Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_J18
(329 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 142 2e-34
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 142 2e-34
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 142 2e-34
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 142 2e-34
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 142 2e-34
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 142 2e-34
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 142 2e-34
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 142 2e-34
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 142 2e-34
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 142 2e-34
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 142 2e-34
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 135 4e-32
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 54 8e-08
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 54 8e-08
AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein. 31 1.1
AY496267-1|AAS45470.1| 1165|Homo sapiens RhoGTPase regulating pr... 28 6.0
AY496266-1|AAS45469.1| 1168|Homo sapiens RhoGTPase regulating pr... 28 6.0
AY496265-1|AAS45468.1| 1155|Homo sapiens RhoGTPase regulating pr... 28 6.0
AY496264-1|AAS45467.1| 1155|Homo sapiens RhoGTPase regulating pr... 28 6.0
AY496263-1|AAS45466.1| 1191|Homo sapiens RhoGTPase regulating pr... 28 6.0
AB037812-1|BAA92629.1| 1194|Homo sapiens KIAA1391 protein protein. 28 6.0
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 142 bits (345), Expect = 2e-34
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +1
Query: 43 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 222
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 223 NPARGPFHFRAPSXILWKTVKGMIPPK 303
NP+RGP+HFRAPS I W+TV+GM+P K
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHK 91
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 2e-34
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +1
Query: 43 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 222
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 223 NPARGPFHFRAPSXILWKTVKGMIPPK 303
NP+RGP+HFRAPS I W+TV+GM+P K
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHK 91
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 2e-34
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +1
Query: 43 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 222
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 223 NPARGPFHFRAPSXILWKTVKGMIPPK 303
NP+RGP+HFRAPS I W+TV+GM+P K
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHK 91
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 2e-34
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +1
Query: 43 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 222
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 223 NPARGPFHFRAPSXILWKTVKGMIPPK 303
NP+RGP+HFRAPS I W+TV+GM+P K
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHK 91
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 2e-34
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +1
Query: 43 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 222
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 223 NPARGPFHFRAPSXILWKTVKGMIPPK 303
NP+RGP+HFRAPS I W+TV+GM+P K
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHK 91
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 142 bits (345), Expect = 2e-34
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +1
Query: 43 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 222
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 62
Query: 223 NPARGPFHFRAPSXILWKTVKGMIPPK 303
NP+RGP+HFRAPS I W+TV+GM+P K
Sbjct: 63 NPSRGPYHFRAPSRIFWRTVRGMLPHK 89
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 2e-34
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +1
Query: 43 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 222
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 223 NPARGPFHFRAPSXILWKTVKGMIPPK 303
NP+RGP+HFRAPS I W+TV+GM+P K
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHK 91
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 2e-34
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +1
Query: 43 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 222
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 223 NPARGPFHFRAPSXILWKTVKGMIPPK 303
NP+RGP+HFRAPS I W+TV+GM+P K
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHK 91
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 2e-34
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +1
Query: 43 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 222
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 223 NPARGPFHFRAPSXILWKTVKGMIPPK 303
NP+RGP+HFRAPS I W+TV+GM+P K
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHK 91
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 142 bits (345), Expect = 2e-34
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +1
Query: 43 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 222
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 223 NPARGPFHFRAPSXILWKTVKGMIPPK 303
NP+RGP+HFRAPS I W+TV+GM+P K
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHK 91
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 2e-34
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = +1
Query: 43 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 222
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 223 NPARGPFHFRAPSXILWKTVKGMIPPK 303
NP+RGP+HFRAPS I W+TV+GM+P K
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHK 91
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 135 bits (326), Expect = 4e-32
Identities = 58/87 (66%), Positives = 74/87 (85%)
Frame = +1
Query: 43 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 222
+ +V+DGRGHLLGRLAA++AK +L G KVVVV CE INISGNF+RNKL ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNT 64
Query: 223 NPARGPFHFRAPSXILWKTVKGMIPPK 303
+P+RGP+HFRAPS + W+TV+GM+P K
Sbjct: 65 SPSRGPYHFRAPSRVFWRTVRGMLPHK 91
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 54.4 bits (125), Expect = 8e-08
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +1
Query: 217 NVNPARGPFHFRAPSXILWKTVKGMIPPK 303
N NP+RGP+HFRAPS I W+TV+GM+P K
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHK 30
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 54.4 bits (125), Expect = 8e-08
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +1
Query: 217 NVNPARGPFHFRAPSXILWKTVKGMIPPK 303
N NP+RGP+HFRAPS I W+TV+GM+P K
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHK 30
>AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein.
Length = 769
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 80 AVWRQSSPRSFSKGTKLLWFAANKSISLATSLGTNSSLCHSCVRGAT*ILLVDLSIL 250
+ WRQS PR + +G + L A ++ +L + T+ + C RG L LS+L
Sbjct: 30 SAWRQSRPREYYEGGRGL-HAPDRETALGLGIATSERMLGIC-RGRRKFLAASLSLL 84
>AY496267-1|AAS45470.1| 1165|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1be protein.
Length = 1165
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 37 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNF-FRNKLKLMSFLRKR 213
SN+ ++IDGR L L + L + VV + I + NF +NK+KL
Sbjct: 56 SNRTLLIDGRAELKRGLQRQERHLFLFNDLFVVAK---IKYNNNFKIKNKIKLTDMWTAS 112
Query: 214 CNVNPARGPFHFRAPSXILWKTV 282
C G + + W TV
Sbjct: 113 CVDEVGEGNTNAMKSFVLGWPTV 135
>AY496266-1|AAS45469.1| 1168|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1c protein.
Length = 1168
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 37 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNF-FRNKLKLMSFLRKR 213
SN+ ++IDGR L L + L + VV + I + NF +NK+KL
Sbjct: 59 SNRTLLIDGRAELKRGLQRQERHLFLFNDLFVVAK---IKYNNNFKIKNKIKLTDMWTAS 115
Query: 214 CNVNPARGPFHFRAPSXILWKTV 282
C G + + W TV
Sbjct: 116 CVDEVGEGNTNAMKSFVLGWPTV 138
>AY496265-1|AAS45468.1| 1155|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1e protein.
Length = 1155
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 37 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNF-FRNKLKLMSFLRKR 213
SN+ ++IDGR L L + L + VV + I + NF +NK+KL
Sbjct: 46 SNRTLLIDGRAELKRGLQRQERHLFLFNDLFVVAK---IKYNNNFKIKNKIKLTDMWTAS 102
Query: 214 CNVNPARGPFHFRAPSXILWKTV 282
C G + + W TV
Sbjct: 103 CVDEVGEGNTNAMKSFVLGWPTV 125
>AY496264-1|AAS45467.1| 1155|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1d protein.
Length = 1155
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 37 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNF-FRNKLKLMSFLRKR 213
SN+ ++IDGR L L + L + VV + I + NF +NK+KL
Sbjct: 46 SNRTLLIDGRAELKRGLQRQERHLFLFNDLFVVAK---IKYNNNFKIKNKIKLTDMWTAS 102
Query: 214 CNVNPARGPFHFRAPSXILWKTV 282
C G + + W TV
Sbjct: 103 CVDEVGEGNTNAMKSFVLGWPTV 125
>AY496263-1|AAS45466.1| 1191|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1ad protein.
Length = 1191
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 37 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNF-FRNKLKLMSFLRKR 213
SN+ ++IDGR L L + L + VV + I + NF +NK+KL
Sbjct: 82 SNRTLLIDGRAELKRGLQRQERHLFLFNDLFVVAK---IKYNNNFKIKNKIKLTDMWTAS 138
Query: 214 CNVNPARGPFHFRAPSXILWKTV 282
C G + + W TV
Sbjct: 139 CVDEVGEGNTNAMKSFVLGWPTV 161
>AB037812-1|BAA92629.1| 1194|Homo sapiens KIAA1391 protein protein.
Length = 1194
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 37 SNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNF-FRNKLKLMSFLRKR 213
SN+ ++IDGR L L + L + VV + I + NF +NK+KL
Sbjct: 85 SNRTLLIDGRAELKRGLQRQERHLFLFNDLFVVAK---IKYNNNFKIKNKIKLTDMWTAS 141
Query: 214 CNVNPARGPFHFRAPSXILWKTV 282
C G + + W TV
Sbjct: 142 CVDEVGEGNTNAMKSFVLGWPTV 164
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,117,733
Number of Sequences: 237096
Number of extensions: 968123
Number of successful extensions: 1859
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1859
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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