Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_K20
         (440 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.0  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    23   2.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   2.6  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    22   3.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   4.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   6.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   6.0  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 219 RPGPALAMNCVASNS 175
           +PGP++ + CVAS +
Sbjct: 406 QPGPSMFLKCVASGN 420


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 330 IMSLSAFCHLSNCFFSNTN 274
           I SLS  C+ SN +++N N
Sbjct: 304 ISSLSNSCNYSNNYYNNNN 322


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 297 NCFFSNTNIDASCFVDFLYPLYI 229
           N    N+ +DAS  + F YP+ +
Sbjct: 804 NLLVCNSYVDASYMIAFAYPIML 826


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 356 IQLTKLRHPADL*LYS 403
           + LTKL  PADL +Y+
Sbjct: 520 VNLTKLHPPADLVVYA 535


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +2

Query: 8   WVRALMNCLIKIYYLFLL 61
           +  A+M+C + +YY+ +L
Sbjct: 64  YAAAVMSCWMNVYYIVIL 81


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 436  R*ALHDSLRGYAVQLKI 386
            R ALH++LRG   QL I
Sbjct: 1146 RAALHEALRGRTAQLII 1162


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 225 HSRPGPALAMNCV 187
           HSRP PA   +CV
Sbjct: 398 HSRPVPAKKYDCV 410


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 219 RPGPALAMNCVASNS 175
           +PGPA+++ C A+ +
Sbjct: 434 QPGPAVSLKCSAAGN 448



 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 223  MENIQGIQKVHKTRSINI 276
            +EN QG  K+H T ++ +
Sbjct: 1386 VENAQGNDKLHYTLTVQV 1403


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 219 RPGPALAMNCVASNS 175
           +PGPA+++ C A+ +
Sbjct: 434 QPGPAVSLKCSAAGN 448



 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 223  MENIQGIQKVHKTRSINI 276
            +EN QG  K+H T ++ +
Sbjct: 1382 VENAQGNDKLHYTLTVQV 1399


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 225 HSRPGPALAMNCV 187
           HSRP PA   +CV
Sbjct: 398 HSRPVPAKKYDCV 410


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,812
Number of Sequences: 438
Number of extensions: 2071
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)