCGYSMAACAAAAELACNKNLPSAMAIDASQVDALLDGLPPERSYCADLAV 113
Query: 480 DAIKAALSDYRIKQQT 527
+A++AAL+ QT
Sbjct: 114 EALQAALASASGDAQT 129
>UniRef50_Q123X7 Cluster: SUF system FeS assembly protein; n=8;
Bacteria|Rep: SUF system FeS assembly protein -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 149
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 410
P CGD + L ++V + G I +A+F+ GC + AS+SL T+ +KGKT E L
Sbjct: 37 PLCGDRLTLYLQVVD-GVIENARFEGSGCAISTASASLMTDALKGKTETEVENL 89
>UniRef50_Q0AAQ4 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Alkalilimnicola ehrlichei MLHE-1|Rep: SUF
system FeS assembly protein, NifU family -
Alkalilimnicola ehrlichei (strain MLHE-1)
Length = 171
Score = 43.2 bits (97), Expect = 0.006
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 410
P CGD +++ +++DE G++ A F C ASSS+ TE V G E L
Sbjct: 60 PVCGDHIQVYLRLDEAGRVAAASFTGEACAICTASSSMMTEVVAGLDASEVAAL 113
>UniRef50_O42770 Cluster: Putative uncharacterized protein; n=1;
Paxillus involutus|Rep: Putative uncharacterized protein
- Paxillus involutus (Naked brimcap)
Length = 47
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 450 VKLHCSMLAEDAIKAALSDYRIK 518
VKLHCSMLAEDAI++A+ DYR K
Sbjct: 1 VKLHCSMLAEDAIRSAIRDYRSK 23
>UniRef50_Q9KFV2 Cluster: Nitrogen fixation protein; n=2;
Bacillus|Rep: Nitrogen fixation protein - Bacillus
halodurans
Length = 149
Score = 41.9 bits (94), Expect = 0.013
Identities = 19/56 (33%), Positives = 36/56 (64%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 416
P CGDV+ L +++ + + D F GC ++AS+S+ TE +KG +++EA +++
Sbjct: 36 PTCGDVITLYVEL-QGHHVDDIAFVGEGCSISMASASMMTELLKGVSLEEASSMRH 90
>UniRef50_Q6YQA8 Cluster: NifU homolog; n=2; Candidatus Phytoplasma
asteris|Rep: NifU homolog - Onion yellows phytoplasma
Length = 147
Score = 41.1 bits (92), Expect = 0.022
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +3
Query: 252 ACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIA 428
+CGD + LQIK+ N K++D K++T C AS+SL + +K + + L+ N +A
Sbjct: 39 SCGDSISLQIKI-SNQKLIDIKYETQACAICRASASLMSIHLKNLEIQQTLEKINHFLA 96
>UniRef50_Q8G5Y3 Cluster: Putative uncharacterized protein; n=4;
Bifidobacterium|Rep: Putative uncharacterized protein -
Bifidobacterium longum
Length = 179
Score = 40.7 bits (91), Expect = 0.030
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 PACGDVMKLQIKV--DENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
P CGD + ++V DE I + GC + AS S+ + V GKTVDEA+ L+ T
Sbjct: 62 PTCGDEATIHVEVSDDEPHTIKRLVWDGHGCSISQASLSVMVDLVDGKTVDEAMDLEQT 120
>UniRef50_Q8FF43 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli O6|Rep: Putative uncharacterized
protein - Escherichia coli O6
Length = 160
Score = 40.7 bits (91), Expect = 0.030
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = -1
Query: 491 FNCVFCKHRAMKLDWW*GQLFSNICVLQF*CLINCFSFNPFSGKRAXXXXXXXXXXXXFG 312
F+ VFC++R + + FSNI V + F+PF + A
Sbjct: 42 FDRVFCQNRTVNFHRRQFKFFSNIGVFDSLRFVERLPFHPFGDQGAGSDSRTAAVSFKTR 101
Query: 311 INDFSILVHFDLQLHYVSTCRCT 243
+ + + +V F+LQLH+V+T R T
Sbjct: 102 VFNDTFIVDFNLQLHHVATGRRT 124
>UniRef50_O83624 Cluster: Nitrogen fixation protein; n=2;
Treponema|Rep: Nitrogen fixation protein - Treponema
pallidum
Length = 147
Score = 40.7 bits (91), Expect = 0.030
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALK 407
P+CGD + L IK E +I D F GC + AS+++ E +KG +V +A K
Sbjct: 36 PSCGDDLTLLIK-REGDRIADVAFLGTGCAVSTASTNILIELIKGASVAQAQK 87
>UniRef50_Q8F0D6 Cluster: NifU homolog involved in Fe-S cluster
formation; n=4; Leptospira|Rep: NifU homolog involved in
Fe-S cluster formation - Leptospira interrogans
Length = 144
Score = 40.3 bits (90), Expect = 0.039
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEA 401
P CGD ++L I +D N +I + + GC + AS S+ E + GKT+ EA
Sbjct: 37 PLCGDELELTINLDGN-RITEIRVTGKGCSISQASGSMMAESIYGKTIAEA 86
>UniRef50_A1ZYV1 Cluster: SUF system FeS assembly protein, NifU
family; n=1; Microscilla marina ATCC 23134|Rep: SUF
system FeS assembly protein, NifU family - Microscilla
marina ATCC 23134
Length = 142
Score = 39.9 bits (89), Expect = 0.052
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
P CGD +L I + E I A F +GC + AS+S+ + ++GKT+ EA L T
Sbjct: 38 PLCGDHFQLYISL-EGAVIQQAFFHGYGCAVSKASTSVLLQTIEGKTLTEAKTLIET 93
>UniRef50_Q6MEW2 Cluster: Putative iron-sulfur cluster assembly
protein nifU; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Putative iron-sulfur cluster assembly protein
nifU - Protochlamydia amoebophila (strain UWE25)
Length = 263
Score = 39.1 bits (87), Expect = 0.090
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 228 VQASXGAPACGDVMKLQIKVD-ENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEAL 404
++ G A G+ + L VD ++G IVDAKF+ +G + I ++ +A E V GK D+A
Sbjct: 45 IEGREGKLADGNSVILYWLVDPDDGIIVDAKFQAYGQSALIGAAEVACELVIGKNYDQAK 104
Query: 405 KLKNTDIAKELSLPP 449
++ + K++ P
Sbjct: 105 RISVDLLDKQVRDKP 119
>UniRef50_Q8EV25 Cluster: Nitrogen fixation protein NifU; n=1;
Mycoplasma penetrans|Rep: Nitrogen fixation protein NifU
- Mycoplasma penetrans
Length = 148
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +3
Query: 252 ACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDE 398
+C D + L +K +ENG IVD KF GC + AS+ + +K K V++
Sbjct: 47 SCIDNLTLYLK-EENGIIVDVKFSGIGCAISTASTDIFCTMIKNKKVND 94
>UniRef50_Q6YRB5 Cluster: NifU-like protein; n=2; Candidatus
Phytoplasma asteris|Rep: NifU-like protein - Onion
yellows phytoplasma
Length = 145
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +3
Query: 255 CGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 416
CGD + +Q+K D N KI+D K++ C +AS+S+ + +++ T +AL N
Sbjct: 44 CGDKVIIQLKCD-NNKIIDIKYEANVCSICVASASVMSVYLQHLTKTQALNKIN 96
>UniRef50_Q6KIL2 Cluster: Aminotransferase protein U homolog; n=1;
Mycoplasma mobile|Rep: Aminotransferase protein U
homolog - Mycoplasma mobile
Length = 142
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +3
Query: 252 ACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 416
+C D + L +K+ EN +VDAKF+ GC ++S+ + E +K K + + ++ N
Sbjct: 39 SCVDEINLNLKI-ENDFLVDAKFQGVGCAVFLSSADIFLEEIKNKPLSKVNEIAN 92
>UniRef50_Q01180 Cluster: Nitrogen fixation protein nifU; n=4;
Rhodobacter sphaeroides|Rep: Nitrogen fixation protein
nifU - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 246
Score = 38.7 bits (86), Expect = 0.12
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +3
Query: 237 SXGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 416
+ G+ GD ++L +++ E G++ +A+F FG AIA S T V G + A +
Sbjct: 29 TAGSLEVGDAIRLMLRI-EAGRVAEARFLAFGGAHAIACGSALTVLVTGLDLAAARAVTP 87
Query: 417 TDIAKEL-SLPPVKLHCSMLAEDAIKAALSDY 509
+I + LP + + A A++ AL+ Y
Sbjct: 88 EEIEAAVGGLPAPRRPAAARAWSALQIALAAY 119
>UniRef50_Q98R36 Cluster: NITROGEN FIXATION PROTEIN NIFU; n=1;
Mycoplasma pulmonis|Rep: NITROGEN FIXATION PROTEIN NIFU
- Mycoplasma pulmonis
Length = 144
Score = 38.3 bits (85), Expect = 0.16
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = +3
Query: 252 ACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL----KNT 419
+C D + +++++D+N + + F GC I+S+ L E +K K +DE L + KN
Sbjct: 39 SCADSISIKLEIDKN-IVKNISFNGSGCAIFISSTDLLLEQIKNKNIDEVLDIIENYKNM 97
Query: 420 DIAKE 434
AKE
Sbjct: 98 INAKE 102
>UniRef50_Q1WR14 Cluster: IscU protein; n=1; Lactobacillus
salivarius subsp. salivarius UCC118|Rep: IscU protein -
Lactobacillus salivarius subsp. salivarius (strain
UCC118)
Length = 149
Score = 38.3 bits (85), Expect = 0.16
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 228 VQASXGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVD 395
V+ P CGDV+ L +++N KI D F +GC + +S+S+ T V K D
Sbjct: 30 VEVELRNPTCGDVITLTALIEDN-KIKDIAFDGYGCTISQSSASIMTNEVLNKDFD 84
>UniRef50_Q1AZN5 Cluster: SUF system FeS assembly protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: SUF system FeS
assembly protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 140
Score = 37.9 bits (84), Expect = 0.21
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEA 401
P CGD + + + E ++ +A F GC + AS+S+ TE ++GK+ +EA
Sbjct: 35 PLCGDEVTVYARF-EGDRVAEASFTGRGCSISQASASMMTERLRGKSREEA 84
>UniRef50_Q14L11 Cluster: Putative iron-sulfur cluster assembly
protein; n=1; Spiroplasma citri|Rep: Putative
iron-sulfur cluster assembly protein - Spiroplasma citri
Length = 150
Score = 37.9 bits (84), Expect = 0.21
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +3
Query: 252 ACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAK 431
+C D + L++ ++ N KI+ A+F GC + ASS + + ++GK + + L + +A
Sbjct: 42 SCIDDIYLELMIERN-KIISARFDGVGCAISTASSDIMAQELEGKAIKDGLAIIENYLAM 100
Query: 432 ELSLP 446
P
Sbjct: 101 VFDQP 105
>UniRef50_Q5K806 Cluster: Trehalose transport-related protein,
putative; n=1; Filobasidiella neoformans|Rep: Trehalose
transport-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 546
Score = 37.5 bits (83), Expect = 0.28
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = -2
Query: 424 ISVFFNFSASSTVFPLTHSVARELEAIAEPHPKVLNLASTIFPFSSTLICNFIT 263
+ V NFS ++T FP+T+++A E+ A K + L ++ SS +ICN IT
Sbjct: 409 VMVIINFSTNATFFPVTYTIAAEVPA-TRVRAKTMVLGRGVYLISS-IICNQIT 460
>UniRef50_Q9PQ37 Cluster: Conserved hypothetical; n=1; Ureaplasma
parvum|Rep: Conserved hypothetical - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 155
Score = 36.7 bits (81), Expect = 0.48
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +3
Query: 255 CGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKN 416
CGD + + +K++ KI+D F GC +I+S+ + E VK ++ AL L N
Sbjct: 46 CGDDITVYVKLNHQ-KIIDVVFLGTGCAISISSTDIICELVKNLDLNNALLLIN 98
>UniRef50_Q97G09 Cluster: NifU-related domain containing protein;
n=67; Bacteria|Rep: NifU-related domain containing
protein - Clostridium acetobutylicum
Length = 230
Score = 36.7 bits (81), Expect = 0.48
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +3
Query: 246 APACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDI 425
AP G KL + V E G I +A +T GC S+++A+E + GKT+ EAL NTD+
Sbjct: 50 APQQG-ACKLTLNVKE-GVIEEALVETIGCSGMTHSAAMASEILPGKTILEAL---NTDL 104
>UniRef50_Q82UN6 Cluster: NifU-like N terminal domain; n=5;
Bacteria|Rep: NifU-like N terminal domain - Nitrosomonas
europaea
Length = 159
Score = 36.7 bits (81), Expect = 0.48
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEA 401
P CGD ++L I + + G I + F+ C ASSS+ T VKGK+ EA
Sbjct: 36 PLCGDRIELDINMLD-GHIEEIAFQGESCAICKASSSMMTNAVKGKSHQEA 85
>UniRef50_A3LER3 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas aeruginosa 2192|Rep: Putative
uncharacterized protein - Pseudomonas aeruginosa 2192
Length = 197
Score = 36.7 bits (81), Expect = 0.48
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = -1
Query: 482 VFCKHRAMKLDWW*GQLFSNICVLQF*CLINCFSFNPFSGKRAXXXXXXXXXXXXFGIND 303
VF ++ A+ L GQLF + VL L+ + +P G+ A G+ D
Sbjct: 85 VFGENGAVDLHRRQGQLFGDGGVLDGFRLVQGLALHPLGGEGAGGDRGTATVGLELGVFD 144
Query: 302 FSILVHFDLQLHYVSTCR 249
++LV DLQ H+V+ R
Sbjct: 145 HALLVDLDLQAHHVAAGR 162
>UniRef50_Q821N4 Cluster: NifU protein, putative; n=6;
Chlamydophila|Rep: NifU protein, putative -
Chlamydophila caviae
Length = 273
Score = 35.9 bits (79), Expect = 0.84
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +3
Query: 294 NGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVK 455
NGKI+DAKF+ FG + + + V GKT +A L I EL P K
Sbjct: 67 NGKIIDAKFQYFGHPFLLVLAEVTCNLVIGKTYAQAYNLTVNTIDTELRSHPNK 120
>UniRef50_Q0FGM6 Cluster: NifU-related protein involved in Fe-S
cluster formation; n=2; Alphaproteobacteria|Rep:
NifU-related protein involved in Fe-S cluster formation
- alpha proteobacterium HTCC2255
Length = 147
Score = 35.1 bits (77), Expect = 1.5
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 234 ASXGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDE 398
AS +P CG +++ I V+E GKI D C ASSS+ E + G +D+
Sbjct: 35 ASRRSPMCGSNLQVWINVNE-GKITDFSHDVKTCALGQASSSIIAEKIIGLGIDQ 88
>UniRef50_Q73LQ8 Cluster: Putative uncharacterized protein; n=1;
Treponema denticola|Rep: Putative uncharacterized
protein - Treponema denticola
Length = 848
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 387 TVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQ 521
T ++A+K N D A++LS P KLHCS + L + R+++
Sbjct: 757 TDEKAIKKANEDFARKLSYAPEKLHCSSFDSFQQRENLFEMRLER 801
>UniRef50_Q2JM75 Cluster: WD-repeat/protein kinase domain protein;
n=2; Synechococcus|Rep: WD-repeat/protein kinase domain
protein - Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime)
Length = 759
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 369 EWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSM---LAEDAIKAALSD 506
EWV+G T+++AL L N +L+ P ++HC E ++A L D
Sbjct: 109 EWVEGPTLEQALLLGNATERGQLTTPSRQMHCHWGHDWTEAEVRALLQD 157
>UniRef50_A5IXL2 Cluster: Nitrogen fixation protein NifU; n=1;
Mycoplasma agalactiae|Rep: Nitrogen fixation protein
NifU - Mycoplasma agalactiae
Length = 130
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 252 ACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEAL 404
+CGD ++ + EN + D F GC I+S++L +++ T+DE+L
Sbjct: 24 SCGDYLEADYII-ENKILKDLHFNGNGCAYFISSANLLCKYLNSTTIDESL 73
>UniRef50_Q4ZVI2 Cluster: Amino acid adenylation; n=4;
Pseudomonas|Rep: Amino acid adenylation - Pseudomonas
syringae pv. syringae (strain B728a)
Length = 1370
Score = 33.1 bits (72), Expect = 5.9
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +3
Query: 264 VMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSL 443
+M LQ ++ +G GSA A LA EWV+ V L NTD+ + S+
Sbjct: 418 MMVLQNTPGNAARMPGLSMTPYGTGSATAKFDLAFEWVERDGVLSLLVEYNTDLFDQTSI 477
Query: 444 PPVKLHCSMLAE 479
+ H L E
Sbjct: 478 ERLSGHYRQLLE 489
>UniRef50_Q04EW3 Cluster: Fe-S cluster formation protein, NifU-like;
n=1; Oenococcus oeni PSU-1|Rep: Fe-S cluster formation
protein, NifU-like - Oenococcus oeni (strain BAA-331 /
PSU-1)
Length = 146
Score = 33.1 bits (72), Expect = 5.9
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATE 371
P CGDV++LQIKV + I F+ GC + AS+S+ +
Sbjct: 39 PNCGDVLELQIKVSDR-HITAIAFQGQGCTISQASASILAD 78
>UniRef50_A7BC55 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 158
Score = 32.7 bits (71), Expect = 7.8
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +3
Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 410
P CGD + L + +D ++ ++ GC + AS S+ T+ +GK+ +E +L
Sbjct: 37 PTCGDEVTLGVTLDGE-RLASLQWDGDGCSISRASLSMMTDLTQGKSAEEIGRL 89
>UniRef50_Q4P2X4 Cluster: Predicted protein; n=1; Ustilago
maydis|Rep: Predicted protein - Ustilago maydis (Smut
fungus)
Length = 288
Score = 32.7 bits (71), Expect = 7.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 302 FSILVHFDLQLHYVSTCRCTXRGLY 228
++ L H+DL L+YV++C C R Y
Sbjct: 26 YASLTHYDLPLNYVASCGCVARSTY 50
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,396,262
Number of Sequences: 1657284
Number of extensions: 11194068
Number of successful extensions: 27967
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 27034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27907
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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