Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_J24
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 179 2e-45
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 179 2e-45
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 179 2e-45
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 151 6e-37
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 151 6e-37
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 144 4e-35
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 144 4e-35
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 130 1e-30
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 130 1e-30
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 130 1e-30
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 100 2e-21
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 100 2e-21
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 68 7e-12
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 68 7e-12
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 68 7e-12
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 68 7e-12
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 68 7e-12
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 68 7e-12
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 67 1e-11
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 63 2e-10
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 62 3e-10
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 62 4e-10
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 60 1e-09
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 57 1e-08
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 55 4e-08
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 55 4e-08
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 55 4e-08
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 54 7e-08
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 52 4e-07
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 51 6e-07
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 51 6e-07
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 51 8e-07
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 50 1e-06
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 48 6e-06
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 47 1e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 46 2e-05
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 46 2e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 46 2e-05
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 45 4e-05
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 45 4e-05
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 45 4e-05
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 45 4e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 44 7e-05
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 44 7e-05
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 44 7e-05
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 44 1e-04
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 44 1e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 43 2e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 43 2e-04
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 41 7e-04
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 41 9e-04
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 41 9e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 40 0.002
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 39 0.003
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 39 0.003
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 39 0.004
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 39 0.004
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 39 0.004
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 38 0.006
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 38 0.006
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 38 0.006
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 38 0.006
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 38 0.006
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 38 0.008
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 38 0.008
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 38 0.008
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 37 0.011
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.033
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 35 0.044
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 35 0.044
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 35 0.044
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 35 0.044
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 35 0.058
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 35 0.058
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 35 0.058
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 35 0.058
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 34 0.077
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 34 0.077
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 34 0.077
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 34 0.077
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 34 0.077
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 32 0.41
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 31 0.94
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 30 1.2
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF100663-3|AAC68980.1| 529|Caenorhabditis elegans Udp-glucurono... 29 2.2
AF100663-2|AAC68981.2| 532|Caenorhabditis elegans Udp-glucurono... 29 2.2
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 29 2.9
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 28 5.0
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 28 5.0
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 27 8.8
AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical ... 27 8.8
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 179 bits (435), Expect = 2e-45
Identities = 82/168 (48%), Positives = 113/168 (67%), Gaps = 1/168 (0%)
Frame = +3
Query: 153 MRPQNGD-DGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRG 329
++ +NG D EPE RKIF+GGL TTD+ ++ + ++GEI D++VM+DP TKRSRG
Sbjct: 6 IKAENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRG 65
Query: 330 FGFITYSKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDH 509
FGF+T+S VD A RPH IDG+ V+ KRAV R D E+ + K+L++ G+++DH
Sbjct: 66 FGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDH 125
Query: 510 EEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKVCL 653
E+ L +YF+ YG V I+ DK T K RGFGFV FDD+D VD+ L
Sbjct: 126 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Score = 54.0 bits (124), Expect = 9e-08
Identities = 20/100 (20%), Positives = 52/100 (52%)
Frame = +3
Query: 159 PQNGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGF 338
P++ + E +++++ G+ T++ L +F K+G + ++ D T++ RGFGF
Sbjct: 100 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 159
Query: 339 ITYSKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPE 458
+T+ VD + H ++G + ++ +++ ++ +
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQ 199
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 179 bits (435), Expect = 2e-45
Identities = 82/168 (48%), Positives = 113/168 (67%), Gaps = 1/168 (0%)
Frame = +3
Query: 153 MRPQNGD-DGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRG 329
++ +NG D EPE RKIF+GGL TTD+ ++ + ++GEI D++VM+DP TKRSRG
Sbjct: 6 IKAENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRG 65
Query: 330 FGFITYSKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDH 509
FGF+T+S VD A RPH IDG+ V+ KRAV R D E+ + K+L++ G+++DH
Sbjct: 66 FGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDH 125
Query: 510 EEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKVCL 653
E+ L +YF+ YG V I+ DK T K RGFGFV FDD+D VD+ L
Sbjct: 126 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Score = 54.0 bits (124), Expect = 9e-08
Identities = 20/100 (20%), Positives = 52/100 (52%)
Frame = +3
Query: 159 PQNGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGF 338
P++ + E +++++ G+ T++ L +F K+G + ++ D T++ RGFGF
Sbjct: 100 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 159
Query: 339 ITYSKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPE 458
+T+ VD + H ++G + ++ +++ ++ +
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQ 199
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 179 bits (435), Expect = 2e-45
Identities = 82/168 (48%), Positives = 113/168 (67%), Gaps = 1/168 (0%)
Frame = +3
Query: 153 MRPQNGD-DGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRG 329
++ +NG D EPE RKIF+GGL TTD+ ++ + ++GEI D++VM+DP TKRSRG
Sbjct: 6 IKAENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRG 65
Query: 330 FGFITYSKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDH 509
FGF+T+S VD A RPH IDG+ V+ KRAV R D E+ + K+L++ G+++DH
Sbjct: 66 FGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDH 125
Query: 510 EEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKVCL 653
E+ L +YF+ YG V I+ DK T K RGFGFV FDD+D VD+ L
Sbjct: 126 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Score = 54.0 bits (124), Expect = 9e-08
Identities = 20/100 (20%), Positives = 52/100 (52%)
Frame = +3
Query: 159 PQNGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGF 338
P++ + E +++++ G+ T++ L +F K+G + ++ D T++ RGFGF
Sbjct: 100 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 159
Query: 339 ITYSKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPE 458
+T+ VD + H ++G + ++ +++ ++ +
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQ 199
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 151 bits (365), Expect = 6e-37
Identities = 66/135 (48%), Positives = 92/135 (68%)
Frame = +3
Query: 249 LKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNNRPHKIDGRFVETKRA 428
++ + ++GEI D++VM+DP TKRSRGFGF+T+S VD A RPH IDG+ V+ KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 429 VARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFG 608
V R D E+ + K+L++ G+++DH E+ L +YF+ YG V I+ DK T K RGFG
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 609 FVEFDDYDPVDKVCL 653
FV FDD+D VD+ L
Sbjct: 121 FVTFDDHDSVDQCVL 135
Score = 54.0 bits (124), Expect = 9e-08
Identities = 20/100 (20%), Positives = 52/100 (52%)
Frame = +3
Query: 159 PQNGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGF 338
P++ + E +++++ G+ T++ L +F K+G + ++ D T++ RGFGF
Sbjct: 62 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 121
Query: 339 ITYSKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPE 458
+T+ VD + H ++G + ++ +++ ++ +
Sbjct: 122 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQ 161
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 151 bits (365), Expect = 6e-37
Identities = 66/135 (48%), Positives = 92/135 (68%)
Frame = +3
Query: 249 LKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNNRPHKIDGRFVETKRA 428
++ + ++GEI D++VM+DP TKRSRGFGF+T+S VD A RPH IDG+ V+ KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 429 VARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFG 608
V R D E+ + K+L++ G+++DH E+ L +YF+ YG V I+ DK T K RGFG
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 609 FVEFDDYDPVDKVCL 653
FV FDD+D VD+ L
Sbjct: 121 FVTFDDHDSVDQCVL 135
Score = 54.0 bits (124), Expect = 9e-08
Identities = 20/100 (20%), Positives = 52/100 (52%)
Frame = +3
Query: 159 PQNGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGF 338
P++ + E +++++ G+ T++ L +F K+G + ++ D T++ RGFGF
Sbjct: 62 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 121
Query: 339 ITYSKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPE 458
+T+ VD + H ++G + ++ +++ ++ +
Sbjct: 122 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQ 161
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 144 bits (350), Expect = 4e-35
Identities = 68/162 (41%), Positives = 104/162 (64%)
Frame = +3
Query: 165 NGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFIT 344
+ DDG + K+FIGGL+++TT E+L+ +F ++GE+ + +VM+DP TKR+RGFGFIT
Sbjct: 33 DSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFIT 92
Query: 345 YSKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEEL 524
+ VD NNR H++DG+ ++ K A ++ + KK+FIGG+ E++
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVAFPKR--TQAKLVTKTKKVFIGGLSATSTLEDM 150
Query: 525 RQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKVC 650
+QYF YG V++ ++ DK T + RGFGFV FD + DKVC
Sbjct: 151 KQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/80 (37%), Positives = 51/80 (63%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQN 380
+K+FIGGL+ +T E +K +F +G++ D ++M D T+R RGFGF+T+ + D
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 381 NRPHKIDGRFVETKRAVARQ 440
H+I+G+ VE K+A ++
Sbjct: 194 IHFHEINGKMVECKKAQPKE 213
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 144 bits (350), Expect = 4e-35
Identities = 68/162 (41%), Positives = 104/162 (64%)
Frame = +3
Query: 165 NGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFIT 344
+ DDG + K+FIGGL+++TT E+L+ +F ++GE+ + +VM+DP TKR+RGFGFIT
Sbjct: 33 DSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFIT 92
Query: 345 YSKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEEL 524
+ VD NNR H++DG+ ++ K A ++ + KK+FIGG+ E++
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVAFPKR--TQAKLVTKTKKVFIGGLSATSTLEDM 150
Query: 525 RQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKVC 650
+QYF YG V++ ++ DK T + RGFGFV FD + DKVC
Sbjct: 151 KQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/80 (37%), Positives = 51/80 (63%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQN 380
+K+FIGGL+ +T E +K +F +G++ D ++M D T+R RGFGF+T+ + D
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 381 NRPHKIDGRFVETKRAVARQ 440
H+I+G+ VE K+A ++
Sbjct: 194 IHFHEINGKMVECKKAQPKE 213
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 130 bits (313), Expect = 1e-30
Identities = 67/170 (39%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Frame = +3
Query: 168 GDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITY 347
G ++ P RK+FIGGL++ TTDE L +F +WG +VD +V++DP TK SRGFGF+T+
Sbjct: 38 GQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 97
Query: 348 SKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKN---PEAGATVK----KLFIGGIKDD 506
+ + A N+RPHK+ G+ V++KRA+ R+ + + P T KL + GI +
Sbjct: 98 ASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNG 157
Query: 507 -HEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKVCL 653
H + LR YF +G + V I+ G+ RG GFV ++D + D+ CL
Sbjct: 158 VHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADR-CL 201
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 130 bits (313), Expect = 1e-30
Identities = 67/170 (39%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Frame = +3
Query: 168 GDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITY 347
G ++ P RK+FIGGL++ TTDE L +F +WG +VD +V++DP TK SRGFGF+T+
Sbjct: 58 GQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 117
Query: 348 SKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKN---PEAGATVK----KLFIGGIKDD 506
+ + A N+RPHK+ G+ V++KRA+ R+ + + P T KL + GI +
Sbjct: 118 ASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNG 177
Query: 507 -HEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKVCL 653
H + LR YF +G + V I+ G+ RG GFV ++D + D+ CL
Sbjct: 178 VHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADR-CL 221
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 130 bits (313), Expect = 1e-30
Identities = 67/170 (39%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Frame = +3
Query: 168 GDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITY 347
G ++ P RK+FIGGL++ TTDE L +F +WG +VD +V++DP TK SRGFGF+T+
Sbjct: 59 GQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 118
Query: 348 SKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKN---PEAGATVK----KLFIGGIKDD 506
+ + A N+RPHK+ G+ V++KRA+ R+ + + P T KL + GI +
Sbjct: 119 ASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNG 178
Query: 507 -HEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKVCL 653
H + LR YF +G + V I+ G+ RG GFV ++D + D+ CL
Sbjct: 179 VHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADR-CL 222
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 99.5 bits (237), Expect = 2e-21
Identities = 49/148 (33%), Positives = 81/148 (54%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQN 380
+KIF+GG++ + +E L +HF ++GE+ V D RSRGF F+ ++ A
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 381 NRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQN 560
R I G+ VE K A +R++ KK+F+GG+ D+ E++LR +F +G V +
Sbjct: 89 AREQTIKGKSVEVKPAKSREN----------KKVFVGGLPSDYSEQDLRSHFEQFGKVDD 138
Query: 561 VSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
+ DK T +R F F+ F++ + DK
Sbjct: 139 IEWPFDKQTKARRNFAFIVFEEEESADK 166
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/78 (29%), Positives = 43/78 (55%)
Frame = +3
Query: 198 HRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQ 377
++K+F+GGL +++ L++HF ++G++ D+ D +TK R F FI + + D A
Sbjct: 109 NKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKAS 168
Query: 378 NNRPHKIDGRFVETKRAV 431
+ R + K+AV
Sbjct: 169 SQTKQTFGTRECDVKKAV 186
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 99.5 bits (237), Expect = 2e-21
Identities = 49/148 (33%), Positives = 81/148 (54%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQN 380
+KIF+GG++ + +E L +HF ++GE+ V D RSRGF F+ ++ A
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 381 NRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQN 560
R I G+ VE K A +R++ KK+F+GG+ D+ E++LR +F +G V +
Sbjct: 89 AREQTIKGKSVEVKPAKSREN----------KKVFVGGLPSDYSEQDLRSHFEQFGKVDD 138
Query: 561 VSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
+ DK T +R F F+ F++ + DK
Sbjct: 139 IEWPFDKQTKARRNFAFIVFEEEESADK 166
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/78 (29%), Positives = 43/78 (55%)
Frame = +3
Query: 198 HRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQ 377
++K+F+GGL +++ L++HF ++G++ D+ D +TK R F FI + + D A
Sbjct: 109 NKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKAS 168
Query: 378 NNRPHKIDGRFVETKRAV 431
+ R + K+AV
Sbjct: 169 SQTKQTFGTRECDVKKAV 186
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 67.7 bits (158), Expect = 7e-12
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Frame = +3
Query: 186 EPEVHR-KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHM 362
EP+ K+F+G + + + + F K+G + +++D T+ S+G F+T+
Sbjct: 49 EPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKD 108
Query: 363 VDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSN 542
+AQ H I + +E + + E +KLFIG + H EE LR+ F+
Sbjct: 109 AIEAQGAL-HNI--KVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAK 164
Query: 543 YGNVQNVSIVTDKNTGKKRGFGFVEF 620
+G++++ S++ D++ GK RG FV F
Sbjct: 165 FGHIEDCSVLRDQD-GKSRGCAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 67.7 bits (158), Expect = 7e-12
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Frame = +3
Query: 186 EPEVHR-KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHM 362
EP+ K+F+G + + + + F K+G + +++D T+ S+G F+T+
Sbjct: 49 EPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKD 108
Query: 363 VDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSN 542
+AQ H I + +E + + E +KLFIG + H EE LR+ F+
Sbjct: 109 AIEAQGAL-HNI--KVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAK 164
Query: 543 YGNVQNVSIVTDKNTGKKRGFGFVEF 620
+G++++ S++ D++ GK RG FV F
Sbjct: 165 FGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 67.7 bits (158), Expect = 7e-12
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Frame = +3
Query: 186 EPEVHR-KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHM 362
EP+ K+F+G + + + + F K+G + +++D T+ S+G F+T+
Sbjct: 49 EPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKD 108
Query: 363 VDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSN 542
+AQ H I + +E + + E +KLFIG + H EE LR+ F+
Sbjct: 109 AIEAQGAL-HNI--KVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAK 164
Query: 543 YGNVQNVSIVTDKNTGKKRGFGFVEF 620
+G++++ S++ D++ GK RG FV F
Sbjct: 165 FGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 67.7 bits (158), Expect = 7e-12
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Frame = +3
Query: 186 EPEVHR-KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHM 362
EP+ K+F+G + + + + F K+G + +++D T+ S+G F+T+
Sbjct: 49 EPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKD 108
Query: 363 VDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSN 542
+AQ H I + +E + + E +KLFIG + H EE LR+ F+
Sbjct: 109 AIEAQGAL-HNI--KVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAK 164
Query: 543 YGNVQNVSIVTDKNTGKKRGFGFVEF 620
+G++++ S++ D++ GK RG FV F
Sbjct: 165 FGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 67.7 bits (158), Expect = 7e-12
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Frame = +3
Query: 186 EPEVHR-KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHM 362
EP+ K+F+G + + + + F K+G + +++D T+ S+G F+T+
Sbjct: 49 EPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKD 108
Query: 363 VDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSN 542
+AQ H I + +E + + E +KLFIG + H EE LR+ F+
Sbjct: 109 AIEAQGAL-HNI--KVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAK 164
Query: 543 YGNVQNVSIVTDKNTGKKRGFGFVEF 620
+G++++ S++ D++ GK RG FV F
Sbjct: 165 FGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 67.7 bits (158), Expect = 7e-12
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Frame = +3
Query: 186 EPEVHR-KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHM 362
EP+ K+F+G + + + + F K+G + +++D T+ S+G F+T+
Sbjct: 49 EPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKD 108
Query: 363 VDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSN 542
+AQ H I + +E + + E +KLFIG + H EE LR+ F+
Sbjct: 109 AIEAQGAL-HNI--KVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAK 164
Query: 543 YGNVQNVSIVTDKNTGKKRGFGFVEF 620
+G++++ S++ D++ GK RG FV F
Sbjct: 165 FGHIEDCSVLRDQD-GKSRGCAFVTF 189
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 66.9 bits (156), Expect = 1e-11
Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA-QNN 383
I++GGL+ K ++ L V+ G +V V + KD T +GFGF+ + D A +
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 384 RPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNV 563
K+ G+ ++ +A A + KN + GA + F+G + + +E+ L FS +G + V
Sbjct: 75 NMIKLYGKPIKVNKASAHE--KNMDVGANI---FVGNLDPEVDEKLLYDTFSAFGVILQV 129
Query: 564 -SIVTDKNTGKKRGFGFVEFDDYDPVD 641
I+ D ++G +GF F+ F ++ D
Sbjct: 130 PKIMRDVDSGTSKGFAFINFASFEASD 156
Score = 34.3 bits (75), Expect = 0.077
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 192 EVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVV-VMKDPKTKRSRGFGFITYSKAHMVD 368
+V IF+G L+ + ++ L F +G I+ V +M+D + S+GF FI ++ D
Sbjct: 97 DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASD 156
Query: 369 DA 374
A
Sbjct: 157 TA 158
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 66.9 bits (156), Expect = 1e-11
Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA-QNN 383
I++GGL+ K ++ L V+ G +V V + KD T +GFGF+ + D A +
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 384 RPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNV 563
K+ G+ ++ +A A + KN + GA + F+G + + +E+ L FS +G + V
Sbjct: 85 NMIKLYGKPIKVNKASAHE--KNMDVGANI---FVGNLDPEVDEKLLYDTFSAFGVILQV 139
Query: 564 -SIVTDKNTGKKRGFGFVEFDDYDPVD 641
I+ D ++G +GF F+ F ++ D
Sbjct: 140 PKIMRDVDSGTSKGFAFINFASFEASD 166
Score = 34.3 bits (75), Expect = 0.077
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 192 EVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVV-VMKDPKTKRSRGFGFITYSKAHMVD 368
+V IF+G L+ + ++ L F +G I+ V +M+D + S+GF FI ++ D
Sbjct: 107 DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASD 166
Query: 369 DA 374
A
Sbjct: 167 TA 168
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 62.9 bits (146), Expect = 2e-10
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Frame = +3
Query: 198 HRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQ 377
H +F+G L+ ++E LK+ F K+GE+ + V++D +T++S+G+GF+++ ++A
Sbjct: 134 HFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAI 193
Query: 378 NNRPHK-IDGRFVETKRAVARQDIKNPE----------AGATVKKLFIGGIKDDHEEEEL 524
K I R V T A + +N + A +++G I + +L
Sbjct: 194 AGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADL 253
Query: 525 RQYFSNYGNVQNVSI 569
R FS YG++ V I
Sbjct: 254 RDLFSTYGDIAEVRI 268
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 480 LFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEF 620
+F+G + D E L+ F+ +G V ++ D T K +G+GFV F
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSF 183
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSK 353
+++G ++ +TTD L+ F +G+I +V + KT+R + F+ Y K
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIF---KTQR---YAFVRYEK 281
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 62.5 bits (145), Expect = 3e-10
Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Frame = +3
Query: 186 EPEVHR-KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHM 362
EP+ K+F+G + + + + F K+G + +++D T+ S+G F+T+
Sbjct: 49 EPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKD 108
Query: 363 VDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSN 542
+AQ H I + +E + + E +KLFIG + H EE LR+ F+
Sbjct: 109 AIEAQGAL-HNI--KVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAK 164
Query: 543 YGNVQNVSIVTDKNTGKKRG 602
+G++++ S++ D++ GK RG
Sbjct: 165 FGHIEDCSVLRDQD-GKSRG 183
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEF 620
K+F+G I E + R+ F YG+V + +I+ DK+T +G FV F
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 61.7 bits (143), Expect = 4e-10
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Frame = +3
Query: 198 HRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQ 377
+ +F+ E L F K+GEI VVM D + K +GFGF+ ++ DA
Sbjct: 237 YTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGK-PKGFGFVAFAD----QDAA 291
Query: 378 NNRPHKIDGRFVE---TKRAVARQDIKNPEAGATVKK----------------LFIGGIK 500
K++ +E K +V R K+ + +K L++ I+
Sbjct: 292 GQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIE 351
Query: 501 DDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+D ++ LR +FS++G + + ++ D+N G+ +GFGFV F+
Sbjct: 352 EDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFE 391
Score = 57.2 bits (132), Expect = 1e-08
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNNR 386
IFI L+ ++S+ F +G I+ V D + S+G+GF+ + H A
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGN-SKGYGFVHFETEHSAQTAIE-- 203
Query: 387 PHKIDGRFVETKRAVA------RQDIKN-PEAGATVKKLFIGGIKDDHEEEELRQYFSNY 545
K++G + K+ Q +K E+G +F+ + ++E+L FS +
Sbjct: 204 --KVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKF 261
Query: 546 GNVQNVSIVTDKNTGKKRGFGFVEFDDYD 632
G + + ++TD GK +GFGFV F D D
Sbjct: 262 GEITSAVVMTDAQ-GKPKGFGFVAFADQD 289
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNNR 386
+++ + D+ L+ HF +G I VM D + RS+GFGF+ + K A +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 387 PHKIDG 404
K+ G
Sbjct: 404 NSKMIG 409
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 61.7 bits (143), Expect = 4e-10
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Frame = +3
Query: 198 HRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQ 377
+ +F+ E L F K+GEI VVM D + K +GFGF+ ++ DA
Sbjct: 237 YTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGK-PKGFGFVAFAD----QDAA 291
Query: 378 NNRPHKIDGRFVE---TKRAVARQDIKNPEAGATVKK----------------LFIGGIK 500
K++ +E K +V R K+ + +K L++ I+
Sbjct: 292 GQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIE 351
Query: 501 DDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+D ++ LR +FS++G + + ++ D+N G+ +GFGFV F+
Sbjct: 352 EDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFE 391
Score = 57.2 bits (132), Expect = 1e-08
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNNR 386
IFI L+ ++S+ F +G I+ V D + S+G+GF+ + H A
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGN-SKGYGFVHFETEHSAQTAIE-- 203
Query: 387 PHKIDGRFVETKRAVA------RQDIKN-PEAGATVKKLFIGGIKDDHEEEELRQYFSNY 545
K++G + K+ Q +K E+G +F+ + ++E+L FS +
Sbjct: 204 --KVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKF 261
Query: 546 GNVQNVSIVTDKNTGKKRGFGFVEFDDYD 632
G + + ++TD GK +GFGFV F D D
Sbjct: 262 GEITSAVVMTDAQ-GKPKGFGFVAFADQD 289
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNNR 386
+++ + D+ L+ HF +G I VM D + RS+GFGF+ + K A +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 387 PHKIDG 404
K+ G
Sbjct: 404 NSKMIG 409
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNN 383
KIF+GGL Y T+D++L +F ++G+I + VV+ D T++SRG+GF+T + A +
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 384 RPHKIDGR 407
IDGR
Sbjct: 96 PNPIIDGR 103
Score = 57.2 bits (132), Expect = 1e-08
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKVC 650
K+F+GG+ ++ L +YF +G+++ ++TD+NT K RG+GFV D ++ C
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERAC 93
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 59.3 bits (137), Expect = 2e-09
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNNR 386
+ + G+++KTTDE + +F G +V +K S+GFGF+ S +
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVV-FCEIKRKSDGNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 387 PHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYG-NVQNV 563
H IDGR + K D ++ + ++ ++F+G + D +E +LR+ F + +
Sbjct: 234 QHMIDGRRCDVK----VPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIET 289
Query: 564 SIVTDKNTGKK-RGFGFVEFDDYDPVDKV 647
++VTD K RGF FV + +++
Sbjct: 290 AVVTDVFIPKPFRGFAFVTLSSAEAAERI 318
Score = 29.9 bits (64), Expect = 1.6
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +3
Query: 165 NGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGE-IVDVVVMKDPKT-KRSRGFGF 338
+G D P + R IF+G L K + L+ F + ++ V+ D K RGF F
Sbjct: 248 DGRDKQGRPSISR-IFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAF 306
Query: 339 ITYSKAHMVDDAQNNRPHKIDGRFVETKRAVARQD 443
+T S A + + ++G V A R++
Sbjct: 307 VTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPREE 341
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Frame = +3
Query: 198 HRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA- 374
H +F+G L+ + ++ L+ F +G++ D V++D T +S+G+GF++Y K + A
Sbjct: 21 HFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 80
Query: 375 QNNRPHKIDGRFVETKRAVAR---------------QDIKNPEAGATVKKLFIGGIKDDH 509
+ + R + T A + +I N +G +++G I
Sbjct: 81 EQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNT-SVYVGNIA-SL 138
Query: 510 EEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
E+E+RQ F+++G + V I K +G+ FV+FD+ D K
Sbjct: 139 TEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAK 177
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Frame = +3
Query: 198 HRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA- 374
H +F+G L+ + ++ L+ F +G++ D V++D T +S+G+GF++Y K + A
Sbjct: 31 HFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 90
Query: 375 QNNRPHKIDGRFVETKRAVAR---------------QDIKNPEAGATVKKLFIGGIKDDH 509
+ + R + T A + +I N +G +++G I
Sbjct: 91 EQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNT-SVYVGNIA-SL 148
Query: 510 EEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
E+E+RQ F+++G + V I K +G+ FV+FD+ D K
Sbjct: 149 TEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAK 187
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Frame = +3
Query: 198 HRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA- 374
H +F+G L+ + ++ L+ F +G++ D V++D T +S+G+GF++Y K + A
Sbjct: 134 HFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 193
Query: 375 QNNRPHKIDGRFVETKRAVAR---------------QDIKNPEAGATVKKLFIGGIKDDH 509
+ + R + T A + +I N +G +++G I
Sbjct: 194 EQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNT-SVYVGNIA-SL 251
Query: 510 EEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
E+E+RQ F+++G + V I K +G+ FV+FD+ D K
Sbjct: 252 TEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAK 290
Score = 54.0 bits (124), Expect = 9e-08
Identities = 34/157 (21%), Positives = 72/157 (45%)
Frame = +3
Query: 174 DGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSK 353
+G +EP R +++G L+ T++ + T F + G + V+ D F + +
Sbjct: 40 NGSDEP---RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQ 96
Query: 354 AHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQY 533
A N R + R ++ AV ++ +F+G + + + ++LR+
Sbjct: 97 ASQALQTMNKR--LLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREA 154
Query: 534 FSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
F +G+V + ++ D NT K +G+GFV + + ++
Sbjct: 155 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAER 191
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Frame = +3
Query: 198 HRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA- 374
H +F+G L+ + ++ L+ F +G++ D V++D T +S+G+GF++Y K + A
Sbjct: 102 HFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 161
Query: 375 QNNRPHKIDGRFVETKRAVAR---------------QDIKNPEAGATVKKLFIGGIKDDH 509
+ + R + T A + +I N +G +++G I
Sbjct: 162 EQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNT-SVYVGNIA-SL 219
Query: 510 EEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
E+E+RQ F+++G + V I K +G+ FV+FD+ D K
Sbjct: 220 TEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAK 258
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 56.8 bits (131), Expect = 1e-08
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITY----SKAHMVDD 371
K+F+G + ++ L+ F ++G+I + ++KD T +G F+TY S
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 372 AQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGN 551
+ + R ++ K A +P+ KKLFIG + E+E+R F+ +G
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 552 VQNVSIVTDKNTGKKRGFGFVEF 620
+ V+++ + G +G FV++
Sbjct: 150 LDEVTVLRGAD-GASKGCAFVKY 171
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYS---KAHMVDD 371
+K+FIG L+ + +++ ++ F +GE+ +V V++ S+G F+ Y AHM
Sbjct: 124 KKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG-ADGASKGCAFVKYKHGLDAHMAIS 182
Query: 372 A 374
A
Sbjct: 183 A 183
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 56.8 bits (131), Expect = 1e-08
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITY----SKAHMVDD 371
K+F+G + ++ L+ F ++G+I + ++KD T +G F+TY S
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 372 AQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGN 551
+ + R ++ K A +P+ KKLFIG + E+E+R F+ +G
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 552 VQNVSIVTDKNTGKKRGFGFVEF 620
+ V+++ + G +G FV++
Sbjct: 150 LDEVTVLRGAD-GASKGCAFVKY 171
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYS---KAHMVDD 371
+K+FIG L+ + +++ ++ F +GE+ +V V++ S+G F+ Y AHM
Sbjct: 124 KKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG-ADGASKGCAFVKYKHGLDAHMAIS 182
Query: 372 A 374
A
Sbjct: 183 A 183
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 55.6 bits (128), Expect = 3e-08
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +3
Query: 474 KKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
+ +F+G I D E+ +R FS GNV ++ +V D+ TGK +G+GF+EF D
Sbjct: 18 RSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPD 68
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 55.2 bits (127), Expect = 4e-08
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNNR 386
IFI L+ ++S+ F +G I+ V D + S+G+GF+ + ++A N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFE----TEEAAQNA 176
Query: 387 PHKIDGRFVETKRAVARQ----DIKNPEAGATVKK---LFIGGIKDDHEEEELRQYFSNY 545
K++G + K+ + +N E G T K+ +++ D + +E L + F+ +
Sbjct: 177 IQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKF 236
Query: 546 GNVQNVSIVTDKNTGKKRGFGFVEF 620
GN+ + ++T + GK +GFGFV F
Sbjct: 237 GNITSCEVMTVE--GKSKGFGFVAF 259
Score = 52.0 bits (119), Expect = 4e-07
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Frame = +3
Query: 156 RPQNGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFG 335
R Q + E + +++ E+L+ F K+G I VM +S+GFG
Sbjct: 198 RAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMT--VEGKSKGFG 255
Query: 336 FITYSKAHMVDDA-QNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKK----------- 479
F+ ++ + A Q I+G + K V R K E A +KK
Sbjct: 256 FVAFANPEEAETAVQALHDSTIEG--TDLKLHVCRAQ-KKSERHAELKKKHEQHKAERMQ 312
Query: 480 ------LFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
L++ + + +++ L++ F +YGN+ + ++TD+N G+ +GFGFV F+
Sbjct: 313 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFE 365
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSK 353
+++ L+ D+ LK F +G I VM D + RS+GFGF+ + K
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 366
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 55.2 bits (127), Expect = 4e-08
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNNR 386
IFI L+ ++S+ F +G I+ V D + S+G+GF+ + ++A N
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFE----TEEAAQNA 113
Query: 387 PHKIDGRFVETKRAVARQ----DIKNPEAGATVKK---LFIGGIKDDHEEEELRQYFSNY 545
K++G + K+ + +N E G T K+ +++ D + +E L + F+ +
Sbjct: 114 IQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKF 173
Query: 546 GNVQNVSIVTDKNTGKKRGFGFVEF 620
GN+ + ++T + GK +GFGFV F
Sbjct: 174 GNITSCEVMTVE--GKSKGFGFVAF 196
Score = 52.0 bits (119), Expect = 4e-07
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Frame = +3
Query: 156 RPQNGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFG 335
R Q + E + +++ E+L+ F K+G I VM +S+GFG
Sbjct: 135 RAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFG 192
Query: 336 FITYSKAHMVDDA-QNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKK----------- 479
F+ ++ + A Q I+G + K V R K E A +KK
Sbjct: 193 FVAFANPEEAETAVQALHDSTIEG--TDLKLHVCRAQ-KKSERHAELKKKHEQHKAERMQ 249
Query: 480 ------LFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
L++ + + +++ L++ F +YGN+ + ++TD+N G+ +GFGFV F+
Sbjct: 250 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFE 302
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSK 353
+++ L+ D+ LK F +G I VM D + RS+GFGF+ + K
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 303
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 55.2 bits (127), Expect = 4e-08
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNNR 386
IFI L+ ++S+ F +G I+ V D + S+G+GF+ + ++A N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFE----TEEAAQNA 176
Query: 387 PHKIDGRFVETKRAVARQ----DIKNPEAGATVKK---LFIGGIKDDHEEEELRQYFSNY 545
K++G + K+ + +N E G T K+ +++ D + +E L + F+ +
Sbjct: 177 IQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKF 236
Query: 546 GNVQNVSIVTDKNTGKKRGFGFVEF 620
GN+ + ++T + GK +GFGFV F
Sbjct: 237 GNITSCEVMTVE--GKSKGFGFVAF 259
Score = 52.0 bits (119), Expect = 4e-07
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Frame = +3
Query: 156 RPQNGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFG 335
R Q + E + +++ E+L+ F K+G I VM +S+GFG
Sbjct: 198 RAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFG 255
Query: 336 FITYSKAHMVDDA-QNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKK----------- 479
F+ ++ + A Q I+G + K V R K E A +KK
Sbjct: 256 FVAFANPEEAETAVQALHDSTIEG--TDLKLHVCRAQ-KKSERHAELKKKHEQHKAERMQ 312
Query: 480 ------LFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
L++ + + +++ L++ F +YGN+ + ++TD+N G+ +GFGFV F+
Sbjct: 313 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFE 365
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSK 353
+++ L+ D+ LK F +G I VM D + RS+GFGF+ + K
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 366
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 54.4 bits (125), Expect = 7e-08
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
Frame = +3
Query: 192 EVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDD 371
E + I L T E +++ F GEI +++D T +S G+GF+ Y + +D
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVRE---ED 95
Query: 372 AQNNRPHKIDGRFVETKRA-VARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYG 548
A +G ++ K V+ N + + L++ GI EL F +G
Sbjct: 96 ALR-AVSSFNGLRLQNKTIKVSYARPSNDQIKGS--NLYVSGIPKSMTLHELESIFRPFG 152
Query: 549 NVQNVSIVTDKNTGKKRGFGFVEFDDYDPVD 641
+ I++D TG +G GFV FD D D
Sbjct: 153 QIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +3
Query: 450 NPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEF 620
N + G + L I + +EE+R F++ G +++ +V DK TG+ G+GFV +
Sbjct: 34 NVDIGESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNY 90
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA 374
+++ G+ T L++ F +G+I+ ++ D T S+G GF+ + K D A
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVA 185
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +3
Query: 480 LFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
+++G E++L YFS GNV NV IV D+ TG+ RGF FVEF +
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTE 54
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/49 (28%), Positives = 32/49 (65%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSK 353
+++G ++TT++ L +F + G + +V ++ D +T R RGF F+ +++
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTE 54
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +3
Query: 480 LFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
+++G + EEE+ YF+ G+V NV IV D+ TG+ RGF FVEF +
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSE 56
Score = 40.7 bits (91), Expect = 9e-04
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSK 353
+++G + Y+ T+E + +F G + +V ++ D +T R RGF F+ +S+
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSE 56
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 52.0 bits (119), Expect = 4e-07
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Frame = +3
Query: 156 RPQNGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFG 335
R Q + E + +++ E+L+ F K+G I VM +S+GFG
Sbjct: 138 RAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFG 195
Query: 336 FITYSKAHMVDDA-QNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKK----------- 479
F+ ++ + A Q I+G + K V R K E A +KK
Sbjct: 196 FVAFANPEEAETAVQALHDSTIEG--TDLKLHVCRAQ-KKSERHAELKKKHEQHKAERMQ 252
Query: 480 ------LFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
L++ + + +++ L++ F +YGN+ + ++TD+N G+ +GFGFV F+
Sbjct: 253 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFE 305
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSK 353
+++ L+ D+ LK F +G I VM D + RS+GFGF+ + K
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 306
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 480 LFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEF 620
+++G EEEL +FS+ G + NV IV D+ TG+ RGF F+EF
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEF 53
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSK 353
+++G ++TT+E L F G+I +V ++ D +T R RGF FI +++
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAE 55
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 51.2 bits (117), Expect = 6e-07
Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Frame = +3
Query: 168 GDDGYEEPEVH--RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFI 341
G D P+++ + I L+Y+TT L+ F ++G+I DV + +D +++S+GFGF+
Sbjct: 6 GGDRRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFV 65
Query: 342 TYSKAHMVDDAQNNRPHK-IDGRFVETKRAVARQDIKNPEAG 464
+ + + A + K +DGR E + +A+ D + E G
Sbjct: 66 RFYERRDAEHALDRTDGKLVDGR--ELRVTLAKYDRPSDERG 105
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 519 ELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEF 620
+LR+ F YG++ +V I DK + + +GFGFV F
Sbjct: 34 DLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 51.2 bits (117), Expect = 6e-07
Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Frame = +3
Query: 168 GDDGYEEPEVH--RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFI 341
G D P+++ + I L+Y+TT L+ F ++G+I DV + +D +++S+GFGF+
Sbjct: 6 GGDRRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFV 65
Query: 342 TYSKAHMVDDAQNNRPHK-IDGRFVETKRAVARQDIKNPEAG 464
+ + + A + K +DGR E + +A+ D + E G
Sbjct: 66 RFYERRDAEHALDRTDGKLVDGR--ELRVTLAKYDRPSDERG 105
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 519 ELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEF 620
+LR+ F YG++ +V I DK + + +GFGFV F
Sbjct: 34 DLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 50.8 bits (116), Expect = 8e-07
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNN 383
+I++G + +++L F K G+I D+ +M DP + SRG+ F+TY + D A
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTY--CNKEDAAAAA 258
Query: 384 RPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGI-KDDHEEEELRQYFSNYGNVQN 560
+ + DG + T + + N T +LFIG I K ++E L + ++ V +
Sbjct: 259 KTY--DGHEISTGKPLK----VNVSIANT--RLFIGNIPKTKSKDEILEELKTHAEGVVD 310
Query: 561 VSI--VTDKNTGKKRGFGFVEFDDY 629
V + V D K RGF FV+F D+
Sbjct: 311 VIVYSVPDNEKIKNRGFCFVDFIDH 335
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical protein
T23F6.4 protein.
Length = 872
Score = 50.4 bits (115), Expect = 1e-06
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Frame = +3
Query: 183 EEPEVHRKIFIGGLNYKTTDESLKTHFVK-WGEIVDVVVMK------DPKTKRSRGFGFI 341
+E E +F+ L + TTD SL+ F K +G++V + +P S GFGF+
Sbjct: 635 KEIESGSTLFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFV 694
Query: 342 TYSKAHMVDDA-QNNRPHKIDGRFVETK---------RAVARQDIKNPEAGATVKKLFIG 491
+ A A ++ + +DG +E K A+ R+++K E G K L +
Sbjct: 695 QFYTAFDAKTALKDMQGELLDGHSLELKISHRENADKGALKRKEVKQKEQGECTK-LLVR 753
Query: 492 GIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKK---RGFGFVEFDDYD 632
+ + +E+ F +G V+ + I K G+K RGFGFV+F D
Sbjct: 754 NLPFEASVKEVETLFETFGAVKTIRI--PKKPGQKQQHRGFGFVDFISAD 801
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEF 620
+LF+ + +E++L+ F YG V V +V DK TG +GF VEF
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEF 327
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITY 347
++F+ L Y T ++ L+ F K+GE+ +V V+ D KT +GF + +
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEF 327
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3
Query: 474 KKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+ L++GG +D E+ L F +G+V +SI D +GK RGFGFVEFD
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKA 356
R +++GG T++ L F+ +G++V + + D ++ + RGFGF+ + A
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMA 62
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +3
Query: 480 LFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
++IGG+ E ++ FS YG V N++++ DK+TGK +GF F+ + D
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKD 88
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/47 (34%), Positives = 33/47 (70%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITY 347
I+IGGL+Y ++ + F ++GE++++ +++D T +S+GF F+ Y
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCY 86
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 48.0 bits (109), Expect = 6e-06
Identities = 36/169 (21%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Frame = +3
Query: 159 PQNGDDGYEEPEV--HRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGF 332
P+ + +PE H +F+G L + L+ FVK+GE+ + +++D T + +G+
Sbjct: 116 PREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGY 175
Query: 333 GFITYSKAHMVDDAQNNRPHK-IDGRFVETKRAVARQDIKNPEAG-ATVKKLFIGGIKDD 506
GF++Y + + A + + R + T A + D G ++ GG +D
Sbjct: 176 GFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDEDGERGGDRGDRRGGGGGGRDR 235
Query: 507 HEEEELRQY--FSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKV 647
+ + + Y N N S+ FD + P+++V
Sbjct: 236 YHNQSEKTYDEIFNQAAADNTSVYVGNIANLGEDEIRRAFDRFGPINEV 284
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +3
Query: 447 KNPEAGAT-VKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+NP A + LF+G I + E +LR+ F YG ++ +++V D+ GK RG+ F+E+
Sbjct: 94 ENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDE-AGKPRGYAFIEYS 152
Query: 624 D 626
D
Sbjct: 153 D 153
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +3
Query: 159 PQNGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGF 338
P E+P +R +F+G +NY+T++ L+ F +G+I + ++ D + + RG+ F
Sbjct: 92 PAENPRASEDP--YRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAF 148
Query: 339 ITYS-KAHMVDDAQNNRPHKIDGR 407
I YS KA M + K+DG+
Sbjct: 149 IEYSDKAEMHTAYKKADGIKVDGK 172
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/71 (29%), Positives = 40/71 (56%)
Frame = +3
Query: 195 VHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA 374
+ +IF+GG TT+ L+ HF K+ + DV ++K +S+G+GFIT+ ++
Sbjct: 64 IPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKS-LDGQSKGYGFITFETEDQAEEI 122
Query: 375 QNNRPHKIDGR 407
+ P +++ R
Sbjct: 123 RKLTPKQLEFR 133
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/57 (29%), Positives = 35/57 (61%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKV 647
++F+GG E ELR++F + V++V +V + G+ +G+GF+ F+ D +++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI 122
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 46.0 bits (104), Expect = 2e-05
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA 374
+ +FIG +++ +T E ++ HF G+IV + KD TK+ + F +I + + +++A
Sbjct: 55 KSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +3
Query: 474 KKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVD 641
K +FIG + + EE+ ++F G + +I DK T K++ F ++EFDD ++
Sbjct: 55 KSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIE 110
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/71 (29%), Positives = 40/71 (56%)
Frame = +3
Query: 195 VHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA 374
+ +IF+GG TT+ L+ HF K+ + DV ++K +S+G+GFIT+ ++
Sbjct: 65 IPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKS-LDGQSKGYGFITFETEDQAEEI 123
Query: 375 QNNRPHKIDGR 407
+ P +++ R
Sbjct: 124 RKLTPKQLEFR 134
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/57 (29%), Positives = 35/57 (61%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKV 647
++F+GG E ELR++F + V++V +V + G+ +G+GF+ F+ D +++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI 123
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 438 QDIKNPE--AGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGF 611
Q + PE A A K +++G + EE+ Q+F G+V V+I D+ +G +GF +
Sbjct: 64 QSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAY 123
Query: 612 VEFDD 626
VEF +
Sbjct: 124 VEFTE 128
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/72 (19%), Positives = 36/72 (50%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQN 380
+ +++G ++Y T E ++ HF G + V + D + +GF ++ +++ + +A
Sbjct: 78 KSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALA 137
Query: 381 NRPHKIDGRFVE 416
+ GR ++
Sbjct: 138 MTDSLLRGRQIK 149
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 45.2 bits (102), Expect = 4e-05
Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 2/143 (1%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQN 380
R IF+ L++ TT++ ++ I K RGF ++ A
Sbjct: 593 RTIFVSNLDFTTTEDEIRQAIEGVASI--RFARKANSDLVHRGFAYVVMENDQKAQQALL 650
Query: 381 NRPHKIDGR--FVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNV 554
+ GR F+ R K K+F+ + ++EL+ FS +G V
Sbjct: 651 KDRVPVKGRPMFISANDPEKRVGFKF-STTLEKSKVFVRNVHFQATDDELKALFSKFGTV 709
Query: 555 QNVSIVTDKNTGKKRGFGFVEFD 623
+V VT K+ GK +G FV+FD
Sbjct: 710 TSVRRVTHKD-GKPKGIAFVDFD 731
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/155 (19%), Positives = 65/155 (41%), Gaps = 14/155 (9%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITY---SKAHMVDDA 374
+I++G ++++ ++ L+ F +G I + + DP T + F F+ Y A + ++
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 375 QN-----NRPHKIDGRFVETKRAVARQDIKNPEAGATVK------KLFIGGIKDDHEEEE 521
N R K++ + R P K ++++ + D E +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 522 LRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
L+ F +G + + RGFG++EF++
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/56 (26%), Positives = 35/56 (62%)
Frame = +3
Query: 456 EAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+A + + ++++G I + E+ LR+ F +G ++++++ D TG + F FVE++
Sbjct: 96 QALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/155 (19%), Positives = 65/155 (41%), Gaps = 14/155 (9%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITY---SKAHMVDDA 374
+I++G ++++ ++ L+ F +G I + + DP T + F F+ Y A + ++
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 375 QN-----NRPHKIDGRFVETKRAVARQDIKNPEAGATVK------KLFIGGIKDDHEEEE 521
N R K++ + R P K ++++ + D E +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 522 LRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
L+ F +G + + RGFG++EF++
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/56 (26%), Positives = 35/56 (62%)
Frame = +3
Query: 456 EAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+A + + ++++G I + E+ LR+ F +G ++++++ D TG + F FVE++
Sbjct: 96 QALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/155 (19%), Positives = 65/155 (41%), Gaps = 14/155 (9%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITY---SKAHMVDDA 374
+I++G ++++ ++ L+ F +G I + + DP T + F F+ Y A + ++
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 375 QN-----NRPHKIDGRFVETKRAVARQDIKNPEAGATVK------KLFIGGIKDDHEEEE 521
N R K++ + R P K ++++ + D E +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 522 LRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
L+ F +G + + RGFG++EF++
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/56 (26%), Positives = 35/56 (62%)
Frame = +3
Query: 456 EAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+A + + ++++G I + E+ LR+ F +G ++++++ D TG + F FVE++
Sbjct: 96 QALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 189 PEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVD 368
P+ +++ + + ++ D LKT F K+G + DV ++ + + S+GFGF+T + +
Sbjct: 149 PDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFN--ERGSKGFGFVTMERPQDAE 206
Query: 369 DA-QNNRPHKIDGRFVETKRAVAR 437
A Q I+GR +E A AR
Sbjct: 207 RARQELHGSMIEGRKIEVNCATAR 230
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 44.4 bits (100), Expect = 7e-05
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA 374
+ +FIG +++ +T E ++ HF G IV + KD TK+ + F +I + + +++A
Sbjct: 61 KSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENA 118
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 189 PEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVD 368
P+ +++ + + ++ D LKT F K+G + DV ++ + + S+GFGF+T + +
Sbjct: 149 PDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFN--ERGSKGFGFVTMERPQDAE 206
Query: 369 DA-QNNRPHKIDGRFVETKRAVAR 437
A Q I+GR +E A AR
Sbjct: 207 RARQELHGSMIEGRKIEVNCATAR 230
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNNR 386
+++ + + T L+ +F ++G I V + DP T RGF IT+ + A R
Sbjct: 27 VYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQR 86
Query: 387 PHKIDGRFVETK 422
PH IDG V+ +
Sbjct: 87 PHVIDGDRVDVE 98
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +3
Query: 468 TVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
T + +++ +K + +L YF YG++Q+V++ D +TG RGF + FD D +K
Sbjct: 23 TGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANK 81
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +3
Query: 480 LFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
L+I G+ + ++ LR+ S YGN+ + + DK T +G+GFV+F+
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFE 156
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/147 (21%), Positives = 62/147 (42%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNNR 386
++I GL T D+ L+ K+G I + D T +G+GF+ + A +
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDG- 167
Query: 387 PHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVS 566
++ V+ + A +Q ++P L+I + D E+ L + +G V +
Sbjct: 168 ---LNTEGVQAQMAKLQQQEQDP------TNLYIANLPLDFTEQMLETELNKFGMVISTR 218
Query: 567 IVTDKNTGKKRGFGFVEFDDYDPVDKV 647
I+ + + RG GF D + + +
Sbjct: 219 ILRTPD-NQSRGVGFARMDSKEKCEVI 244
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 43.6 bits (98), Expect = 1e-04
Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 2/162 (1%)
Frame = +3
Query: 168 GDDGYEE--PEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFI 341
GD + + P ++I GL T D+ L+ K+G I + D T +G+GF+
Sbjct: 68 GDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFV 127
Query: 342 TYSKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEE 521
+ A + ++ V+ + A +Q ++P L+I + D E+
Sbjct: 128 DFESPQAAAAAVDG----LNTEGVQAQMAKLQQQEQDP------TNLYIANLPLDFTEQM 177
Query: 522 LRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKV 647
L + +G V + I+ + + RG GF D + + +
Sbjct: 178 LETELNKFGMVISTRILRTPD-NQSRGVGFARMDSKEKCEVI 218
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 474 KKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPV 638
+ L I I D +L ++FS G V++V I+TD TG+ +G +VEF D + V
Sbjct: 25 RTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 474 KKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPV 638
+ L I I D +L ++FS G V++V I+TD TG+ +G +VEF D + V
Sbjct: 170 RTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 453 PEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDY- 629
P G+ +K+++G + D E+E+ F YG ++ V I +G+ F FVEF+D+
Sbjct: 2 PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI----KSGRGPAFAFVEFEDHR 57
Query: 630 DPVDKV 647
D D V
Sbjct: 58 DAEDAV 63
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 453 PEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDY- 629
P G+ +K+++G + D E+E+ F YG ++ V I +G+ F FVEF+D+
Sbjct: 2 PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI----KSGRGPAFAFVEFEDHR 57
Query: 630 DPVDKV 647
D D V
Sbjct: 58 DAEDAV 63
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +3
Query: 336 FITYSKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEE 515
++ + V+ A K+D + + + K E G + +F+G + + E
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGS----KKKEFGKDMA-IFVGNLPFEITE 259
Query: 516 EELRQYFS-NYGNVQNVSIVTDKNTGKKRGFGFVEF 620
+ L +FS G V+ V IV DK+TGK +GF FV F
Sbjct: 260 DALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNF 295
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.1 bits (92), Expect = 7e-04
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +3
Query: 480 LFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+F+ I ++ E+++ FS YG ++N+ + D+ TG +G+ VE++
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYE 104
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +3
Query: 441 DIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEF 620
D+K+ + LF+ + +E+L FS +G + N IV D+ +G + F+EF
Sbjct: 230 DLKDADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
Query: 621 DD 626
D+
Sbjct: 290 DN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +3
Query: 441 DIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEF 620
D+K+ + LF+ + +E+L FS +G + N IV D+ +G + F+EF
Sbjct: 230 DLKDADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
Query: 621 DD 626
D+
Sbjct: 290 DN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +3
Query: 441 DIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEF 620
D+K+ + LF+ + +E+L FS +G + N IV D+ +G + F+EF
Sbjct: 161 DLKDADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 220
Query: 621 DD 626
D+
Sbjct: 221 DN 222
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 40.7 bits (91), Expect = 9e-04
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMV 365
R +++G +++K+T ++ HF G++ V + KD T + F F+ + K V
Sbjct: 46 RSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESV 100
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 474 KKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPV 638
+ +++G + E+ ++F+ G V V+I DK TG ++ F FVEF + V
Sbjct: 46 RSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESV 100
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +3
Query: 441 DIKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEF 620
D +NP+ K L + + E++LR F +G + +V D+ +G RGFGF+ F
Sbjct: 68 DRENPQPS---KCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
Query: 621 D 623
+
Sbjct: 125 N 125
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = +3
Query: 156 RPQNGDDGYEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFG 335
R +N E P+ + + + L+ TT++ L+ F ++GEI ++ D + SRGFG
Sbjct: 61 RGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFG 120
Query: 336 FITYSKAHMVDDA 374
FI + ++++DA
Sbjct: 121 FIYF---NLIEDA 130
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 486 IGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYD 632
+ + + E+ELR F G V + I DK TG +GF FV F+ D
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRD 228
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +3
Query: 213 IGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITY 347
+ L + ++ L+ F K G ++ + + +D T +GF F+T+
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 224
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 459 AGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPV 638
A T ++++ I E++L F YG V +V IVT N +GFGFV D +
Sbjct: 46 ASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESC 103
Query: 639 DK 644
+K
Sbjct: 104 EK 105
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 459 AGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPV 638
A T ++++ I E++L F YG V +V IVT N +GFGFV D +
Sbjct: 46 ASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESC 103
Query: 639 DK 644
+K
Sbjct: 104 EK 105
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +3
Query: 444 IKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+K + AT + LF+G + D +E E+R F +G V+ V I T NT + FV F
Sbjct: 160 LKQDDDEAT-RTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQ 216
Query: 624 DYD 632
D
Sbjct: 217 TVD 219
Score = 34.7 bits (76), Expect = 0.058
Identities = 26/128 (20%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Frame = +3
Query: 183 EEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFG-FITYSKAH 359
++ E R +F+G + + ++ F + G++ +V + T + F F T +A
Sbjct: 163 DDDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAI 222
Query: 360 MVDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFS 539
+ +RP + G K + + ++LF+GG+ ++E L++ F
Sbjct: 223 QAKAEEQDRPIRAGGS--RMKIGYGKSQVS--------RRLFVGGLGSWCDKEILQKAFG 272
Query: 540 NYGNVQNV 563
+G V+N+
Sbjct: 273 EFGFVENI 280
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +3
Query: 444 IKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+K + AT + LF+G + D +E E+R F +G V+ V I T NT + FV F
Sbjct: 160 LKQDDDEAT-RTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQ 216
Query: 624 DYD 632
D
Sbjct: 217 TVD 219
Score = 34.7 bits (76), Expect = 0.058
Identities = 26/128 (20%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Frame = +3
Query: 183 EEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFG-FITYSKAH 359
++ E R +F+G + + ++ F + G++ +V + T + F F T +A
Sbjct: 163 DDDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAI 222
Query: 360 MVDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFS 539
+ +RP + G K + + ++LF+GG+ ++E L++ F
Sbjct: 223 QAKAEEQDRPIRAGGS--RMKIGYGKSQVS--------RRLFVGGLGSWCDKEILQKAFG 272
Query: 540 NYGNVQNV 563
+G V+N+
Sbjct: 273 EFGFVENI 280
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +3
Query: 444 IKNPEAGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+K + AT + LF+G + D +E E+R F +G V+ V I T NT + FV F
Sbjct: 137 LKQDDDEAT-RTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQ 193
Query: 624 DYD 632
D
Sbjct: 194 TVD 196
Score = 34.7 bits (76), Expect = 0.058
Identities = 26/128 (20%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Frame = +3
Query: 183 EEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFG-FITYSKAH 359
++ E R +F+G + + ++ F + G++ +V + T + F F T +A
Sbjct: 140 DDDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAI 199
Query: 360 MVDDAQNNRPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHEEEELRQYFS 539
+ +RP + G K + + ++LF+GG+ ++E L++ F
Sbjct: 200 QAKAEEQDRPIRAGGS--RMKIGYGKSQVS--------RRLFVGGLGSWCDKEILQKAFG 249
Query: 540 NYGNVQNV 563
+G V+N+
Sbjct: 250 EFGFVENI 257
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +3
Query: 471 VKKLFIGGIKD---DHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
+KK+++ IK E+EL YF +GNV + + ++ TG +G+ +V FD+
Sbjct: 28 LKKIYVVKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDN 82
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQN 380
R++ + + +K + L F K G +VDV ++ + + S+GFGF+T D A+
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARA 157
Query: 381 N-RPHKIDGRFVETKRAVAR 437
I+GR VE A R
Sbjct: 158 EFNGTTIEGRRVEVNLATQR 177
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 474 KKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
++L + I + E +L F G V +V I+ ++ K GFGFV + D D+
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSK--GFGFVTMQNPDDADR 154
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
K+++GG+ D +EL + F +G ++ V + + GF FVE+DD
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDD 48
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
K+++GG+ D +EL + F +G ++ V + + GF FVE+DD
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDD 48
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
K+++GG+ D +EL + F +G ++ V + + GF FVE+DD
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDD 48
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQN 380
R++ + + +K + L F K G +VDV ++ + + S+GFGF+T D A+
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARA 157
Query: 381 N-RPHKIDGRFVETKRAVAR 437
I+GR VE A R
Sbjct: 158 EFNGTTIEGRRVEVNLATQR 177
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 474 KKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
++L + I + E +L F G V +V I+ ++ K GFGFV + D D+
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSK--GFGFVTMQNPDDADR 154
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 480 LFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYD 632
+F+G I D +E +R+ + GNV + + N GK +GFGF F D +
Sbjct: 49 VFVGNISDKCSDEFIRKILNECGNVASWKRIKGSN-GKLQGFGFCHFTDLE 98
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 480 LFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYD 632
+F+G I D +E +R+ + GNV + + N GK +GFGF F D +
Sbjct: 49 VFVGNISDKCSDEFIRKILNECGNVASWKRIKGSN-GKLQGFGFCHFTDLE 98
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 459 AGATVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDK-NTGKKRGFGFVEFDDYDP 635
+ + K++ I + + + L + FS YG ++NV + D+ + RG+G+VE+D+ +
Sbjct: 128 SASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLED 187
Query: 636 VDK 644
+K
Sbjct: 188 AEK 190
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/70 (27%), Positives = 40/70 (57%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNN 383
++F G L + +DE L F K+ V+++ +T +S+G+GF+++ + D +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSE--DYVRAM 261
Query: 384 RPHKIDGRFV 413
R ++DG++V
Sbjct: 262 R--EMDGKYV 269
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
+++IG + E+++ +F YG +++V + K GFGFVEFDD
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDD 45
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/97 (24%), Positives = 46/97 (47%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNN 383
+I+IG L + +++ ++ F +G+I DV++ GFGF+ + +DA
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDA--- 52
Query: 384 RPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGG 494
H ++G+ + +R + D P G + F GG
Sbjct: 53 -VHDLNGKELGGERVIL--DYSKPRGGGGDRGGFGGG 86
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
+++IG + E+++ +F YG +++V + K GFGFVEFDD
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDD 45
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/97 (24%), Positives = 46/97 (47%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNN 383
+I+IG L + +++ ++ F +G+I DV++ GFGF+ + +DA
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDA--- 52
Query: 384 RPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGG 494
H ++G+ + +R + D P G + F GG
Sbjct: 53 -VHDLNGKELGGERVIL--DYSKPRGGGGDRGGFGGG 86
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
+++IG + E+++ +F YG +++V + K GFGFVEFDD
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDD 45
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/97 (24%), Positives = 46/97 (47%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNN 383
+I+IG L + +++ ++ F +G+I DV++ GFGF+ + +DA
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDA--- 52
Query: 384 RPHKIDGRFVETKRAVARQDIKNPEAGATVKKLFIGG 494
H ++G+ + +R + D P G + F GG
Sbjct: 53 -VHDLNGKELGGERVIL--DYSKPRGGGGDRGGFGGG 86
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.5 bits (78), Expect = 0.033
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 483 FIGGIKDDHEEEELRQYFSN-YGNVQNVSIVTDKNTGKKRGFGFVEFDDYD 632
FIGG+ + EL +F YG+V V I D RG G V F DYD
Sbjct: 289 FIGGVPRPLKAVELAHFFEQTYGHVVCVGIDIDNKFKYPRGSGRVAFSDYD 339
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 474 KKLFIGGIKDDHEEEELRQYFSNYGNVQ 557
+K+F+GG+ +E ++ +FS YG +Q
Sbjct: 88 RKVFVGGLPSCVKESDILNFFSRYGRLQ 115
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 35.1 bits (77), Expect = 0.044
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVV---MKDPKTKRSRGFGFITY-SKAHMVDD 371
++ I L +KT E L+ G+ V++V+ KDPKT GFGFI + KA
Sbjct: 96 RLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTC--AGFGFIQFVEKADAEKG 153
Query: 372 AQNNRPHKIDGRFVETKRAVARQDIK-NPEAGATVKKLFIGGIKDDHEEEELRQYFSNYG 548
+ +K+ GR V A+ + + N K + KD+ EE+ +++ G
Sbjct: 154 REFFNTNKVLGRSVAADWALDKDTYETNAHEEKQHLKKVVKVEKDEKPEEKSKKFDEEEG 213
Query: 549 NVQN 560
++
Sbjct: 214 EEES 217
Score = 34.7 bits (76), Expect = 0.058
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYS----KAHMVDDA 374
+F+ L+Y T +E +K K+G+I ++ K + S+G F+ +S ++ ++
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGV 324
Query: 375 QNNRPHKIDGRFVETKRAVARQDIKNPE 458
++ ID R V+ A+ R++ + E
Sbjct: 325 EDG--VIIDNRLVKANLAIPRKEAADME 350
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKVC 650
+L++G I + E ++ ++ YG + N+S+ K GF FV+F+D + C
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDAC 52
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKVC 650
+L++G I + E ++ ++ YG + N+S+ K GF FV+F+D + C
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDAC 52
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDKVC 650
+L++G I + E ++ ++ YG + N+S+ K GF FV+F+D + C
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDAC 52
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.058
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 11/129 (8%)
Frame = +3
Query: 192 EVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDD 371
++HR +F+GGL T E + F ++G ++ V + D +G +T+ + +
Sbjct: 316 DIHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNR 375
Query: 372 AQNNRPHKIDG-----RFVETKRAVARQDIKNPEAGATVKKLFIG------GIKDDHEEE 518
A + K D +E K V +D+ E G F+ KDDH++E
Sbjct: 376 ALEKKFLKFDNIDSSKTMIEIKPYV-MEDVGCDECGGLWFNPFLSIYDHLKCAKDDHQKE 434
Query: 519 ELRQYFSNY 545
+ N+
Sbjct: 435 QKMAEIKNF 443
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 474 KKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+ +F+GG+ EE+ Q FS +G V V+I D++ G +G V F+
Sbjct: 319 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFE 368
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.058
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 11/129 (8%)
Frame = +3
Query: 192 EVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDD 371
++HR +F+GGL T E + F ++G ++ V + D +G +T+ + +
Sbjct: 316 DIHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNR 375
Query: 372 AQNNRPHKIDG-----RFVETKRAVARQDIKNPEAGATVKKLFIG------GIKDDHEEE 518
A + K D +E K V +D+ E G F+ KDDH++E
Sbjct: 376 ALEKKFLKFDNIDSSKTMIEIKPYV-MEDVGCDECGGLWFNPFLSIYDHLKCAKDDHQKE 434
Query: 519 ELRQYFSNY 545
+ N+
Sbjct: 435 QKMAEIKNF 443
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 474 KKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+ +F+GG+ EE+ Q FS +G V V+I D++ G +G V F+
Sbjct: 319 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFE 368
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 34.7 bits (76), Expect = 0.058
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 11/129 (8%)
Frame = +3
Query: 192 EVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDD 371
++HR +F+GGL T E + F ++G ++ V + D +G +T+ + +
Sbjct: 102 DIHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNR 161
Query: 372 AQNNRPHKIDG-----RFVETKRAVARQDIKNPEAGATVKKLFIG------GIKDDHEEE 518
A + K D +E K V +D+ E G F+ KDDH++E
Sbjct: 162 ALEKKFLKFDNIDSSKTMIEIKPYV-MEDVGCDECGGLWFNPFLSIYDHLKCAKDDHQKE 220
Query: 519 ELRQYFSNY 545
+ N+
Sbjct: 221 QKMAEIKNF 229
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 474 KKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+ +F+GG+ EE+ Q FS +G V V+I D++ G +G V F+
Sbjct: 105 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFE 154
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.058
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 11/129 (8%)
Frame = +3
Query: 192 EVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDD 371
++HR +F+GGL T E + F ++G ++ V + D +G +T+ + +
Sbjct: 316 DIHRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNR 375
Query: 372 AQNNRPHKIDG-----RFVETKRAVARQDIKNPEAGATVKKLFIG------GIKDDHEEE 518
A + K D +E K V +D+ E G F+ KDDH++E
Sbjct: 376 ALEKKFLKFDNIDSSKTMIEIKPYV-MEDVGCDECGGLWFNPFLSIYDHLKCAKDDHQKE 434
Query: 519 ELRQYFSNY 545
+ N+
Sbjct: 435 QKMAEIKNF 443
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 474 KKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFD 623
+ +F+GG+ EE+ Q FS +G V V+I D++ G +G V F+
Sbjct: 319 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFE 368
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 34.3 bits (75), Expect = 0.077
Identities = 14/53 (26%), Positives = 32/53 (60%)
Frame = +3
Query: 468 TVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
+ K+FIGG+ + E+++++ ++G ++ S+ D + G +G+ F E+ D
Sbjct: 289 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLD 340
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA 374
KIFIGGL T++ +K +G + + D + S+G+ F Y + D A
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQA 347
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 34.3 bits (75), Expect = 0.077
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 189 PEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITY 347
PEV+R ++I L YK T E + F K+G + + V T +RG F+ Y
Sbjct: 15 PEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRV---GNTAETRGTAFVVY 64
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 34.3 bits (75), Expect = 0.077
Identities = 14/53 (26%), Positives = 32/53 (60%)
Frame = +3
Query: 468 TVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
+ K+FIGG+ + E+++++ ++G ++ S+ D + G +G+ F E+ D
Sbjct: 289 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLD 340
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA 374
KIFIGGL T++ +K +G + + D + S+G+ F Y + D A
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQA 347
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 34.3 bits (75), Expect = 0.077
Identities = 14/53 (26%), Positives = 32/53 (60%)
Frame = +3
Query: 468 TVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
+ K+FIGG+ + E+++++ ++G ++ S+ D + G +G+ F E+ D
Sbjct: 264 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLD 315
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA 374
KIFIGGL T++ +K +G + + D + S+G+ F Y + D A
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQA 322
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 34.3 bits (75), Expect = 0.077
Identities = 14/53 (26%), Positives = 32/53 (60%)
Frame = +3
Query: 468 TVKKLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDD 626
+ K+FIGG+ + E+++++ ++G ++ S+ D + G +G+ F E+ D
Sbjct: 267 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLD 318
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA 374
KIFIGGL T++ +K +G + + D + S+G+ F Y + D A
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQA 325
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 180 YEEPEVHRKIFIGGLNYKTTDESLKTHFVKWG 275
Y P RKIF+GG+ + T+ +LK F ++G
Sbjct: 288 YTSPTFSRKIFVGGVPWDITEAALKDSFGEFG 319
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 31.5 bits (68), Expect = 0.54
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 423 RAVARQDIKNPEAGATVKKLFIGGI----KDDHEEEELRQYFSNYGNVQNVSIVTDKNTG 590
RA A + +P A T+ L+IG + E++L +F YG+++ + ++T+K
Sbjct: 219 RAAAAPTL-SPPADTTITTLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTEK--- 274
Query: 591 KKRGFGFVEFDDYDPVDK 644
G F+EF + ++
Sbjct: 275 ---GCAFIEFTTREAAER 289
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVD 641
+++IG + + + ++ +F YG + +V + K GFGFV+F D D
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDAD 49
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +3
Query: 204 KIFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA 374
+++IG L + +D ++ F +G++ D V+MK+ GFGF+ + DDA
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSD-VIMKN-------GFGFVDFQDQRDADDA 51
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 30.7 bits (66), Expect = 0.94
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 261 FVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQNN-RPHKIDGRFVETKRAVAR 437
F K G +VDV ++ + + S+GFGF+T D A+ I+GR VE A R
Sbjct: 2 FEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 477 KLFIGGIKDDHEEEELRQYFSNYGNVQNVSI-VTDKNTGKKRGFGFVE 617
+L++GG + E++R + VSI + + + K RGF FV+
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQ 57
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 207 IFIGGLNYKTTDESLKTHFVKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA-QNN 383
+++G L+Y T ++ + F + G++ V++ D K GF F+ Y + A QN
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQNI 98
Query: 384 RPHKIDGRFV 413
++D R +
Sbjct: 99 SNTRMDDRVI 108
>AF100663-3|AAC68980.1| 529|Caenorhabditis elegans
Udp-glucuronosyltransferase protein20 protein.
Length = 529
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 180 YEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDV 290
+ P + I IGGL+ KT +SLK KW +I+D+
Sbjct: 256 FPAPTFDKIIPIGGLSVKTDKKSLKLE-EKWSKILDI 291
>AF100663-2|AAC68981.2| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein19 protein.
Length = 532
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 180 YEEPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIVDV 290
+ P + I IGGL+ KT +SLK KW +I+D+
Sbjct: 259 FPAPTFDKIIPIGGLSVKTDKKSLKLE-EKWSKILDI 294
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 393 KIDGRFVETKRAVARQDIKNPEAGATV--KKLFIGGIKDDHEEEELRQYFSNYGNV 554
++DG + ++ K P + + +K+FIGG+ D EE++ F +G V
Sbjct: 216 RLDGSLMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKV 271
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 186 EPEVHRKIFIGGLNYKTTDESLKTHFVKWGEIV 284
EP RK+FIGGL ++E + F +G+++
Sbjct: 240 EPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Frame = +3
Query: 480 LFIGGIKDDHEEEELRQYFSNYGNVQN------VSIVTDKNTGKKRGFGFVEFDD 626
+F+ GI E + FS G++ + I TD+NTG+ +G + F D
Sbjct: 203 VFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITFVD 257
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 501 DDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
D H + R+ F +YG V +V +V + + F V+F + D K
Sbjct: 270 DRHSPDHYRRRFESYGQVIDVDMV---KSNDNKAFAVVQFTNIDDAQK 314
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVV 293
R + I GL D+ L+ HF K+GEI +V
Sbjct: 14 RHVAISGLPSTLPDDRLQLHFTKFGEIQRLV 44
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 501 DDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
D H + R+ F +YG V +V +V + + F V+F + D K
Sbjct: 285 DRHSPDHYRRRFESYGQVIDVDMV---KSNDNKAFAVVQFTNIDDAQK 329
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVV 293
R + I GL D+ L+ HF K+GEI +V
Sbjct: 14 RHVAISGLPSTLPDDRLQLHFTKFGEIQRLV 44
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 501 DDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
D H + R+ F +YG V +V +V + + F V+F + D K
Sbjct: 285 DRHSPDHYRRRFESYGQVIDVDMV---KSNDNKAFAVVQFTNIDDAQK 329
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVV 293
R + I GL D+ L+ HF K+GEI +V
Sbjct: 14 RHVAISGLPSTLPDDRLQLHFTKFGEIQRLV 44
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 501 DDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
D H + R+ F +YG V +V +V + + F V+F + D K
Sbjct: 270 DRHSPDHYRRRFESYGQVIDVDMV---KSNDNKAFAVVQFTNIDDAQK 314
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVV 293
R + I GL D+ L+ HF K+GEI +V
Sbjct: 14 RHVAISGLPSTLPDDRLQLHFTKFGEIQRLV 44
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 501 DDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
D H + R+ F +YG V +V +V + + F V+F + D K
Sbjct: 285 DRHSPDHYRRRFESYGQVIDVDMV---KSNDNKAFAVVQFTNIDDAQK 329
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVV 293
R + I GL D+ L+ HF K+GEI +V
Sbjct: 14 RHVAISGLPSTLPDDRLQLHFTKFGEIQRLV 44
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 501 DDHEEEELRQYFSNYGNVQNVSIVTDKNTGKKRGFGFVEFDDYDPVDK 644
D H + R+ F +YG V +V +V + + F V+F + D K
Sbjct: 285 DRHSPDHYRRRFESYGQVIDVDMV---KSNDNKAFAVVQFTNIDDAQK 329
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 201 RKIFIGGLNYKTTDESLKTHFVKWGEIVDVV 293
R + I GL D+ L+ HF K+GEI +V
Sbjct: 14 RHVAISGLPSTLPDDRLQLHFTKFGEIQRLV 44
>Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 435 RQDIKNPEAGATVKKLFIGGIK--DDHEEEELRQYFS 539
+++ KN ++ T + F+ +K DDH + + QY+S
Sbjct: 98 KKEPKNLDSSITALQTFLAALKLRDDHRQTQFMQYYS 134
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 348 SKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPEA 461
++AH+V A NRP+ IDG R DI P+A
Sbjct: 342 TRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDA 379
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 348 SKAHMVDDAQNNRPHKIDGRFVETKRAVARQDIKNPEA 461
++AH+V A NRP+ IDG R DI P+A
Sbjct: 342 TRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDA 379
>AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 435 RQDIKNPEAGATVKKLFIGGIK--DDHEEEELRQYFS 539
+++ KN ++ T + F+ +K DDH + + QY+S
Sbjct: 98 KKEPKNLDSSITALQTFLAALKLRDDHRQTQFMQYYS 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,142,318
Number of Sequences: 27780
Number of extensions: 319443
Number of successful extensions: 1042
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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