Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_K05
         (669 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical pr...   176   1e-44
Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical pr...   171   5e-43
Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical p...   171   5e-43
Z81586-13|CAN86915.1|  563|Caenorhabditis elegans Hypothetical p...    29   2.3  
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am...    29   2.3  
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am...    29   2.3  

>Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical
           protein C06A1.1 protein.
          Length = 809

 Score =  176 bits (429), Expect = 1e-44
 Identities = 75/123 (60%), Positives = 97/123 (78%)
 Frame = +2

Query: 299 NEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 478
           NEK+RM             DVVSI P P++ YG R+H+LPIDD++EGLTGNLF+V+LKPY
Sbjct: 85  NEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGLTGNLFDVFLKPY 144

Query: 479 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 658
           F+EAYRP+H+ D F V+  MR VEFKVVET+P+P CIV+PDT+IH +G+PIKREEEEE++
Sbjct: 145 FLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIHYEGDPIKREEEEESM 204

Query: 659 NAV 667
           N +
Sbjct: 205 NDI 207



 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 38/59 (64%), Positives = 53/59 (89%)
 Frame = +1

Query: 121 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 297
           K +PNRLIV+++  DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE+V I++SD++CP
Sbjct: 26  KVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKESVAIIVSDESCP 84


>Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score =  171 bits (415), Expect = 5e-43
 Identities = 78/123 (63%), Positives = 96/123 (78%)
 Frame = +2

Query: 299 NEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 478
           N+KI+M             DVVSI+    ++YGKRVH+LPIDD++EGLTGNLF+V+L+PY
Sbjct: 85  NDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPY 143

Query: 479 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 658
           F +AYRP+H+ D F V+  MR VEFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEAL
Sbjct: 144 FTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEAL 203

Query: 659 NAV 667
           N V
Sbjct: 204 NEV 206



 Score = 90.6 bits (215), Expect = 9e-19
 Identities = 40/59 (67%), Positives = 53/59 (89%)
 Frame = +1

Query: 121 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 297
           K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+ETV IVL+ DNCP
Sbjct: 26  KKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCP 84


>Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score =  171 bits (415), Expect = 5e-43
 Identities = 78/123 (63%), Positives = 96/123 (78%)
 Frame = +2

Query: 299 NEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPY 478
           N+KI+M             DVVSI+    ++YGKRVH+LPIDD++EGLTGNLF+V+L+PY
Sbjct: 85  NDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPY 143

Query: 479 FMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEAL 658
           F +AYRP+H+ D F V+  MR VEFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEAL
Sbjct: 144 FTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEAL 203

Query: 659 NAV 667
           N V
Sbjct: 204 NEV 206



 Score = 90.6 bits (215), Expect = 9e-19
 Identities = 40/59 (67%), Positives = 53/59 (89%)
 Frame = +1

Query: 121 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCP 297
           K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+ETV IVL+ DNCP
Sbjct: 26  KKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCP 84


>Z81586-13|CAN86915.1|  563|Caenorhabditis elegans Hypothetical
           protein T05F1.1b protein.
          Length = 563

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -2

Query: 308 FSHSGQLSSESTMQTVSLRRLPLSKTVSPRKS 213
           F H+G+  SE+++    LRRL    ++SP+K+
Sbjct: 324 FMHAGKTPSENSVAAQLLRRLKYFSSISPKKN 355


>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
           amphipath transporters(subfamily iv p-type atpase)
           protein 4, isoform a protein.
          Length = 1212

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 562 DHFELDGAHAPPDHEGVVTMDR-TVSLHEVRLQVYFE 455
           D+ + D    PPD  GVVT ++   S++ +R +V FE
Sbjct: 222 DYSKKDSTFKPPDFTGVVTCEKPDKSIYTIRAKVEFE 258


>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
           amphipath transporters(subfamily iv p-type atpase)
           protein 4, isoform b protein.
          Length = 1454

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 562 DHFELDGAHAPPDHEGVVTMDR-TVSLHEVRLQVYFE 455
           D+ + D    PPD  GVVT ++   S++ +R +V FE
Sbjct: 222 DYSKKDSTFKPPDFTGVVTCEKPDKSIYTIRAKVEFE 258


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,535,167
Number of Sequences: 27780
Number of extensions: 327545
Number of successful extensions: 915
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)