Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_J02
         (432 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2809|AAF49405.1|   78|Drosophila melanogaster CG9669-PA...    58   7e-09
BT011105-1|AAR82771.1|   74|Drosophila melanogaster LP09435p pro...    56   2e-08
AY122183-1|AAM52695.1| 1380|Drosophila melanogaster LD40412p pro...    28   4.7  
AE014297-4410|AAF56915.1| 1380|Drosophila melanogaster CG1911-PA...    28   4.7  
AE014297-3882|AAF56535.1|  296|Drosophila melanogaster CG14546-P...    27   8.2  
AE013599-3384|AAF46837.1|  775|Drosophila melanogaster CG10955-P...    27   8.2  

>AE014296-2809|AAF49405.1|   78|Drosophila melanogaster CG9669-PA
           protein.
          Length = 78

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
 Frame = +2

Query: 110 IESMIRYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRD--MFKELLLSLVA 283
           ++ M RY SP+NPAVFPH             AWFF++ V S K+S++  + KELL+SL A
Sbjct: 1   MDVMQRYVSPVNPAVFPHLATVLLVIGTFFTAWFFIF-VVSRKSSKESTLIKELLISLCA 59

Query: 284 AXXXXXXXXXXXXWVGIYV 340
           +             VGIYV
Sbjct: 60  SIFLGFGIVFLLLTVGIYV 78


>BT011105-1|AAR82771.1|   74|Drosophila melanogaster LP09435p
           protein.
          Length = 74

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +2

Query: 125 RYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRD--MFKELLLSLVAAXXXX 298
           RY SP+NPAVFPH             AWFF++ V S K+S++  + KELL+SL A+    
Sbjct: 2   RYVSPVNPAVFPHLATVLLVIGTFFTAWFFIF-VVSRKSSKESTLIKELLISLCASIFLG 60

Query: 299 XXXXXXXXWVGIYV 340
                    VGIYV
Sbjct: 61  FGIVFLLLTVGIYV 74


>AY122183-1|AAM52695.1| 1380|Drosophila melanogaster LD40412p protein.
          Length = 1380

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 321  SNKNKIPKPENKAATNDKSNSLNISLE 241
            SN NK+ KPE KA   +  N LN  L+
Sbjct: 1288 SNTNKLAKPELKAVVTEFENRLNECLQ 1314


>AE014297-4410|AAF56915.1| 1380|Drosophila melanogaster CG1911-PA
            protein.
          Length = 1380

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 321  SNKNKIPKPENKAATNDKSNSLNISLE 241
            SN NK+ KPE KA   +  N LN  L+
Sbjct: 1288 SNTNKLAKPELKAVVTEFENRLNECLQ 1314


>AE014297-3882|AAF56535.1|  296|Drosophila melanogaster CG14546-PA
           protein.
          Length = 296

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -1

Query: 330 PTHSNKNKIPKPENKAATNDKSNSLNISLEALVLVTS*TKNQAVKNIPIPSNKKVR 163
           PT  N+N+     +K + +  S S N   + +V + + T    V+N PIP  K +R
Sbjct: 236 PTRFNQNQ---HASKVSRSSSSRSSNHRQDNIVCLPAMTYPPYVRNCPIPRQKLIR 288


>AE013599-3384|AAF46837.1|  775|Drosophila melanogaster CG10955-PA
           protein.
          Length = 775

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 333 IPTHSNKNKIPKPENKAATNDKSNSLNI 250
           +P   N N +PKP +K A      SLN+
Sbjct: 738 VPLPVNTNSVPKPASKPAETVSKRSLNL 765


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,876,191
Number of Sequences: 53049
Number of extensions: 319095
Number of successful extensions: 623
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)