Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_K19
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            27   0.52 
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   2.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   4.8  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 27.1 bits (57), Expect = 0.52
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -1

Query: 486 YSSSTQAPIRPVAVSFFITSKGNRPSKSCFAAFGFKYLSANSLDN 352
           Y + TQ  +R ++V  F  S   R SK C ++     L  N++DN
Sbjct: 180 YLNLTQNRLRDLSVFHFSASLSTRLSKKCGSSIVTLDLPQNTIDN 224


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 330 SVS*LVKLLHWDANAFTQDDESKLLSLID 244
           S++ L+   H+   A+T DD  +LLS ID
Sbjct: 302 SIATLMSNEHFHDIAYTADDREELLSAID 330


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
 Frame = +1

Query: 580 TTSWY--ANLVNEKGTPEQKELFLKDY 654
           T SW   A  + +KG P Q    L+DY
Sbjct: 583 TASWQCIATALEDKGVPRQLRNILRDY 609


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,487
Number of Sequences: 2352
Number of extensions: 10385
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)