Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_L03
(581 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical ... 93 1e-19
U13019-9|AAC24447.1| 434|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AY303575-1|AAP57297.1| 382|Caenorhabditis elegans cell death-re... 46 1e-05
AC024791-9|AAF60653.1| 382|Caenorhabditis elegans Cell-death-re... 46 1e-05
Z93382-2|CAB07612.2| 639|Caenorhabditis elegans Hypothetical pr... 35 0.048
AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation... 31 0.45
AL117193-7|CAB60301.2| 346|Caenorhabditis elegans Hypothetical ... 31 0.79
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 30 1.0
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 30 1.0
U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain (pr... 30 1.4
U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain (pr... 30 1.4
Z49126-1|CAA88938.2| 605|Caenorhabditis elegans Hypothetical pr... 29 1.8
U80839-2|AAW88386.1| 346|Caenorhabditis elegans Serpentine rece... 29 2.4
U80839-1|AAB37913.3| 337|Caenorhabditis elegans Serpentine rece... 29 2.4
AC087794-2|AAG53703.2| 840|Caenorhabditis elegans Hypothetical ... 29 2.4
Z81074-3|CAB03039.2| 352|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z77652-13|CAB01120.2| 308|Caenorhabditis elegans Hypothetical p... 28 4.2
Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical p... 27 7.4
Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical pr... 27 7.4
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 9.7
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 9.7
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 9.7
AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical... 27 9.7
>AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical
protein F57B10.6 protein.
Length = 829
Score = 93.1 bits (221), Expect = 1e-19
Identities = 46/118 (38%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Frame = +1
Query: 19 MGVTGLWRLIEPTGKPVPVETLENKVLAVDISIWLHQMVKGYQDAKGAPLXNAHLMGLFQ 198
MG+TGLW+++EPT +P+E LE K LA+D+SIW++Q Y + P HL L
Sbjct: 1 MGITGLWKIVEPTATEIPLECLEGKKLAIDVSIWIYQAQLAYPSDQPFP----HLRLLVN 56
Query: 199 RLCKLLYFRIKPIFVFDG-GFPDLKKETISKRQDHKVKYNSESERIKRELALLLSKKT 369
RL KLL+++I+P+FVFDG P LK++ + R+ + + + K+ L + KK+
Sbjct: 57 RLSKLLFYKIRPVFVFDGPQVPPLKRQVLEARRQKRQNDDDILKNSKKMGKLKVLKKS 114
>U13019-9|AAC24447.1| 434|Caenorhabditis elegans Hypothetical
protein T12A2.8 protein.
Length = 434
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/77 (36%), Positives = 45/77 (58%)
Frame = +1
Query: 19 MGVTGLWRLIEPTGKPVPVETLENKVLAVDISIWLHQMVKGYQDAKGAPLXNAHLMGLFQ 198
M + G+W + VP ET+ +K L++D IWL++ +KG +A N++L+ F
Sbjct: 1 MTINGIWEWANHVVRKVPNETMRDKTLSIDGHIWLYESLKGC-EAHHQQTPNSYLVTFFT 59
Query: 199 RLCKLLYFRIKPIFVFD 249
R+ +LL +I PI VFD
Sbjct: 60 RIQRLLELKIIPIVVFD 76
>AY303575-1|AAP57297.1| 382|Caenorhabditis elegans cell
death-related nuclease 1 protein.
Length = 382
Score = 46.4 bits (105), Expect = 1e-05
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Frame = +1
Query: 19 MGVTGLWRLIEPTGKPVPVETLENKV-----LAVDISIWLHQ-MVKGYQDAKGAPLXN-- 174
MG+ GL ++I P ++ E K +A+D S+ L+Q ++ QD +
Sbjct: 1 MGIKGLSQVIADNA-PSAIKVNEMKAFFGRTVAIDASMCLYQFLIAVRQDGSQLQSEDGE 59
Query: 175 --AHLMGLFQRLCKLLYFRIKPIFVFDGGFPDLKKETISKRQDHKVK 309
+HLMG+ R ++ +KP++VFDG PD+K + KR + + +
Sbjct: 60 TTSHLMGMLNRTVRMFENGVKPVYVFDGKPPDMKGGELEKRSERRAE 106
>AC024791-9|AAF60653.1| 382|Caenorhabditis elegans
Cell-death-related nuclease protein1 protein.
Length = 382
Score = 46.4 bits (105), Expect = 1e-05
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Frame = +1
Query: 19 MGVTGLWRLIEPTGKPVPVETLENKV-----LAVDISIWLHQ-MVKGYQDAKGAPLXN-- 174
MG+ GL ++I P ++ E K +A+D S+ L+Q ++ QD +
Sbjct: 1 MGIKGLSQVIADNA-PSAIKVNEMKAFFGRTVAIDASMCLYQFLIAVRQDGSQLQSEDGE 59
Query: 175 --AHLMGLFQRLCKLLYFRIKPIFVFDGGFPDLKKETISKRQDHKVK 309
+HLMG+ R ++ +KP++VFDG PD+K + KR + + +
Sbjct: 60 TTSHLMGMLNRTVRMFENGVKPVYVFDGKPPDMKGGELEKRSERRAE 106
>Z93382-2|CAB07612.2| 639|Caenorhabditis elegans Hypothetical
protein F45G2.3 protein.
Length = 639
Score = 34.7 bits (76), Expect = 0.048
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Frame = +1
Query: 19 MGVTGLWRLIEPTGKPVPVETLENKVLAVDISIWLHQMVKGYQDAKGAPLXNAHLMGLFQ 198
MG++GL ++ + + L K +A+D+S LH+ + G D +
Sbjct: 1 MGISGLLPFVKNACRKGNILELRGKSVAIDVSCLLHRGLTGCMDKIHMGEETQSYVNYVN 60
Query: 199 RLCK-LLYFRIKPIFVFDGGFPDLKKETISKRQDHKVKYNSESERI 333
+ K LL + VFDG KK T +R++ + K +E +
Sbjct: 61 KYVKELLGMGCHVVMVFDGRPLPAKKGTNEERRELREKRKEHAEML 106
>AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation
defective protein 1 protein.
Length = 620
Score = 31.5 bits (68), Expect = 0.45
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 215 STSG*NQFSYLMVAFQT*RKKQFLKDKITR*NIIQNLKE*REN*LY 352
+ SG + SYL T R +FLKD R +I+++ K+ EN LY
Sbjct: 536 AASGGSLHSYLAKQIGTARNAEFLKDTDVRASILKHAKDAEENPLY 581
>AL117193-7|CAB60301.2| 346|Caenorhabditis elegans Hypothetical
protein Y105C5A.11 protein.
Length = 346
Score = 30.7 bits (66), Expect = 0.79
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = -1
Query: 503 HFTYSDSLSWFFFGSSGNLNILSSFSV*ATFFFGEICLPSKLLIAVFLLKS----RANSL 336
+F+Y D L + S + + + V AT+ + L S ++ +F K R N
Sbjct: 10 NFSYDDPLPFTCNEDSHVMLSVLEYLVQATYLSLSVVLNSMIVYTIFRFKGNHSYRGNPF 69
Query: 335 FILSDSELYFTL*SCLLEIV 276
F+L +E + SC++E++
Sbjct: 70 FVLYAAEAVMNVYSCVIEVL 89
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +1
Query: 250 GGFPDLK-KETISKRQDHKVKYNSESERIKRELALLLSKKTAINSLLGKQI--SPKKNVA 420
G +P+ ET K Q K K SE+ I + + S+K +N L+ ++ SP+K+
Sbjct: 867 GSYPEKNGSETAEKAQILK-KNGSETAEIAEKAQI--SEKKPVNRLVIDEVLKSPQKSEK 923
Query: 421 QTENEDNIFKLPELPKKNQES 483
E I ++ E PKK++++
Sbjct: 924 IPEKAQEIEEIEESPKKSEKA 944
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +1
Query: 250 GGFPDLK-KETISKRQDHKVKYNSESERIKRELALLLSKKTAINSLLGKQI--SPKKNVA 420
G +P+ ET K Q K K SE+ I + + S+K +N L+ ++ SP+K+
Sbjct: 865 GSYPEKNGSETAEKAQILK-KNGSETAEIAEKAQI--SEKKPVNRLVIDEVLKSPQKSEK 921
Query: 421 QTENEDNIFKLPELPKKNQES 483
E I ++ E PKK++++
Sbjct: 922 IPEKAQEIEEIEESPKKSEKA 942
>U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform b protein.
Length = 643
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 74 TGTGFPVGSINRHNPVTPIVTDKS 3
T G P G++N H P +P + DKS
Sbjct: 291 TAAGTPTGTLNGHGPGSPSIMDKS 314
>U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform a protein.
Length = 635
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 74 TGTGFPVGSINRHNPVTPIVTDKS 3
T G P G++N H P +P + DKS
Sbjct: 283 TAAGTPTGTLNGHGPGSPSIMDKS 306
>Z49126-1|CAA88938.2| 605|Caenorhabditis elegans Hypothetical
protein DH11.1 protein.
Length = 605
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +1
Query: 271 KETISKRQDHKVKYNSESERIKRELALLLSKKTAINSLLGKQISPKKNVAQTENEDNIFK 450
K T K +++ E + + +SK + N+L G +P + +ED IF+
Sbjct: 4 KPTTQKSVMYRIPSERTLESLHEMIGSRMSKMSLKNTLRGIS-NPYERDENEGSEDMIFE 62
Query: 451 LPELPKKNQES 483
L ++P KN+ S
Sbjct: 63 LFKIPNKNEAS 73
>U80839-2|AAW88386.1| 346|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 20, isoform b protein.
Length = 346
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = -1
Query: 503 HFTYSDSLSWFFFGSSGNLNILSSFSV*ATFFFGEICLPSKLLIAVFLLKS----RANSL 336
+F+Y D L + S + + + V AT+ L S ++ +F K R N
Sbjct: 10 NFSYDDPLPFTCNQDSHVMLSILEYLVQATYLSVSAVLNSMIVYTIFRCKGKHSYRRNPF 69
Query: 335 FILSDSELYFTL*SCLLEIV 276
F+L +E + SC++E++
Sbjct: 70 FVLYAAEAVMNVYSCVIEVL 89
>U80839-1|AAB37913.3| 337|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 20, isoform a protein.
Length = 337
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = -1
Query: 503 HFTYSDSLSWFFFGSSGNLNILSSFSV*ATFFFGEICLPSKLLIAVFLLKS----RANSL 336
+F+Y D L + S + + + V AT+ L S ++ +F K R N
Sbjct: 10 NFSYDDPLPFTCNQDSHVMLSILEYLVQATYLSVSAVLNSMIVYTIFRCKGKHSYRRNPF 69
Query: 335 FILSDSELYFTL*SCLLEIV 276
F+L +E + SC++E++
Sbjct: 70 FVLYAAEAVMNVYSCVIEVL 89
>AC087794-2|AAG53703.2| 840|Caenorhabditis elegans Hypothetical
protein Y32G9A.6 protein.
Length = 840
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/80 (23%), Positives = 41/80 (51%)
Frame = +1
Query: 262 DLKKETISKRQDHKVKYNSESERIKRELALLLSKKTAINSLLGKQISPKKNVAQTENEDN 441
+LK E +R+ E+ER K+E+A + + + +PK+ +++ + N
Sbjct: 436 ELKAEQKKQRRPSTSDGIVETER-KKEIADVGVNTSQRSIKSADSNAPKRKYSKSTSVTN 494
Query: 442 IFKLPELPKKNQESESEYVK 501
+ ++P +PKK E+ E ++
Sbjct: 495 LTEIPSIPKKELEALKESIE 514
>Z81074-3|CAB03039.2| 352|Caenorhabditis elegans Hypothetical
protein F32B6.3 protein.
Length = 352
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 286 KRQDHKVKYNSESERIKRELALLLSKKTAINSLLGKQISPKKNVAQTENEDNI 444
K D ++K N E ER ++E+A SKK ++ + ++ S + A ENE I
Sbjct: 32 KGADLEMKRNQEYERKQQEIA---SKKRKVDDEILQESSSRTKPAPVENESEI 81
>Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical
protein F25H5.5 protein.
Length = 725
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 247 DGGFPDLKKETISKRQDHKVKYNSESERIKRELALLLSKKTAINSLLG 390
+G D+ +RQ+HK+ E+++ +RELA L + A L G
Sbjct: 499 EGDADDVPDNDTIRRQNHKLLLKQENDKEQRELAKLQDRLLADGDLGG 546
>Z77652-13|CAB01120.2| 308|Caenorhabditis elegans Hypothetical
protein C06B3.11 protein.
Length = 308
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -1
Query: 473 FFFGSSGNLNILSSFSV*ATFFFGEICLPSKLLIAVFLLKSRANSLFILSDSELYFTL 300
FFFG + NLNI+ +S + FG IC+ ++ + L N L ++ Y T+
Sbjct: 69 FFFGYTLNLNIVIDYS----YIFGGICIIMLHIVLISFLMISFNRLCAVAFPIAYQTV 122
>Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 331 IKRELALLLSKKTAINSLLGKQISPKKNVAQTENEDNIFKLPELPKKNQESES 489
+K LA+L KK + K +SP + + ++ED + K N++S +
Sbjct: 427 VKNRLAMLQQKKKTLELDAQKPMSPNPAIEKKKSEDRRNNMDRRNKTNRKSHT 479
>Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 331 IKRELALLLSKKTAINSLLGKQISPKKNVAQTENEDNIFKLPELPKKNQESES 489
+K LA+L KK + K +SP + + ++ED + K N++S +
Sbjct: 427 VKNRLAMLQQKKKTLELDAQKPMSPNPAIEKKKSEDRRNNMDRRNKTNRKSHT 479
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 246 KYENWFYPEVEKFAKPLE 193
K W YP V+KF KP+E
Sbjct: 6766 KKGEWVYPLVDKFGKPVE 6783
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 246 KYENWFYPEVEKFAKPLE 193
K W YP V+KF KP+E
Sbjct: 7485 KKGEWVYPLVDKFGKPVE 7502
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 246 KYENWFYPEVEKFAKPLE 193
K W YP V+KF KP+E
Sbjct: 10022 KKGEWVYPLVDKFGKPVE 10039
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 246 KYENWFYPEVEKFAKPLE 193
K W YP V+KF KP+E
Sbjct: 6811 KKGEWVYPLVDKFGKPVE 6828
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 246 KYENWFYPEVEKFAKPLE 193
K W YP V+KF KP+E
Sbjct: 7530 KKGEWVYPLVDKFGKPVE 7547
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 246 KYENWFYPEVEKFAKPLE 193
K W YP V+KF KP+E
Sbjct: 10067 KKGEWVYPLVDKFGKPVE 10084
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 246 KYENWFYPEVEKFAKPLE 193
K W YP V+KF KP+E
Sbjct: 6811 KKGEWVYPLVDKFGKPVE 6828
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 246 KYENWFYPEVEKFAKPLE 193
K W YP V+KF KP+E
Sbjct: 7530 KKGEWVYPLVDKFGKPVE 7547
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 246 KYENWFYPEVEKFAKPLE 193
K W YP V+KF KP+E
Sbjct: 10067 KKGEWVYPLVDKFGKPVE 10084
>AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical
protein Y73B6BL.1 protein.
Length = 751
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 550 INHLQNLKYNNVIGYFILHTLIHSPGSSSG 461
+N L+N + +N+ + LHTL+H P S+ G
Sbjct: 120 MNGLKNRQIDNITAWD-LHTLVHYPDSAPG 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,156,437
Number of Sequences: 27780
Number of extensions: 276947
Number of successful extensions: 837
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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