Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_J01
(668 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063302-1|AAH63302.1| 1278|Homo sapiens Niemann-Pick disease, t... 100 9e-21
AF338230-1|AAK25791.1| 1278|Homo sapiens Niemann-Pick disease C1... 100 9e-21
AF157379-1|AAD48006.1| 1278|Homo sapiens Niemann-Pick C1 protein... 100 9e-21
AF002020-1|AAB63982.1| 1278|Homo sapiens Niemann-Pick C disease ... 100 9e-21
AB209048-1|BAD92285.1| 1289|Homo sapiens Niemann-Pick disease, t... 100 9e-21
BC117178-1|AAI17179.1| 1332|Homo sapiens NPC1L1 protein protein. 63 1e-09
AY515256-1|AAS56939.1| 1332|Homo sapiens NPC1L1 splice variant p... 63 1e-09
AY437865-1|AAR97886.1| 1332|Homo sapiens Niemann-Pick C1-like 1 ... 63 1e-09
AF192523-1|AAF20397.1| 724|Homo sapiens truncated Niemann-Pick ... 63 1e-09
AF192522-1|AAF20396.1| 1359|Homo sapiens Niemann-Pick C1-like pr... 63 1e-09
BC130279-1|AAI30280.1| 1195|Homo sapiens immunoglobulin superfam... 30 8.6
BC110651-1|AAI10652.1| 1195|Homo sapiens immunoglobulin superfam... 30 8.6
AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repe... 30 8.6
AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repe... 30 8.6
AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repe... 30 8.6
AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repe... 30 8.6
AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repe... 30 8.6
AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repe... 30 8.6
AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repe... 30 8.6
AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repe... 30 8.6
AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repe... 30 8.6
AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repe... 30 8.6
AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repe... 30 8.6
AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repe... 30 8.6
AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repe... 30 8.6
AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repe... 30 8.6
AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repe... 30 8.6
AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repe... 30 8.6
AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repe... 30 8.6
AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repe... 30 8.6
AL356748-2|CAI22421.1| 1194|Homo sapiens immunoglobulin superfam... 30 8.6
AL356748-1|CAI22422.1| 1214|Homo sapiens immunoglobulin superfam... 30 8.6
AL355794-5|CAI22766.1| 1194|Homo sapiens immunoglobulin superfam... 30 8.6
AL355794-4|CAI22765.1| 1214|Homo sapiens immunoglobulin superfam... 30 8.6
AK097809-1|BAC05175.1| 657|Homo sapiens protein. 30 8.6
AF031174-1|AAC72013.1| 1215|Homo sapiens Ig-like membrane protei... 30 8.6
AB007935-1|BAA32311.2| 1214|Homo sapiens KIAA0466 protein protein. 30 8.6
>BC063302-1|AAH63302.1| 1278|Homo sapiens Niemann-Pick disease, type
C1 protein.
Length = 1278
Score = 99.5 bits (237), Expect = 9e-21
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Frame = +2
Query: 311 CIWYGVCANSTEHKMVNCFYDGPAKPIEEKAMKIIEQYCPEIAKGGYS-CCNYEQLNQLK 487
C+WYG C + K NC Y GP KP+ + ++++ CP G S CC+ QL LK
Sbjct: 25 CVWYGECGIAYGDKRYNCEYSGPPKPLPKDGYDLVQELCPGFFFGNVSLCCDVRQLQTLK 84
Query: 488 VNIALAENLLGRCPTCFQNFLKPICGMACAVDQSKYLKPVKTEQF-----NGTHRRISEI 652
N+ L L RCP+CF N L C + C+ QS++L TE + N T + E+
Sbjct: 85 DNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTNVKEL 144
Query: 653 DYYL 664
YY+
Sbjct: 145 QYYV 148
>AF338230-1|AAK25791.1| 1278|Homo sapiens Niemann-Pick disease C1
protein protein.
Length = 1278
Score = 99.5 bits (237), Expect = 9e-21
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Frame = +2
Query: 311 CIWYGVCANSTEHKMVNCFYDGPAKPIEEKAMKIIEQYCPEIAKGGYS-CCNYEQLNQLK 487
C+WYG C + K NC Y GP KP+ + ++++ CP G S CC+ QL LK
Sbjct: 25 CVWYGECGIAYGDKRYNCEYSGPPKPLPKDGYDLVQELCPGFFFGNVSLCCDVRQLQTLK 84
Query: 488 VNIALAENLLGRCPTCFQNFLKPICGMACAVDQSKYLKPVKTEQF-----NGTHRRISEI 652
N+ L L RCP+CF N L C + C+ QS++L TE + N T + E+
Sbjct: 85 DNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTNVKEL 144
Query: 653 DYYL 664
YY+
Sbjct: 145 QYYV 148
>AF157379-1|AAD48006.1| 1278|Homo sapiens Niemann-Pick C1 protein
protein.
Length = 1278
Score = 99.5 bits (237), Expect = 9e-21
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Frame = +2
Query: 311 CIWYGVCANSTEHKMVNCFYDGPAKPIEEKAMKIIEQYCPEIAKGGYS-CCNYEQLNQLK 487
C+WYG C + K NC Y GP KP+ + ++++ CP G S CC+ QL LK
Sbjct: 25 CVWYGECGIAYGDKRYNCEYSGPPKPLPKDGYDLVQELCPGFFFGNVSLCCDVRQLQTLK 84
Query: 488 VNIALAENLLGRCPTCFQNFLKPICGMACAVDQSKYLKPVKTEQF-----NGTHRRISEI 652
N+ L L RCP+CF N L C + C+ QS++L TE + N T + E+
Sbjct: 85 DNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTNVKEL 144
Query: 653 DYYL 664
YY+
Sbjct: 145 QYYV 148
>AF002020-1|AAB63982.1| 1278|Homo sapiens Niemann-Pick C disease
protein protein.
Length = 1278
Score = 99.5 bits (237), Expect = 9e-21
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Frame = +2
Query: 311 CIWYGVCANSTEHKMVNCFYDGPAKPIEEKAMKIIEQYCPEIAKGGYS-CCNYEQLNQLK 487
C+WYG C + K NC Y GP KP+ + ++++ CP G S CC+ QL LK
Sbjct: 25 CVWYGECGIAYGDKRYNCEYSGPPKPLPKDGYDLVQELCPGFFFGNVSLCCDVRQLQTLK 84
Query: 488 VNIALAENLLGRCPTCFQNFLKPICGMACAVDQSKYLKPVKTEQF-----NGTHRRISEI 652
N+ L L RCP+CF N L C + C+ QS++L TE + N T + E+
Sbjct: 85 DNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTNVKEL 144
Query: 653 DYYL 664
YY+
Sbjct: 145 QYYV 148
>AB209048-1|BAD92285.1| 1289|Homo sapiens Niemann-Pick disease, type
C1 variant protein.
Length = 1289
Score = 99.5 bits (237), Expect = 9e-21
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Frame = +2
Query: 311 CIWYGVCANSTEHKMVNCFYDGPAKPIEEKAMKIIEQYCPEIAKGGYS-CCNYEQLNQLK 487
C+WYG C + K NC Y GP KP+ + ++++ CP G S CC+ QL LK
Sbjct: 36 CVWYGECGIAYGDKRYNCEYSGPPKPLPKDGYDLVQELCPGFFFGNVSLCCDVRQLQTLK 95
Query: 488 VNIALAENLLGRCPTCFQNFLKPICGMACAVDQSKYLKPVKTEQF-----NGTHRRISEI 652
N+ L L RCP+CF N L C + C+ QS++L TE + N T + E+
Sbjct: 96 DNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTNVKEL 155
Query: 653 DYYL 664
YY+
Sbjct: 156 QYYV 159
>BC117178-1|AAI17179.1| 1332|Homo sapiens NPC1L1 protein protein.
Length = 1332
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Frame = +2
Query: 287 SALAEDGHCIWYGVCANSTEHK-------MVNCFYDGPAKPIEEKAMKIIEQYCPEIAKG 445
+ + + G+C +Y C + E V+C + PA+ I + ++++ CP + G
Sbjct: 25 TTIHQPGYCAFYDECGKNPELSGSLMTLSNVSCLSNTPARKITGDHLILLQKICPRLYTG 84
Query: 446 G--YSCCNYEQLNQLKVNIALAENLLGRCPTCFQNFLKPICGMACAVDQSKYLKPVKTEQ 619
+CC+ +QL L+ ++++ + LL RCP C NF+ C C+ +QS ++ + Q
Sbjct: 85 PNTQACCSAKQLVSLEASLSITKALLTRCPACSDNFVNLHCHNTCSPNQSLFINVTRVAQ 144
>AY515256-1|AAS56939.1| 1332|Homo sapiens NPC1L1 splice variant
protein.
Length = 1332
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Frame = +2
Query: 287 SALAEDGHCIWYGVCANSTEHK-------MVNCFYDGPAKPIEEKAMKIIEQYCPEIAKG 445
+ + + G+C +Y C + E V+C + PA+ I + ++++ CP + G
Sbjct: 25 TTIHQPGYCAFYDECGKNPELSGSLMTLSNVSCLSNTPARKITGDHLILLQKICPRLYTG 84
Query: 446 G--YSCCNYEQLNQLKVNIALAENLLGRCPTCFQNFLKPICGMACAVDQSKYLKPVKTEQ 619
+CC+ +QL L+ ++++ + LL RCP C NF+ C C+ +QS ++ + Q
Sbjct: 85 PNTQACCSAKQLVSLEASLSITKALLTRCPACSDNFVNLHCHNTCSPNQSLFINVTRVAQ 144
>AY437865-1|AAR97886.1| 1332|Homo sapiens Niemann-Pick C1-like 1
protein.
Length = 1332
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Frame = +2
Query: 287 SALAEDGHCIWYGVCANSTEHK-------MVNCFYDGPAKPIEEKAMKIIEQYCPEIAKG 445
+ + + G+C +Y C + E V+C + PA+ I + ++++ CP + G
Sbjct: 25 TTIHQPGYCAFYDECGKNPELSGSLMTLSNVSCLSNTPARKITGDHLILLQKICPRLYTG 84
Query: 446 G--YSCCNYEQLNQLKVNIALAENLLGRCPTCFQNFLKPICGMACAVDQSKYLKPVKTEQ 619
+CC+ +QL L+ ++++ + LL RCP C NF+ C C+ +QS ++ + Q
Sbjct: 85 PNTQACCSAKQLVSLEASLSITKALLTRCPACSDNFVNLHCHNTCSPNQSLFINVTRVAQ 144
>AF192523-1|AAF20397.1| 724|Homo sapiens truncated Niemann-Pick
C1-like protein 1 protein.
Length = 724
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Frame = +2
Query: 287 SALAEDGHCIWYGVCANSTEHK-------MVNCFYDGPAKPIEEKAMKIIEQYCPEIAKG 445
+ + + G+C +Y C + E V+C + PA+ I + ++++ CP + G
Sbjct: 25 TTIHQPGYCAFYDECGKNPELSGSLMTLSNVSCLSNTPARKITGDHLILLQKICPRLYTG 84
Query: 446 G--YSCCNYEQLNQLKVNIALAENLLGRCPTCFQNFLKPICGMACAVDQSKYLKPVKTEQ 619
+CC+ +QL L+ ++++ + LL RCP C NF+ C C+ +QS ++ + Q
Sbjct: 85 PNTQACCSAKQLVSLEASLSITKALLTRCPACSDNFVNLHCHNTCSPNQSLFINVTRVAQ 144
>AF192522-1|AAF20396.1| 1359|Homo sapiens Niemann-Pick C1-like
protein 1 protein.
Length = 1359
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Frame = +2
Query: 287 SALAEDGHCIWYGVCANSTEHK-------MVNCFYDGPAKPIEEKAMKIIEQYCPEIAKG 445
+ + + G+C +Y C + E V+C + PA+ I + ++++ CP + G
Sbjct: 25 TTIHQPGYCAFYDECGKNPELSGSLMTLSNVSCLSNTPARKITGDHLILLQKICPRLYTG 84
Query: 446 G--YSCCNYEQLNQLKVNIALAENLLGRCPTCFQNFLKPICGMACAVDQSKYLKPVKTEQ 619
+CC+ +QL L+ ++++ + LL RCP C NF+ C C+ +QS ++ + Q
Sbjct: 85 PNTQACCSAKQLVSLEASLSITKALLTRCPACSDNFVNLHCHNTCSPNQSLFINVTRVAQ 144
>BC130279-1|AAI30280.1| 1195|Homo sapiens immunoglobulin
superfamily, member 3 protein.
Length = 1195
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 524 ISPANFPQGRYSL*AGSVVRNCSTNNLLWLSRDNIAQ 414
+ A PQGR+S+ V R +N++WL RD Q
Sbjct: 434 VRTAGRPQGRFSVIWQLVDRQNRRSNIMWLDRDGTVQ 470
>BC110651-1|AAI10652.1| 1195|Homo sapiens immunoglobulin
superfamily, member 3 protein.
Length = 1195
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 524 ISPANFPQGRYSL*AGSVVRNCSTNNLLWLSRDNIAQ 414
+ A PQGR+S+ V R +N++WL RD Q
Sbjct: 434 VRTAGRPQGRFSVIWQLVDRQNRRSNIMWLDRDGTVQ 470
>AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-P protein.
Length = 1472
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1106 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1140
>AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-O protein.
Length = 1398
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1032 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1066
>AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-N protein.
Length = 1398
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1032 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1066
>AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-M protein.
Length = 1398
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1032 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1066
>AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-L protein.
Length = 1398
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1032 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1066
>AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-K protein.
Length = 1472
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1106 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1140
>AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-I protein.
Length = 1472
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1106 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1140
>AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-H protein.
Length = 1472
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1106 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1140
>AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-G protein.
Length = 1398
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1032 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1066
>AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-F protein.
Length = 1398
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1032 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1066
>AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-E protein.
Length = 1398
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1032 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1066
>AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-D protein.
Length = 1398
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1032 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1066
>AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-C protein.
Length = 1398
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1032 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1066
>AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-B protein.
Length = 1631
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1265 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1299
>AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-A protein.
Length = 1802
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1436 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1470
>AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1436 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1470
>AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1436 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1470
>AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 599 SSICSDRRRRPFHRSASKSSESTSGISPANFPQGR 495
S+I S +RRRP +R +SS S+ S A P+G+
Sbjct: 1436 SAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGK 1470
>AL356748-2|CAI22421.1| 1194|Homo sapiens immunoglobulin
superfamily, member 3 protein.
Length = 1194
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 524 ISPANFPQGRYSL*AGSVVRNCSTNNLLWLSRDNIAQ 414
+ A PQGR+S+ V R +N++WL RD Q
Sbjct: 434 VRTAGRPQGRFSVIWQLVDRQNRRSNIMWLDRDGTVQ 470
>AL356748-1|CAI22422.1| 1214|Homo sapiens immunoglobulin
superfamily, member 3 protein.
Length = 1214
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 524 ISPANFPQGRYSL*AGSVVRNCSTNNLLWLSRDNIAQ 414
+ A PQGR+S+ V R +N++WL RD Q
Sbjct: 454 VRTAGRPQGRFSVIWQLVDRQNRRSNIMWLDRDGTVQ 490
>AL355794-5|CAI22766.1| 1194|Homo sapiens immunoglobulin
superfamily, member 3 protein.
Length = 1194
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 524 ISPANFPQGRYSL*AGSVVRNCSTNNLLWLSRDNIAQ 414
+ A PQGR+S+ V R +N++WL RD Q
Sbjct: 434 VRTAGRPQGRFSVIWQLVDRQNRRSNIMWLDRDGTVQ 470
>AL355794-4|CAI22765.1| 1214|Homo sapiens immunoglobulin
superfamily, member 3 protein.
Length = 1214
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 524 ISPANFPQGRYSL*AGSVVRNCSTNNLLWLSRDNIAQ 414
+ A PQGR+S+ V R +N++WL RD Q
Sbjct: 454 VRTAGRPQGRFSVIWQLVDRQNRRSNIMWLDRDGTVQ 490
>AK097809-1|BAC05175.1| 657|Homo sapiens protein.
Length = 657
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 524 ISPANFPQGRYSL*AGSVVRNCSTNNLLWLSRDNIAQ 414
+ A PQGR+S+ V R +N++WL RD Q
Sbjct: 107 VRTAGRPQGRFSVIWQLVDRQNRRSNIMWLDRDGTVQ 143
>AF031174-1|AAC72013.1| 1215|Homo sapiens Ig-like membrane protein
protein.
Length = 1215
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 524 ISPANFPQGRYSL*AGSVVRNCSTNNLLWLSRDNIAQ 414
+ A PQGR+S+ V R +N++WL RD Q
Sbjct: 454 VRTAGRPQGRFSVIWQLVDRQNRRSNIMWLDRDGTVQ 490
>AB007935-1|BAA32311.2| 1214|Homo sapiens KIAA0466 protein protein.
Length = 1214
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 524 ISPANFPQGRYSL*AGSVVRNCSTNNLLWLSRDNIAQ 414
+ A PQGR+S+ V R +N++WL RD Q
Sbjct: 454 VRTAGRPQGRFSVIWQLVDRQNRRSNIMWLDRDGTVQ 490
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,853,274
Number of Sequences: 237096
Number of extensions: 1889697
Number of successful extensions: 4387
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 4253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4377
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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