Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_K20
         (440 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88178-7|ABA03111.1|  439|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AC006676-2|AAK71382.3|  439|Caenorhabditis elegans Hypothetical ...    29   1.5  
Z78198-8|CAB01574.2|  333|Caenorhabditis elegans Hypothetical pr...    28   2.6  
AC025716-15|AAO21409.1|  521|Caenorhabditis elegans Udp-glucuron...    27   4.6  

>U88178-7|ABA03111.1|  439|Caenorhabditis elegans Hypothetical
           protein W09C3.1 protein.
          Length = 439

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 197 IASAGPGLLWKIYKGYKKSTKQEASIFVFEKKQLDRWQKADRDIM 331
           I   G G    +Y    KSTKQEA++ + +    D   K +R+IM
Sbjct: 36  IRELGRGAFGTVYHVSNKSTKQEAALKIEKMTAGDNLLKFEREIM 80


>AC006676-2|AAK71382.3|  439|Caenorhabditis elegans Hypothetical
           protein M04F3.3 protein.
          Length = 439

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 197 IASAGPGLLWKIYKGYKKSTKQEASIFVFEKKQLDRWQKADRDIM 331
           I   G G    +Y    KSTKQEA++ +      D   K +R+IM
Sbjct: 36  IRELGRGAFGTVYHVSNKSTKQEAALKIERMTAGDNLLKIEREIM 80


>Z78198-8|CAB01574.2|  333|Caenorhabditis elegans Hypothetical
           protein F55C5.9 protein.
          Length = 333

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 311 SAICLIAFSQTQILMLLVLWTFCIPCIFSIV 219
           S++    FS + ++  ++ W  CI C FS++
Sbjct: 185 SSVLAAPFSDSVMISTMITWLACIICAFSVI 215


>AC025716-15|AAO21409.1|  521|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein31 protein.
          Length = 521

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +2

Query: 95  VFNKFYSSVSNTVSQLSGVLPGNPVTREFEATQFIASAGP 214
           VF+K Y+  + T++ L    P +P     + T+F+ + GP
Sbjct: 434 VFDKSYAKNAKTLANLLNASPFSPKELVVKNTEFVGNFGP 473


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,166,850
Number of Sequences: 27780
Number of extensions: 171992
Number of successful extensions: 483
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)