Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_K09
         (664 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0578 + 4295386-4296489,4297394-4297507                          194   5e-50
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272...   190   9e-49
03_05_0366 - 23505755-23506441                                         35   0.066
10_02_0199 + 6668902-6669293,6669825-6669882                           34   0.12 
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239...    33   0.15 
06_03_0270 + 19009412-19009888,19009936-19011048,19011810-190118...    31   0.82 
06_01_0017 + 189346-189561,189614-189905,190024-190043                 30   1.4  
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130...    29   4.4  
04_01_0588 + 7657510-7657992,7658397-7658843                           29   4.4  
02_04_0457 + 23093020-23093343,23093798-23093806                       29   4.4  
03_01_0092 - 731069-731434,731569-733080                               28   7.6  

>07_01_0578 + 4295386-4296489,4297394-4297507
          Length = 405

 Score =  194 bits (473), Expect = 5e-50
 Identities = 91/160 (56%), Positives = 108/160 (67%)
 Frame = +3

Query: 180 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 359
           VF+AP+RPD+V  VH  +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR
Sbjct: 31  VFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHR 90

Query: 360 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 539
           +GQGAFGNMCRGGRMFAPTK WR+WH                          ARGH IE 
Sbjct: 91  AGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVLARGHRIET 150

Query: 540 IPELPLVVADKVXEINKTKQAVIFLRRLKAWSDILKVYKS 659
           +PELPLV++D    I KT QA+  L+++ A++D  K   S
Sbjct: 151 VPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDS 190


>03_06_0298 -
           32925441-32925998,32926371-32926730,32927161-32927230,
           32927642-32927797,32929181-32929242,32929339-32929352,
           32930421-32930520,32931474-32932574
          Length = 806

 Score =  190 bits (463), Expect = 9e-49
 Identities = 95/172 (55%), Positives = 111/172 (64%)
 Frame = +3

Query: 144 DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 323
           D AG Q  P   V +APIRPD+V   H  +S N RQPY VS+ AGHQTSAESWGTGRAV+
Sbjct: 21  DSAGIQ-MPQ--VLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAGHQTSAESWGTGRAVS 77

Query: 324 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXX 503
           RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH                      
Sbjct: 78  RIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVP 137

Query: 504 XXXQARGHIIEKIPELPLVVADKVXEINKTKQAVIFLRRLKAWSDILKVYKS 659
               ARGH IE +PE PLVV+D +  I KT Q++  L+++ A++D  K   S
Sbjct: 138 SLVLARGHRIEGVPEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDS 189


>03_05_0366 - 23505755-23506441
          Length = 228

 Score = 34.7 bits (76), Expect = 0.066
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
 Frame = +3

Query: 132 REERDGAGXQPSP---SRFVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAES 299
           R+ + G+G +  P     ++  AP   D   +V  S +   R  P C S E   + +AES
Sbjct: 90  RQRQGGSGWERHPWPHDSWIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAES 149

Query: 300 WGTGRAVARIPRVRGGGTHRSGQGA 374
             TG A  R  R+  G T+ + + A
Sbjct: 150 GATGLAHTRAGRIHAGPTNDNDEEA 174


>10_02_0199 + 6668902-6669293,6669825-6669882
          Length = 149

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = +3

Query: 291 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 401
           A+SW TGRA A + R R GG  R    A  N   G R
Sbjct: 36  AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72


>06_02_0298 +
           13921310-13921834,13921923-13922063,13923601-13923951,
           13924071-13924130,13924261-13924380,13924569-13924718
          Length = 448

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -1

Query: 397 PPRHMLPKAP*PDLWVPPP 341
           PPRH++P+ P P  WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325


>06_03_0270 +
           19009412-19009888,19009936-19011048,19011810-19011899,
           19011928-19012027,19012135-19012333,19012559-19012679
          Length = 699

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 30/116 (25%), Positives = 44/116 (37%)
 Frame = +3

Query: 81  SSEMSLSVARPLXVGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYC 260
           + +M+ S A    +G F  +RD     P  +R   K P    +  +  +  +++ R P  
Sbjct: 12  AGDMAPSSASDPTLG-FLTKRDTEVKLPRATRVKNKTPASVQITAEQILREARSGRSPRS 70

Query: 261 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWR 428
           V       T + S  T  A AR  R         G  A G+   GGR    T P R
Sbjct: 71  VPPSRRSPTPSSSPSTASAAARSSRTPSAAP--GGTSARGSSTPGGRSGRGTSPAR 124


>06_01_0017 + 189346-189561,189614-189905,190024-190043
          Length = 175

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -3

Query: 533 NNVSSSLNERWDAGSSNGCCQGR--SPLSEVDATVPAP 426
           N+ +S L+ +WDAGS +        SPLS V A   AP
Sbjct: 103 NDSTSKLSFKWDAGSCSSASSSAMYSPLSAVSAPAKAP 140


>08_02_1318 -
           26111031-26111276,26112139-26112427,26112936-26113036,
           26113628-26113878,26114842-26114865,26115793-26116129
          Length = 415

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 281 VTSLLAHAVRLPRVLGHRNVNIIDQVRTYGRLEHEXGGAWLXP 153
           +TS+  H  RL   L  R++  +  +R YG   HE G A+  P
Sbjct: 343 LTSVAGHYGRLDGDLVVRSLTFVSNMRAYGPFGHEDGVAFDLP 385


>04_01_0588 + 7657510-7657992,7658397-7658843
          Length = 309

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
 Frame = +3

Query: 213 NDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRV---RGGGTHRSGQGAFGN 383
           +D+    ++ SR    +   +  ++S+  W  G    R+  +    GGG  R      G 
Sbjct: 201 HDIQWGDNQPSRSSGVLPSSSEWRSSSSRWDLGEITRRMDTLDMQMGGGQQRRPPAEDGL 260

Query: 384 MCRGGRMFAPTKPWRRW 434
                    P  PWRRW
Sbjct: 261 GWASSWFGRPNLPWRRW 277


>02_04_0457 + 23093020-23093343,23093798-23093806
          Length = 110

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +3

Query: 276 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 380
           G + S   W  G A A    VRGGG  RSG G  G
Sbjct: 76  GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109


>03_01_0092 - 731069-731434,731569-733080
          Length = 625

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 394 PRHMLPKAP*PDLWVPPPRTRGIRATARPVP 302
           P H++P  P P L  P P+++      R  P
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAP 297


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,299,771
Number of Sequences: 37544
Number of extensions: 414475
Number of successful extensions: 1483
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)