Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_J10
(655 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 297 7e-82
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 152 4e-38
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 152 4e-38
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 151 6e-38
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 151 6e-38
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 95 8e-21
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 44 2e-05
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 44 3e-05
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 44 3e-05
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 30 0.25
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 28 1.0
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 27 2.4
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 3.1
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 3.1
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 26 5.5
SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomy... 26 5.5
SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13 |Schizo... 25 9.5
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 297 bits (730), Expect = 7e-82
Identities = 145/151 (96%), Positives = 150/151 (99%)
Frame = +1
Query: 160 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 339
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 340 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 519
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 520 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 612
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 151
Score = 297 bits (730), Expect = 7e-82
Identities = 145/151 (96%), Positives = 150/151 (99%)
Frame = +1
Query: 160 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 339
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 340 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 519
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 196
Query: 520 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 612
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 227
Score = 297 bits (730), Expect = 7e-82
Identities = 145/151 (96%), Positives = 150/151 (99%)
Frame = +1
Query: 160 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 339
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 340 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 519
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 272
Query: 520 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 612
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 303
Score = 297 bits (730), Expect = 7e-82
Identities = 145/151 (96%), Positives = 150/151 (99%)
Frame = +1
Query: 160 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 339
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 340 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 519
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 348
Query: 520 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 612
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 379
Score = 152 bits (369), Expect = 4e-38
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +1
Query: 160 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 339
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 340 IQKESTLHLVLRLRGGM 390
IQKESTLHLVLRLRGG+
Sbjct: 365 IQKESTLHLVLRLRGGL 381
Score = 34.3 bits (75), Expect = 0.016
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 611 GGMQIFVKTLTGKTI 655
GGMQIFVKTLTGKTI
Sbjct: 75 GGMQIFVKTLTGKTI 89
Score = 34.3 bits (75), Expect = 0.016
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 611 GGMQIFVKTLTGKTI 655
GGMQIFVKTLTGKTI
Sbjct: 151 GGMQIFVKTLTGKTI 165
Score = 34.3 bits (75), Expect = 0.016
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 611 GGMQIFVKTLTGKTI 655
GGMQIFVKTLTGKTI
Sbjct: 227 GGMQIFVKTLTGKTI 241
Score = 34.3 bits (75), Expect = 0.016
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 611 GGMQIFVKTLTGKTI 655
GGMQIFVKTLTGKTI
Sbjct: 303 GGMQIFVKTLTGKTI 317
Score = 29.5 bits (63), Expect = 0.44
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 617 MQIFVKTLTGKTI 655
MQIFVKTLTGKTI
Sbjct: 1 MQIFVKTLTGKTI 13
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 152 bits (369), Expect = 4e-38
Identities = 76/88 (86%), Positives = 81/88 (92%), Gaps = 1/88 (1%)
Frame = +1
Query: 160 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 339
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 340 IQKESTLHLVLRLRGG-MQIFVKTLTGK 420
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 150 bits (363), Expect = 2e-37
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +1
Query: 388 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 567
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 568 IQKESTLHLVLRLRG 612
IQKESTLHLVLRLRG
Sbjct: 61 IQKESTLHLVLRLRG 75
Score = 29.5 bits (63), Expect = 0.44
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 617 MQIFVKTLTGKTI 655
MQIFVKTLTGKTI
Sbjct: 1 MQIFVKTLTGKTI 13
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 152 bits (369), Expect = 4e-38
Identities = 76/88 (86%), Positives = 81/88 (92%), Gaps = 1/88 (1%)
Frame = +1
Query: 160 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 339
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 340 IQKESTLHLVLRLRGG-MQIFVKTLTGK 420
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 150 bits (363), Expect = 2e-37
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +1
Query: 388 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 567
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 568 IQKESTLHLVLRLRG 612
IQKESTLHLVLRLRG
Sbjct: 61 IQKESTLHLVLRLRG 75
Score = 29.5 bits (63), Expect = 0.44
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 617 MQIFVKTLTGKTI 655
MQIFVKTLTGKTI
Sbjct: 1 MQIFVKTLTGKTI 13
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 151 bits (367), Expect = 6e-38
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +1
Query: 160 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 339
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 340 IQKESTLHLVLRLRGG 387
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 150 bits (363), Expect = 2e-37
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +1
Query: 388 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 567
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 568 IQKESTLHLVLRLRG 612
IQKESTLHLVLRLRG
Sbjct: 61 IQKESTLHLVLRLRG 75
Score = 29.5 bits (63), Expect = 0.44
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 617 MQIFVKTLTGKTI 655
MQIFVKTLTGKTI
Sbjct: 1 MQIFVKTLTGKTI 13
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 151 bits (367), Expect = 6e-38
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +1
Query: 160 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 339
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 340 IQKESTLHLVLRLRGG 387
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 150 bits (363), Expect = 2e-37
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +1
Query: 388 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 567
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 568 IQKESTLHLVLRLRG 612
IQKESTLHLVLRLRG
Sbjct: 61 IQKESTLHLVLRLRG 75
Score = 29.5 bits (63), Expect = 0.44
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 617 MQIFVKTLTGKTI 655
MQIFVKTLTGKTI
Sbjct: 1 MQIFVKTLTGKTI 13
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 95.1 bits (226), Expect = 8e-21
Identities = 41/76 (53%), Positives = 57/76 (75%)
Frame = +1
Query: 160 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 339
M I VKTLTGK I L+++P+D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 340 IQKESTLHLVLRLRGG 387
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 89.4 bits (212), Expect = 4e-19
Identities = 39/75 (52%), Positives = 55/75 (73%)
Frame = +1
Query: 388 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 567
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 568 IQKESTLHLVLRLRG 612
++ S LHLVL LRG
Sbjct: 61 LEGGSVLHLVLALRG 75
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +1
Query: 187 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 360
GK LE+EP++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 415 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 588
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 43.6 bits (98), Expect = 3e-05
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +1
Query: 388 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 567
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 568 IQKESTLHLVLRLRGRHADLREN-SDR 645
IQ ++HLV L A N SDR
Sbjct: 64 IQDGHSIHLVKTLGQNPAAAATNVSDR 90
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +1
Query: 160 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 339
+ + +K + + V+ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 340 IQKESTLHLVLRL 378
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 43.6 bits (98), Expect = 3e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +1
Query: 418 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 579
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
Score = 41.9 bits (94), Expect = 8e-05
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 160 MQIFVKTLTGKTITLEVEPSDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 336
M + K L + + +DT I +K KIQ ++ ++Q+LI++G+ L D +T+ +Y
Sbjct: 1 MNLTFKNLQQQKFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEY 60
Query: 337 NIQKE 351
NI+++
Sbjct: 61 NIKEQ 65
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 30.3 bits (65), Expect = 0.25
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 174 HKDLHDDLEDTIISLLSVVCRTIMSFVFYIKQNGVEKHLILNYK 43
H + E++I S L+ C+ I V IK VEK L LN+K
Sbjct: 599 HSLRDSNTENSIPSPLTFACKEIRKLVADIKPVSVEKQLALNWK 642
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +3
Query: 309 GRRTHLVRLQHSKRIHTPSCIASSWRHADLRENSDRKDHHFGSRSFGH 452
G R V L ++H P + A+ +EN HHF R F +
Sbjct: 143 GNRKIRVLLDQGNQMHRPVAPETKAEEAEHQENEKHHRHHFRLRKFAN 190
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 27.1 bits (57), Expect = 2.4
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Frame = +1
Query: 403 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA------GKQLE-------D 543
K TGKT + + + ++ K+KIQ +P + L + GK +
Sbjct: 89 KNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTG 148
Query: 544 GRTLSDYNIQKESTLHLVLRLRGRHADL 627
G TL D I+ T+H+V+ GR DL
Sbjct: 149 GTTLRDDIIRLNDTVHIVVGTPGRVLDL 176
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 26.6 bits (56), Expect = 3.1
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +1
Query: 163 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 336
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 337 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 426
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
Score = 26.2 bits (55), Expect = 4.1
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 391 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 564
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 565 NIQKESTLHLVL 600
+ T HLV+
Sbjct: 65 DATDLVTFHLVI 76
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 384 STKTQYKMECGFFLNV 337
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 129 LSVVCRTIMSFVFYIKQNGVEKHLILNY 46
LS +C+TI+S + + + V L +NY
Sbjct: 1737 LSEICKTIISMIKVVADSSVVPDLTINY 1764
>SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 756
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 30 RDRQAYSLK*GVFLLHFVLYKKQSS*LFDI 119
++RQAY+ VF H+ LY Q S F I
Sbjct: 354 KERQAYNALSSVFEPHYTLYFNQQSQEFSI 383
>SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 344 KKNPHSILYCVFVEAC 391
+K+P+S L C VEAC
Sbjct: 305 RKHPYSTLLCEIVEAC 320
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,911,421
Number of Sequences: 5004
Number of extensions: 62784
Number of successful extensions: 210
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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