Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_J04
         (657 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014654-1|AAT27278.1|  217|Drosophila melanogaster RE06042p pro...   273   1e-73
AE014296-2043|AAF50002.2|  217|Drosophila melanogaster CG7283-PA...   273   1e-73
AY113239-1|AAM29244.1|  216|Drosophila melanogaster AT11516p pro...   177   8e-45
AE014297-1926|AAF55120.1|  216|Drosophila melanogaster CG3843-PA...   177   8e-45
BT001825-1|AAN71580.1|  155|Drosophila melanogaster RH43519p pro...   167   2e-41
BT001758-1|AAN71513.1|  150|Drosophila melanogaster RH06366p pro...   140   2e-33
AE014296-2045|AAN12245.1|  140|Drosophila melanogaster CG7283-PC...   140   2e-33
AE014296-2044|AAN12244.1|   57|Drosophila melanogaster CG7283-PB...    95   7e-20
AY051627-1|AAK93051.1|  517|Drosophila melanogaster GH27756p pro...    30   3.2  
AE014298-2517|AAF48693.1|  517|Drosophila melanogaster CG4955-PA...    30   3.2  

>BT014654-1|AAT27278.1|  217|Drosophila melanogaster RE06042p
           protein.
          Length = 217

 Score =  273 bits (670), Expect = 1e-73
 Identities = 138/190 (72%), Positives = 147/190 (77%)
 Frame = +1

Query: 52  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 231
           M+SKVSRDTLYE VN +L++S  KKR FLETVELQIGLKNYDPQKDKRFSGTVKLK+IPR
Sbjct: 1   MASKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60

Query: 232 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 411
           PKM+VC+LGDQQHCDEAK  NV  M                           SESLIKQI
Sbjct: 61  PKMKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQI 120

Query: 412 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 591
           PRLLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV M  DELA
Sbjct: 121 PRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELA 180

Query: 592 QNVHLSINFL 621
           QNV+LSINFL
Sbjct: 181 QNVNLSINFL 190


>AE014296-2043|AAF50002.2|  217|Drosophila melanogaster CG7283-PA,
           isoform A protein.
          Length = 217

 Score =  273 bits (670), Expect = 1e-73
 Identities = 138/190 (72%), Positives = 147/190 (77%)
 Frame = +1

Query: 52  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 231
           M+SKVSRDTLYE VN +L++S  KKR FLETVELQIGLKNYDPQKDKRFSGTVKLK+IPR
Sbjct: 1   MASKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60

Query: 232 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 411
           PKM+VC+LGDQQHCDEAK  NV  M                           SESLIKQI
Sbjct: 61  PKMKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQI 120

Query: 412 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 591
           PRLLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV M  DELA
Sbjct: 121 PRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELA 180

Query: 592 QNVHLSINFL 621
           QNV+LSINFL
Sbjct: 181 QNVNLSINFL 190


>AY113239-1|AAM29244.1|  216|Drosophila melanogaster AT11516p
           protein.
          Length = 216

 Score =  177 bits (432), Expect = 8e-45
 Identities = 94/190 (49%), Positives = 122/190 (64%)
 Frame = +1

Query: 52  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 231
           M SKVSRDT+Y  V  +L +S+ K  + LETVELQIGL++YDP K KRF G+V L ++  
Sbjct: 1   MVSKVSRDTIYVAVKNILLNSQAKGPDCLETVELQIGLRDYDPDKCKRFHGSVLLHHLAV 60

Query: 232 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 411
           P+++VCV GDQ+HC +AK + V C+                           SES+IKQI
Sbjct: 61  PQLKVCVFGDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESIIKQI 120

Query: 412 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 591
           PRLLGPGL  AGKF   L+  ESM+ KI ++  T K  MK++ CLSV VGHV M P+ELA
Sbjct: 121 PRLLGPGLTNAGKFLTPLARGESMSSKI-KILSTKKKHMKRMECLSVNVGHVGMHPEELA 179

Query: 592 QNVHLSINFL 621
           +N+ +SINFL
Sbjct: 180 RNIAISINFL 189


>AE014297-1926|AAF55120.1|  216|Drosophila melanogaster CG3843-PA
           protein.
          Length = 216

 Score =  177 bits (432), Expect = 8e-45
 Identities = 94/190 (49%), Positives = 122/190 (64%)
 Frame = +1

Query: 52  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 231
           M SKVSRDT+Y  V  +L +S+ K  + LETVELQIGL++YDP K KRF G+V L ++  
Sbjct: 1   MVSKVSRDTIYVAVKNILLNSQAKGPDCLETVELQIGLRDYDPDKCKRFHGSVLLHHLAV 60

Query: 232 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 411
           P+++VCV GDQ+HC +AK + V C+                           SES+IKQI
Sbjct: 61  PQLKVCVFGDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESIIKQI 120

Query: 412 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 591
           PRLLGPGL  AGKF   L+  ESM+ KI ++  T K  MK++ CLSV VGHV M P+ELA
Sbjct: 121 PRLLGPGLTNAGKFLTPLARGESMSSKI-KILSTKKKHMKRMECLSVNVGHVGMHPEELA 179

Query: 592 QNVHLSINFL 621
           +N+ +SINFL
Sbjct: 180 RNIAISINFL 189


>BT001825-1|AAN71580.1|  155|Drosophila melanogaster RH43519p
           protein.
          Length = 155

 Score =  167 bits (405), Expect = 2e-41
 Identities = 86/128 (67%), Positives = 90/128 (70%)
 Frame = +1

Query: 238 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 417
           M+VC+LGDQQHCDEAK  NV  M                           SESLIKQIPR
Sbjct: 1   MKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPR 60

Query: 418 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 597
           LLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV M  DELAQN
Sbjct: 61  LLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQN 120

Query: 598 VHLSINFL 621
           V+LSINFL
Sbjct: 121 VNLSINFL 128


>BT001758-1|AAN71513.1|  150|Drosophila melanogaster RH06366p
           protein.
          Length = 150

 Score =  140 bits (338), Expect = 2e-33
 Identities = 69/78 (88%), Positives = 71/78 (91%)
 Frame = +1

Query: 388 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 567
           SESLIKQIPRLLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV
Sbjct: 46  SESLIKQIPRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHV 105

Query: 568 DMTPDELAQNVHLSINFL 621
            M  DELAQNV+LSINFL
Sbjct: 106 GMKSDELAQNVNLSINFL 123



 Score = 39.5 bits (88), Expect = 0.004
 Identities = 21/42 (50%), Positives = 30/42 (71%)
 Frame = +1

Query: 52  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYD 177
           M+SKVSRDTLYE VN +L++S  KK N  + +  ++  K+YD
Sbjct: 1   MASKVSRDTLYEGVNGLLEASAKKKLNKNKKLVKKLA-KSYD 41


>AE014296-2045|AAN12245.1|  140|Drosophila melanogaster CG7283-PC,
           isoform C protein.
          Length = 140

 Score =  140 bits (338), Expect = 2e-33
 Identities = 69/78 (88%), Positives = 71/78 (91%)
 Frame = +1

Query: 388 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 567
           SESLIKQIPRLLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV
Sbjct: 36  SESLIKQIPRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHV 95

Query: 568 DMTPDELAQNVHLSINFL 621
            M  DELAQNV+LSINFL
Sbjct: 96  GMKSDELAQNVNLSINFL 113


>AE014296-2044|AAN12244.1|   57|Drosophila melanogaster CG7283-PB,
           isoform B protein.
          Length = 57

 Score = 95.1 bits (226), Expect = 7e-20
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = +1

Query: 52  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 213
           M+SKVSRDTLYE VN +L++S  KKR FLETVELQIGLKNYDPQKDKRFSGTVK
Sbjct: 1   MASKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVK 54


>AY051627-1|AAK93051.1|  517|Drosophila melanogaster GH27756p
           protein.
          Length = 517

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -1

Query: 381 ESIKFFGQFLDKLFVLIQFFQSLSIHTWHIQGFSLVTMLLVSKNAN 244
           E + FF  FL ++  ++ FF   +I  W   G+ +V +L+  KNA+
Sbjct: 339 EQLNFFITFLLEVLGVLVFFAICTITFWITLGYHVVQLLVDLKNAD 384


>AE014298-2517|AAF48693.1|  517|Drosophila melanogaster CG4955-PA
           protein.
          Length = 517

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -1

Query: 381 ESIKFFGQFLDKLFVLIQFFQSLSIHTWHIQGFSLVTMLLVSKNAN 244
           E + FF  FL ++  ++ FF   +I  W   G+ +V +L+  KNA+
Sbjct: 339 EQLNFFITFLLEVLGVLVFFAICTITFWITLGYHVVQLLVDLKNAD 384


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,287,351
Number of Sequences: 53049
Number of extensions: 637568
Number of successful extensions: 1599
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)