Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_L03
(581 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0078 + 5476288-5476626,5477474-5477670,5477750-5477885,547... 115 2e-26
03_06_0576 + 34832900-34832911,34833006-34833122,34833752-348338... 56 2e-08
08_01_0011 - 81673-81724,81826-82161,82426-82556,82629-82729,828... 49 3e-06
01_06_0906 + 32886693-32886919,32887589-32887708,32887978-328881... 38 0.008
09_05_0016 + 20089545-20089748,20090072-20090263,20090644-200908... 34 0.072
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 28 4.7
08_02_1337 - 26238506-26238737,26239728-26240703,26241266-26242802 28 6.2
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 27 8.2
02_05_1312 + 35642687-35642923,35643712-35643831,35644468-356445... 27 8.2
>03_02_0078 +
5476288-5476626,5477474-5477670,5477750-5477885,
5478055-5478132,5478227-5478280,5478466-5478650,
5478781-5480374,5480506-5480700,5480753-5480904,
5481213-5481486,5481597-5481733,5482219-5482258,
5482773-5483261,5483605-5484168
Length = 1477
Score = 115 bits (277), Expect = 2e-26
Identities = 58/156 (37%), Positives = 88/156 (56%)
Frame = +1
Query: 19 MGVTGLWRLIEPTGKPVPVETLENKVLAVDISIWLHQMVKGYQDAKGAPLXNAHLMGLFQ 198
MGV GLW L+ P G+ V VETL K LAVD SIW+ Q ++ +D KG + +AHL+G +
Sbjct: 1 MGVHGLWELLAPVGRRVSVETLAGKRLAVDASIWMVQFMRAMRDDKGDMIRDAHLLGFLR 60
Query: 199 RLCKLLYFRIKPIFVFDGGFPDLKKETISKRQDHKVKYNSESERIKRELALLLSKKTAIN 378
R+CKLL+ R +P+FVFDG P LK+ T++ R+ H+ ++ + +L L K +
Sbjct: 61 RICKLLFLRARPVFVFDGATPALKRRTLAARRRHRDAAQAKVRKTAEKLLLSHLKARKLE 120
Query: 379 SLLGKQISPKKNVAQTENEDNIFKLPELPKKNQESE 486
L + S + + K+ E+ K N E +
Sbjct: 121 ELAAQIKSDRAKHDNKGKQVESSKMGEIEKINGEQK 156
>03_06_0576 +
34832900-34832911,34833006-34833122,34833752-34833810,
34833901-34833960,34834197-34834250,34834332-34834380,
34834493-34834540,34834889-34834954,34835591-34835641,
34835732-34835851,34835921-34836005,34836428-34836509,
34836666-34836774,34837005-34837051,34837131-34837188,
34839114-34839220,34839700-34839765,34839833-34839879,
34839977-34840042,34840146-34840243,34840344-34840469,
34840551-34840835,34840920-34840985,34841079-34841228
Length = 675
Score = 56.4 bits (130), Expect = 2e-08
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Frame = +1
Query: 19 MGVTGLWRLI--EPTGKPVP--VETLENKVLAVDISIWLHQMV-----KGYQDAKG-APL 168
MG+ GL +L+ G V VE +V+A+D S+ ++Q + KG + A
Sbjct: 1 MGIKGLTKLLAEHAPGAAVRRRVEDYRGRVVAIDTSLSIYQFLIVVGRKGTEVLTNEAGE 60
Query: 169 XNAHLMGLFQRLCKLLYFRIKPIFVFDGGFPDLKKETISKRQDHKVKYNSESERIKREL 345
+HL G+ R ++L IKP+FVFDG PD+KK+ ++KR +K + SE + R +
Sbjct: 61 VTSHLQGMLNRTVRILEAGIKPVFVFDGEPPDMKKKELAKR---SLKRDGSSEDLNRAI 116
>08_01_0011 -
81673-81724,81826-82161,82426-82556,82629-82729,
82849-82931,83154-83253,83366-83513,83664-83723,
84272-84345,84482-84554,84648-84699,84764-84897,
85096-85288,85386-85453
Length = 534
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +1
Query: 19 MGVTGLWRLIEPTGKPVPVETLENKVLAVDISIWLHQMVKGYQDAKGAPLXNAHLMGLFQ 198
MGV LW ++E K +P+ L+NK + VD+S WL QM + A +L LF
Sbjct: 1 MGVKNLWDILESCKKKLPLHHLQNKKVCVDLSCWLVQMYSANRSPAFAK-DKVYLKNLFH 59
Query: 199 RLCKLLYFRIKPIFV 243
R+ LL +FV
Sbjct: 60 RIRALLALNCTLLFV 74
>01_06_0906 +
32886693-32886919,32887589-32887708,32887978-32888101,
32888224-32888361,32888492-32888701,32889085-32889232,
32890452-32890801,32890909-32890963,32891087-32891382,
32891480-32891531,32891740-32891947,32892064-32892446,
32894102-32894538,32895452-32895643
Length = 979
Score = 37.5 bits (83), Expect = 0.008
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Frame = +1
Query: 19 MGVTGLWRLIEPTGKPVPVETLENKVLAVDISIWLHQ--MVKGYQDAKGAP--------- 165
MG+ GL ++ P+ VE L+ + +AVD WLH+ + G + KG P
Sbjct: 1 MGIQGLLPQLKSIMAPIGVEALKGQTVAVDTYSWLHKGALSCGDRLCKGLPTTRFGSGDL 60
Query: 166 ------------LXNAHLMGLFQRLCKLLYFRIKPIFVFDGGFPDLKKETISKRQ 294
+ H+ R+ L + +KPI VFDGG +K + +KR+
Sbjct: 61 PPFLGTQGFLIHFADWHIEYCMHRVNMLRHHGVKPILVFDGGHLPMKGDQETKRE 115
>09_05_0016 +
20089545-20089748,20090072-20090263,20090644-20090814,
20090915-20091096,20091189-20091435,20091776-20091908,
20092070-20092599,20092940-20093170
Length = 629
Score = 34.3 bits (75), Expect = 0.072
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +1
Query: 19 MGVTG-LWRLIEPTGKPVPVETLENKVLAVDISIWLHQMVKGYQDAKGAPLXNAHLMGLF 195
MGV G W L++P + L + +AVD+S W+ + A+ HL LF
Sbjct: 1 MGVGGSFWDLLKPYARHEGAGYLRGRRVAVDLSFWVVSHSAAIR-ARSPHARLPHLRTLF 59
Query: 196 QRLCKLL-YFRIKPIFVFDGGFPDLKKETISKR 291
R L P+FV DG LK + + R
Sbjct: 60 FRTLSLFSKMGAFPVFVVDGQPSPLKSQVRAAR 92
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 28.3 bits (60), Expect = 4.7
Identities = 26/86 (30%), Positives = 40/86 (46%)
Frame = +1
Query: 262 DLKKETISKRQDHKVKYNSESERIKRELALLLSKKTAINSLLGKQISPKKNVAQTENEDN 441
+L+K IS ++H +E ++ E L+L++ L KQI K TE E
Sbjct: 252 ELEKLNISTEEEHLKCMQAEMAQLSLEKQLILAQDKMRLLALEKQIEVSK-AKDTETE-K 309
Query: 442 IFKLPELPKKNQESESEYVK*NNQLH 519
+ EL K +ES S N+Q+H
Sbjct: 310 VMLEKELEKIQKESTSL----NDQIH 331
>08_02_1337 - 26238506-26238737,26239728-26240703,26241266-26242802
Length = 914
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 241 VFDGGFPDLKKETISKRQDHKVKYNSESERIKRELALLLSKKTAINSLL 387
V D F LK T +K + NSE++ R L ++ + INSL+
Sbjct: 555 VLDNAFSGLKVSTEAKMVISSAEINSENKGKARSLDIIYDEAEDINSLV 603
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 265 LKKETISKRQDHKVKYNSESERIKRELALLLSKK 366
L ++ +K ++ VKY +K EL LLSKK
Sbjct: 856 LNRDFFNKEKNQMVKYGLRPRTLKGELFALLSKK 889
>02_05_1312 +
35642687-35642923,35643712-35643831,35644468-35644534,
35644673-35644694,35645053-35645152,35645282-35645414,
35645483-35645517,35645708-35646409,35646789-35647121,
35647337-35647601,35647665-35647999,35648105-35648177,
35648271-35648356,35648479-35648598,35648674-35648741,
35648825-35648882
Length = 917
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/80 (23%), Positives = 38/80 (47%)
Frame = +1
Query: 268 KKETISKRQDHKVKYNSESERIKRELALLLSKKTAINSLLGKQISPKKNVAQTENEDNIF 447
+++ KR K K + E+ + R A + K +N + K + KK + E+N+
Sbjct: 96 RRDAGKKRGPRKKKVDQENIKTHRHNANAVKGKMLVNDKVSK--TEKK-----QREENVD 148
Query: 448 KLPELPKKNQESESEYVK*N 507
+ P+LP+ ++ Y + N
Sbjct: 149 RYPDLPENEFAAKCPYCRKN 168
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,371,794
Number of Sequences: 37544
Number of extensions: 280074
Number of successful extensions: 670
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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