Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_L08
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79600-7|CAI79194.1|  173|Caenorhabditis elegans Hypothetical pr...    77   8e-15
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical...    31   0.94 
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ...    29   3.8  
Z32682-6|CAA83614.1|  200|Caenorhabditis elegans Hypothetical pr...    28   5.0  

>Z79600-7|CAI79194.1|  173|Caenorhabditis elegans Hypothetical
           protein F59C6.12 protein.
          Length = 173

 Score = 77.4 bits (182), Expect = 8e-15
 Identities = 33/65 (50%), Positives = 45/65 (69%)
 Frame = +3

Query: 138 LFLDDARIKNFTSCXXXXXXXXXXXXRIRLNKTGKYEAEFPFVSHCGRERNYIRCDDLPI 317
           LFLDD+R+KNFT+             +I+ NKTG+YE  FP+VS CG ERN++RCDD P+
Sbjct: 32  LFLDDSRMKNFTAAYKDIQFLNFFYRKIKENKTGRYEDTFPWVSLCGIERNFLRCDDTPL 91

Query: 318 VFTHI 332
           V+T +
Sbjct: 92  VYTEL 96


>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
           protein Y39B6A.30 protein.
          Length = 1408

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 23/62 (37%), Positives = 30/62 (48%)
 Frame = -3

Query: 289 LRSLPQ*DTKGNSASYLPVLFSLIRLKKNSRNFFSLKHEVKFFILASSKNSXXXXXXLNH 110
           L SL Q D  G SAS L  +FSL+ L+ +     S+   VK  I  SS  S       NH
Sbjct: 603 LESLNQSDGIGISASALQNIFSLLDLESSINQLKSVDGIVKVGIDKSSNKSELKSLWGNH 662

Query: 109 DN 104
           ++
Sbjct: 663 NH 664


>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
           protein Y80D3A.8 protein.
          Length = 1293

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 22/62 (35%), Positives = 31/62 (50%)
 Frame = -3

Query: 289 LRSLPQ*DTKGNSASYLPVLFSLIRLKKNSRNFFSLKHEVKFFILASSKNSXXXXXXLNH 110
           L+SL Q D  G SAS L  +FSL+ L+ +     S+   VK  I  SS  S       +H
Sbjct: 622 LKSLNQSDGIGISASALRNVFSLLDLESSINQLKSVDGIVKVGIDKSSNKSELQSLWGSH 681

Query: 109 DN 104
           ++
Sbjct: 682 ND 683


>Z32682-6|CAA83614.1|  200|Caenorhabditis elegans Hypothetical
           protein M04D8.6 protein.
          Length = 200

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 7   ILYFVPTYQPYLRRNFILVQESAYLNI 87
           ++Y++P Y PY    F+L    A  NI
Sbjct: 48  LIYYIPKYYPYFLNQFLLTIAFALFNI 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,634,127
Number of Sequences: 27780
Number of extensions: 267383
Number of successful extensions: 452
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)