Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_L09
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0152 - 27041070-27041217,27041939-27041993,27043321-27043633    158   4e-39
05_07_0155 + 28069592-28069925,28071072-28071126,28072448-28072577    154   7e-38
03_05_0679 + 26678131-26679204                                         31   0.80 
01_06_1140 - 34836967-34836996,34837107-34838771                       30   1.4  
08_02_1135 - 24590664-24591231,24591314-24591393,24591523-24591579     29   2.4  
02_04_0314 - 21950400-21950639,21951384-21951680,21951791-219519...    28   5.6  
07_03_0705 - 20846810-20848165                                         28   7.4  

>01_06_0152 - 27041070-27041217,27041939-27041993,27043321-27043633
          Length = 171

 Score =  158 bits (383), Expect = 4e-39
 Identities = 75/94 (79%), Positives = 85/94 (90%), Gaps = 1/94 (1%)
 Frame = +3

Query: 243 GAPACGDVMKLQIKVDEN-GKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
           GAPACGDVMKLQI+VDE+ GKIVDA FKTFGCGSAIASSS+ATEWVKGK ++E + +KNT
Sbjct: 64  GAPACGDVMKLQIRVDESSGKIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVVTIKNT 123

Query: 420 DIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQ 521
           +IAK LSLPPVKLHCSMLAEDAIKAA+ DY  K+
Sbjct: 124 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKK 157



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
 Frame = +2

Query: 80  LINGIRRCMCLKGFGSPNVILAAP-YHANVIDHYENPRNVGSLDKKDKNVGTGL 238
           L  G+RR +   G  +P  +  A  YH  V+DHYENPRNVGS +  D +VGTGL
Sbjct: 10  LAPGLRRVLG-GGAAAPVAVGGAKAYHERVVDHYENPRNVGSFENDDPSVGTGL 62


>05_07_0155 + 28069592-28069925,28071072-28071126,28072448-28072577
          Length = 172

 Score =  154 bits (373), Expect = 7e-38
 Identities = 73/99 (73%), Positives = 87/99 (87%), Gaps = 1/99 (1%)
 Frame = +3

Query: 243 GAPACGDVMKLQIKVDE-NGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNT 419
           GAPACGDVMKLQI+VDE +G+IVDA FKTFGCGSAIASSS+A+EWVKGK +++A  +KN+
Sbjct: 71  GAPACGDVMKLQIRVDEESGRIVDACFKTFGCGSAIASSSVASEWVKGKQMEDAASIKNS 130

Query: 420 DIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQTENK 536
           +IAK LSLPPVKLHCSMLAEDAIKAA+ DY  K+   +K
Sbjct: 131 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKKAKLDK 169



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = +2

Query: 134 VILAAPYHANVIDHYENPRNVGSLDKKDKNVGTGL 238
           V+    YH  V+DHY+NPRNVG+ DK D +VGTGL
Sbjct: 35  VVRRRGYHERVVDHYDNPRNVGTFDKDDPDVGTGL 69


>03_05_0679 + 26678131-26679204
          Length = 357

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = -2

Query: 442 KDSSLAISVFFNFSASSTVFPLTHSVAREL-EAIAEPHPKVLNLASTIFPFSSTLICNFI 266
           + +S   SV F+F ASS+  P   +  REL + +    P   +LA  ++PF  + +   I
Sbjct: 86  RHASCPESVHFHFLASSSSSPEAAAAVRELRDTVRASFP---SLAFRVYPFDESRVAGLI 142

Query: 265 TSPHAGAPXEACTYIFIFL 209
           ++   GA      Y   +L
Sbjct: 143 STSIRGALDRPLNYARSYL 161


>01_06_1140 - 34836967-34836996,34837107-34838771
          Length = 564

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +3

Query: 249 PACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKL 410
           PAC     LQ+  + +G IV +     G   + A ++L   + K   +DEA ++
Sbjct: 314 PACAQTAALQVGREVHGYIVTSGLACHGALDSFACNALVDMYAKSGALDEARRI 367


>08_02_1135 - 24590664-24591231,24591314-24591393,24591523-24591579
          Length = 234

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 445 GKDSSLAISVFFNFSASSTVFPLTHSVARELEAIAEPHPK 326
           G ++ L       +   +TV+P  H   REL  I + HPK
Sbjct: 7   GSNTLLKSDSILEYVLDTTVYPREHERLRELRLITQNHPK 46


>02_04_0314 -
           21950400-21950639,21951384-21951680,21951791-21951920,
           21952377-21952699,21953385-21953606,21953693-21954089,
           21954488-21954540
          Length = 553

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 414 NTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQTEN 533
           + D+A    LPP  + C ++ ED   A L   R+  + EN
Sbjct: 282 SVDLAMLAGLPPAAVLCEIVDEDGSMARLPKLRVFAEREN 321


>07_03_0705 - 20846810-20848165
          Length = 451

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = -2

Query: 352 EAIAEPHPKVLNLASTIF---PFSSTLICNFITSPHAGAPXEACTYIF 218
           E  A P P     +S+ F   P +S+L C F+TSP+       C Y +
Sbjct: 123 ECAARPAPPFQPASSSTFSKLPCASSL-CQFLTSPYLTCNATGCVYYY 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,353,062
Number of Sequences: 37544
Number of extensions: 296702
Number of successful extensions: 731
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)