Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_J21
         (579 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0207 + 11675204-11676542,11676829-11676962,11677171-116774...    29   2.7  

>11_03_0207 +
           11675204-11676542,11676829-11676962,11677171-11677411,
           11677508-11677719,11677837-11677883,11677988-11678090,
           11678594-11678830
          Length = 770

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 24/65 (36%), Positives = 32/65 (49%)
 Frame = -2

Query: 446 KLFVGTSDSSLTLAAVRTSQSQSTGLPTSSLSGCTLLSQEKIFANFF*AALTLCKNIHVR 267
           KLF   S S L LAA   S S ST L  SS  G   LS  ++  +     L +C N++V 
Sbjct: 297 KLFALPSISYLNLAANMLSGSFSTSLTCSSTLGFVDLSTNQLTGD-----LPVCLNVNVN 351

Query: 266 SKESK 252
           ++  K
Sbjct: 352 NRVVK 356


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,493,202
Number of Sequences: 37544
Number of extensions: 259223
Number of successful extensions: 707
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)