Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_I21
(502 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 106 4e-23
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 106 4e-23
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 106 4e-23
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 106 4e-23
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 106 4e-23
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 106 4e-23
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 106 4e-23
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 106 4e-23
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 106 4e-23
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 105 9e-23
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 104 2e-22
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 104 2e-22
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 104 2e-22
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 104 2e-22
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 104 2e-22
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 104 2e-22
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 104 2e-22
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 104 2e-22
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 104 2e-22
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 104 2e-22
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 104 2e-22
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 104 2e-22
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 104 2e-22
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 104 2e-22
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 104 2e-22
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 104 2e-22
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 104 2e-22
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 103 3e-22
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 103 3e-22
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 103 3e-22
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 103 3e-22
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 99 1e-20
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 95 2e-19
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 48 2e-05
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 48 2e-05
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 48 2e-05
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 48 2e-05
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 48 2e-05
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 48 2e-05
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 48 2e-05
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 48 2e-05
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 48 2e-05
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 46 7e-05
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 46 7e-05
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 46 7e-05
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 46 7e-05
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 3.0
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 31 3.0
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 31 3.0
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 3.0
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 3.0
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 3.0
J00112-1|AAA52291.1| 60|Homo sapiens pro-alpha-1 collagen type... 29 6.9
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 106 bits (255), Expect = 4e-23
Identities = 52/73 (71%), Positives = 58/73 (79%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAA
Sbjct: 113 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172
Query: 461 DKRRGYHRQYFPR 499
D+RR Y R Y+ R
Sbjct: 173 DRRR-YRRGYYGR 184
Score = 55.6 bits (128), Expect = 9e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
V+A KV GTVKWFNV++GYGFINRNDTK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTK 113
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 106 bits (255), Expect = 4e-23
Identities = 52/73 (71%), Positives = 58/73 (79%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAA
Sbjct: 113 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172
Query: 461 DKRRGYHRQYFPR 499
D+RR Y R Y+ R
Sbjct: 173 DRRR-YRRGYYGR 184
Score = 55.6 bits (128), Expect = 9e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
V+A KV GTVKWFNV++GYGFINRNDTK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTK 113
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 106 bits (255), Expect = 4e-23
Identities = 52/73 (71%), Positives = 58/73 (79%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAA
Sbjct: 183 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 242
Query: 461 DKRRGYHRQYFPR 499
D+RR Y R Y+ R
Sbjct: 243 DRRR-YRRGYYGR 254
Score = 55.6 bits (128), Expect = 9e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
V+A KV GTVKWFNV++GYGFINRNDTK
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTK 183
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 106 bits (255), Expect = 4e-23
Identities = 52/73 (71%), Positives = 58/73 (79%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAA
Sbjct: 113 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172
Query: 461 DKRRGYHRQYFPR 499
D+RR Y R Y+ R
Sbjct: 173 DRRR-YRRGYYGR 184
Score = 55.6 bits (128), Expect = 9e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
V+A KV GTVKWFNV++GYGFINRNDTK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTK 113
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 106 bits (255), Expect = 4e-23
Identities = 52/73 (71%), Positives = 58/73 (79%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAA
Sbjct: 113 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172
Query: 461 DKRRGYHRQYFPR 499
D+RR Y R Y+ R
Sbjct: 173 DRRR-YRRGYYGR 184
Score = 55.6 bits (128), Expect = 9e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
V+A KV GTVKWFNV++GYGFINRNDTK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTK 113
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 106 bits (255), Expect = 4e-23
Identities = 52/73 (71%), Positives = 58/73 (79%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAA
Sbjct: 113 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172
Query: 461 DKRRGYHRQYFPR 499
D+RR Y R Y+ R
Sbjct: 173 DRRR-YRRGYYGR 184
Score = 55.6 bits (128), Expect = 9e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
V+A KV GTVKWFNV++GYGFINRNDTK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTK 113
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 106 bits (255), Expect = 4e-23
Identities = 52/73 (71%), Positives = 58/73 (79%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAA
Sbjct: 113 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172
Query: 461 DKRRGYHRQYFPR 499
D+RR Y R Y+ R
Sbjct: 173 DRRR-YRRGYYGR 184
Score = 55.6 bits (128), Expect = 9e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
V+A KV GTVKWFNV++GYGFINRNDTK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTK 113
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 106 bits (255), Expect = 4e-23
Identities = 52/73 (71%), Positives = 58/73 (79%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAA
Sbjct: 113 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172
Query: 461 DKRRGYHRQYFPR 499
D+RR Y R Y+ R
Sbjct: 173 DRRR-YRRGYYGR 184
Score = 55.6 bits (128), Expect = 9e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
V+A KV GTVKWFNV++GYGFINRNDTK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTK 113
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 106 bits (255), Expect = 4e-23
Identities = 52/73 (71%), Positives = 58/73 (79%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAA
Sbjct: 46 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 105
Query: 461 DKRRGYHRQYFPR 499
D+RR Y R Y+ R
Sbjct: 106 DRRR-YRRGYYGR 117
Score = 55.6 bits (128), Expect = 9e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
V+A KV GTVKWFNV++GYGFINRNDTK
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTK 46
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 105 bits (252), Expect = 9e-23
Identities = 51/73 (69%), Positives = 58/73 (79%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RS+GDGE VEF VV GEKG EAA VTGP G PV+GS YAA
Sbjct: 113 KEDVFVHQTAIKKNNPRKYLRSLGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172
Query: 461 DKRRGYHRQYFPR 499
D+RR Y R Y+ R
Sbjct: 173 DRRR-YRRGYYGR 184
Score = 55.6 bits (128), Expect = 9e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
V+A KV GTVKWFNV++GYGFINRNDTK
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTK 113
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 80 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 139
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 140 D--RNHYRRY-PR 149
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTK 80
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 78 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 137
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 138 D--RNHYRRY-PR 147
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTK 78
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 121 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 180
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 181 D--RNHYRRY-PR 190
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTK 121
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 104 bits (249), Expect = 2e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 103 bits (248), Expect = 3e-22
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGEEAANVTGPGGVPVQGSKYAA 140
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 141 D--RNHYRRY-PR 150
Score = 56.4 bits (130), Expect = 5e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFINRNDTK
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTK 81
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 103 bits (248), Expect = 3e-22
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA
Sbjct: 116 KEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAP 175
Query: 461 DKRRGYHRQYFPR 499
++R+ R++ PR
Sbjct: 176 NRRKS--RRFIPR 186
Score = 53.2 bits (122), Expect = 5e-07
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
V+A +V GTVKWFNV++GYGFINRNDTK
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTK 116
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 103 bits (248), Expect = 3e-22
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA
Sbjct: 116 KEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAP 175
Query: 461 DKRRGYHRQYFPR 499
++R+ R++ PR
Sbjct: 176 NRRKS--RRFIPR 186
Score = 53.2 bits (122), Expect = 5e-07
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
V+A +V GTVKWFNV++GYGFINRNDTK
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTK 116
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 103 bits (248), Expect = 3e-22
Identities = 50/73 (68%), Positives = 57/73 (78%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVHQTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA
Sbjct: 116 KEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAP 175
Query: 461 DKRRGYHRQYFPR 499
++R+ R++ PR
Sbjct: 176 NRRKS--RRFIPR 186
Score = 53.2 bits (122), Expect = 5e-07
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
V+A +V GTVKWFNV++GYGFINRNDTK
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTK 116
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 98.7 bits (235), Expect = 1e-20
Identities = 49/73 (67%), Positives = 57/73 (78%)
Frame = +2
Query: 281 RXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 460
+ DVFVH TA +NNPRK +RSVGDGE VEF VV GEKG +AA VTGPGG PV+GS YAA
Sbjct: 77 KEDVFVHHTAXKKNNPRKYLRSVGDGEXVEFDVVEGEKGAKAANVTGPGGVPVQGSKYAA 136
Query: 461 DKRRGYHRQYFPR 499
D R ++R+Y PR
Sbjct: 137 D--RNHYRRY-PR 146
Score = 54.4 bits (125), Expect = 2e-07
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 199 VIAEKVSGTVKWFNVKSGYGFINRNDTK 282
VIA KV GTVKWFNV++GYGFI+RNDTK
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTK 77
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 94.7 bits (225), Expect = 2e-19
Identities = 46/70 (65%), Positives = 54/70 (77%)
Frame = +2
Query: 290 VFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 469
+F +QTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA ++R
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 82
Query: 470 RGYHRQYFPR 499
+ R++ PR
Sbjct: 83 KS--RRFIPR 90
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 47.6 bits (108), Expect = 2e-05
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2
Query: 287 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 448
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 61 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 217 SGTVKWFNVKSGYGFIN 267
+G KWFNV+ G+GFI+
Sbjct: 31 TGHCKWFNVRMGFGFIS 47
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 47.6 bits (108), Expect = 2e-05
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2
Query: 287 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 448
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 61 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 217 SGTVKWFNVKSGYGFIN 267
+G KWFNV+ G+GFI+
Sbjct: 31 TGHCKWFNVRMGFGFIS 47
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 47.6 bits (108), Expect = 2e-05
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2
Query: 287 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 448
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 38 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 217 SGTVKWFNVKSGYGFIN 267
+G KWFNV+ G+GFI+
Sbjct: 8 TGHCKWFNVRMGFGFIS 24
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 47.6 bits (108), Expect = 2e-05
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2
Query: 287 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 448
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 38 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 217 SGTVKWFNVKSGYGFIN 267
+G KWFNV+ G+GFI+
Sbjct: 8 TGHCKWFNVRMGFGFIS 24
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 47.6 bits (108), Expect = 2e-05
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2
Query: 287 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 448
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 38 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 217 SGTVKWFNVKSGYGFIN 267
+G KWFNV+ G+GFI+
Sbjct: 8 TGHCKWFNVRMGFGFIS 24
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 47.6 bits (108), Expect = 2e-05
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2
Query: 287 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 448
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 38 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 217 SGTVKWFNVKSGYGFIN 267
+G KWFNV+ G+GFI+
Sbjct: 8 TGHCKWFNVRMGFGFIS 24
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 47.6 bits (108), Expect = 2e-05
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2
Query: 287 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 448
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 38 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 217 SGTVKWFNVKSGYGFIN 267
+G KWFNV+ G+GFI+
Sbjct: 8 TGHCKWFNVRMGFGFIS 24
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 47.6 bits (108), Expect = 2e-05
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2
Query: 287 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 448
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 61 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 217 SGTVKWFNVKSGYGFIN 267
+G KWFNV+ G+GFI+
Sbjct: 31 TGHCKWFNVRMGFGFIS 47
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 47.6 bits (108), Expect = 2e-05
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2
Query: 287 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 448
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 61 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 217 SGTVKWFNVKSGYGFIN 267
+G KWFNV+ G+GFI+
Sbjct: 31 TGHCKWFNVRMGFGFIS 47
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 46.0 bits (104), Expect = 7e-05
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +2
Query: 260 SSTGMTPRXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGG 430
+ + P DVFVHQ+ + + RS+ +GEAVEF KG E+ VTGPGG
Sbjct: 62 AGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGG 114
Score = 29.1 bits (62), Expect = 9.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 217 SGTVKWFNVKSGYGFIN 267
+G KWFNV+ G+GF++
Sbjct: 41 AGICKWFNVRMGFGFLS 57
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 46.0 bits (104), Expect = 7e-05
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +2
Query: 260 SSTGMTPRXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGG 430
+ + P DVFVHQ+ + + RS+ +GEAVEF KG E+ VTGPGG
Sbjct: 62 AGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGG 114
Score = 29.1 bits (62), Expect = 9.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 217 SGTVKWFNVKSGYGFIN 267
+G KWFNV+ G+GF++
Sbjct: 41 AGICKWFNVRMGFGFLS 57
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 46.0 bits (104), Expect = 7e-05
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +2
Query: 260 SSTGMTPRXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGG 430
+ + P DVFVHQ+ + + RS+ +GEAVEF KG E+ VTGPGG
Sbjct: 62 AGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGG 114
Score = 29.1 bits (62), Expect = 9.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 217 SGTVKWFNVKSGYGFIN 267
+G KWFNV+ G+GF++
Sbjct: 41 AGICKWFNVRMGFGFLS 57
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 46.0 bits (104), Expect = 7e-05
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +2
Query: 260 SSTGMTPRXDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGG 430
+ + P DVFVHQ+ + + RS+ +GEAVEF KG E+ VTGPGG
Sbjct: 62 AGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGG 114
Score = 29.1 bits (62), Expect = 9.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 217 SGTVKWFNVKSGYGFIN 267
+G KWFNV+ G+GF++
Sbjct: 41 AGICKWFNVRMGFGFLS 57
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 386 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 475
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 386 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 475
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 386 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 475
GE+GF G+ GP GEP K P A RG
Sbjct: 544 GERGFP--GLPGPSGEPGKQGPSGASGERG 571
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 386 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 475
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 386 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 475
GE+GF G+ GP GEP K P A RG
Sbjct: 965 GERGFP--GLPGPSGEPGKQGPSGASGERG 992
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 386 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 475
GE+GF G+ GP GEP K P A RG
Sbjct: 971 GERGFP--GLPGPSGEPGKQGPSGASGERG 998
>J00112-1|AAA52291.1| 60|Homo sapiens pro-alpha-1 collagen type 1
protein.
Length = 60
Score = 29.5 bits (63), Expect = 6.9
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2
Query: 386 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 475
GE+GF G GP GEP K P A RG
Sbjct: 4 GERGFP--GPLGPSGEPGKQGPSGASGERG 31
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,497,304
Number of Sequences: 237096
Number of extensions: 1210896
Number of successful extensions: 3838
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 3542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3834
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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