Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_K15
         (668 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3385|AAN11116.1|  381|Drosophila melanogaster CG31622-P...    30   3.3  
AE014298-1485|AAF46620.2|  638|Drosophila melanogaster CG11556-P...    28   10.0 
AB112927-1|BAD07032.1|  184|Drosophila melanogaster rabphilin pr...    28   10.0 

>AE014134-3385|AAN11116.1|  381|Drosophila melanogaster CG31622-PD,
           isoform D protein.
          Length = 381

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 166 GDCYVGLRLR*CSVDTLVECKQ*YIHRYR 252
           G+CY  + +R CS+ T++   Q YI R+R
Sbjct: 77  GNCYALINIRSCSIVTMLIYTQLYIQRFR 105


>AE014298-1485|AAF46620.2|  638|Drosophila melanogaster CG11556-PA
           protein.
          Length = 638

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 469 LPKYDIP*STSATPV 513
           LPKYD+P S SATP+
Sbjct: 157 LPKYDMPRSASATPI 171


>AB112927-1|BAD07032.1|  184|Drosophila melanogaster rabphilin
           protein.
          Length = 184

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 469 LPKYDIP*STSATPV 513
           LPKYD+P S SATP+
Sbjct: 157 LPKYDMPRSASATPI 171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,376,019
Number of Sequences: 53049
Number of extensions: 495999
Number of successful extensions: 790
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)