Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_K19
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +3

Query: 51  LNIFYSRY*TKIKSLSN 101
           LN+FY+ + + IKS+SN
Sbjct: 527 LNMFYNNFNSDIKSISN 543


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +3

Query: 51  LNIFYSRY*TKIKSLSN 101
           LN+FY+ + + IKS+SN
Sbjct: 527 LNMFYNNFNSDIKSISN 543


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 570 VSIHNFLVRELGERKGNSRTEGTVPEG 650
           V  HN L+  L E   + + EG  PEG
Sbjct: 646 VLAHNDLMSPLDEPAVHIKQEGQSPEG 672


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,792
Number of Sequences: 438
Number of extensions: 3302
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)