Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_J17
(656 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 271 6e-73
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 271 6e-73
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 271 6e-73
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 269 2e-72
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 269 2e-72
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 148 8e-36
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 139 4e-33
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 271 bits (664), Expect = 6e-73
Identities = 124/207 (59%), Positives = 148/207 (71%)
Frame = +2
Query: 32 VAQKIFSTPXMGLWDSIPKRGPXXXXXXXXXXXKTTXXXXXXXXXXXXYKAGMTHVVREP 211
++ + FS P G PK+ K YKAGMTH+VRE
Sbjct: 12 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 71
Query: 212 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 391
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 72 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 131
Query: 392 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 571
NWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 132 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 191
Query: 572 MEIQLNGGTIEDKVKWAREHLEKPIPV 652
MEIQLNGG+IEDKVKWAREHLEKPI V
Sbjct: 192 MEIQLNGGSIEDKVKWAREHLEKPIQV 218
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 271 bits (664), Expect = 6e-73
Identities = 124/207 (59%), Positives = 148/207 (71%)
Frame = +2
Query: 32 VAQKIFSTPXMGLWDSIPKRGPXXXXXXXXXXXKTTXXXXXXXXXXXXYKAGMTHVVREP 211
++ + FS P G PK+ K YKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 212 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 391
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 392 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 571
NWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180
Query: 572 MEIQLNGGTIEDKVKWAREHLEKPIPV 652
MEIQLNGG+IEDKVKWAREHLEKPI V
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQV 207
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 271 bits (664), Expect = 6e-73
Identities = 124/207 (59%), Positives = 148/207 (71%)
Frame = +2
Query: 32 VAQKIFSTPXMGLWDSIPKRGPXXXXXXXXXXXKTTXXXXXXXXXXXXYKAGMTHVVREP 211
++ + FS P G PK+ K YKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 212 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 391
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 392 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 571
NWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180
Query: 572 MEIQLNGGTIEDKVKWAREHLEKPIPV 652
MEIQLNGG+IEDKVKWAREHLEKPI V
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQV 207
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 269 bits (660), Expect = 2e-72
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = +2
Query: 176 YKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAE 355
YKAGMTH+VRE DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+
Sbjct: 36 YKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQ 95
Query: 356 HMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 535
H+SE+CRRRFYKNWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q+
Sbjct: 96 HLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQI 155
Query: 536 KLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPV 652
+L+KQRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V
Sbjct: 156 RLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQV 194
Score = 68.9 bits (161), Expect = 6e-12
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = +1
Query: 70 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFI 171
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FI
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFI 34
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 269 bits (660), Expect = 2e-72
Identities = 117/159 (73%), Positives = 137/159 (86%)
Frame = +2
Query: 176 YKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAE 355
YKAGMTH+VRE DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+
Sbjct: 36 YKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQ 95
Query: 356 HMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 535
H+SE+CRRRFYKNWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q+
Sbjct: 96 HLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQI 155
Query: 536 KLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPV 652
+L+KQRQKKAH+MEIQLNGG+IEDKVKWAREHLEKPI V
Sbjct: 156 RLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQV 194
Score = 68.9 bits (161), Expect = 6e-12
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = +1
Query: 70 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFI 171
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FI
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFI 34
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 148 bits (358), Expect = 8e-36
Identities = 68/123 (55%), Positives = 81/123 (65%)
Frame = +2
Query: 32 VAQKIFSTPXMGLWDSIPKRGPXXXXXXXXXXXKTTXXXXXXXXXXXXYKAGMTHVVREP 211
++ + FS P G PK+ K YKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 212 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 391
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 392 NWY 400
NWY
Sbjct: 121 NWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 139 bits (336), Expect = 4e-33
Identities = 59/73 (80%), Positives = 68/73 (93%)
Frame = +2
Query: 176 YKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAE 355
YKAGMTH+VRE DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+
Sbjct: 36 YKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQ 95
Query: 356 HMSEDCRRRFYKN 394
H+SE+CRRRFYKN
Sbjct: 96 HLSEECRRRFYKN 108
Score = 68.9 bits (161), Expect = 6e-12
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = +1
Query: 70 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFI 171
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FI
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFI 34
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,955,475
Number of Sequences: 53049
Number of extensions: 648332
Number of successful extensions: 1512
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1508
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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