Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_I15
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1195 + 26906814-26907121,26907771-26907992,26908913-269091...    31   0.61 
10_07_0186 - 13912973-13913015,13913467-13913773,13913983-139140...    29   3.2  
01_01_0771 - 5982826-5983327,5983424-5984772                           29   3.2  
07_01_0313 + 2216498-2216953                                           28   7.5  
12_01_0684 + 5828947-5829012,5831123-5832103,5832200-5832326,583...    27   9.9  
07_03_0515 + 18992296-18993720                                         27   9.9  
06_03_1303 + 29180837-29181205,29181289-29181306,29181337-291816...    27   9.9  

>12_02_1195 +
           26906814-26907121,26907771-26907992,26908913-26909153,
           26909512-26909642,26910336-26910474,26910600-26910810,
           26911371-26911759
          Length = 546

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = +1

Query: 361 LPAVRGASPPTSMDLDVLIPQWKA-VPVVAMKPTFSIPTISCLSTLHIT--ET*VEQRVA 531
           LPAV     PT      + P + A VP++     FS P +S   TL I   ET     + 
Sbjct: 214 LPAVTSPDDPTLQTTYTISPSYMAYVPILFQPAFFSFPLVSISQTLSIKYGETNRVVNLL 273

Query: 532 WEWQQ 546
            +WQQ
Sbjct: 274 GKWQQ 278


>10_07_0186 -
           13912973-13913015,13913467-13913773,13913983-13914043,
           13914124-13914299,13914393-13914450,13914709-13914776,
           13915591-13915666,13916523-13916627,13916711-13916768,
           13916874-13917031
          Length = 369

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 373 RGASPPTSMDLDVLIPQWKAVPVVAMKPTFSIPT 474
           +GAS     D +VL PQW AV   A  P + + T
Sbjct: 307 QGASTDGCEDENVLCPQWAAVGECAKNPNYMVGT 340


>01_01_0771 - 5982826-5983327,5983424-5984772
          Length = 616

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
 Frame = +1

Query: 316 RILARVKRPVANALGLPAVRGASPPTSMDLDVLIPQWKA--------VPVVAMKPTFSIP 471
           R++A +   + ++ G+ A  GA+P   +   VL+P W A        VP       + +P
Sbjct: 464 RLVALLSVVIGSSAGIAAYWGAAPERWVGYTVLVPAWAAGTLGIQLLVPAARAPKVWGVP 523

Query: 472 TISCLSTLHI 501
            +  L +L I
Sbjct: 524 LVPWLPSLSI 533


>07_01_0313 + 2216498-2216953
          Length = 151

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +1

Query: 346 ANALGLPAVRGASPPTSMDL--DVLIPQWKAVPVVAMKPTFSIPTISCLS 489
           A A  +PAV     PT   +   V +P   AVP V + P  +IPT+  ++
Sbjct: 38  APAAAIPAVPAMPKPTIPTIVPAVTLPPIPAVPKVTLPPMPAIPTVPAVT 87


>12_01_0684 +
           5828947-5829012,5831123-5832103,5832200-5832326,
           5832623-5832705,5832752-5832917,5833337-5833399,
           5833624-5833733,5834227-5834276,5834528-5834664,
           5835180-5835281,5835871-5835988,5836575-5836627,
           5836710-5836813,5836910-5836972,5837375-5837503,
           5837508-5837605,5838446-5838500,5839260-5839311,
           5839996-5840113,5841906-5842035,5842156-5842437
          Length = 1028

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +3

Query: 432 GTGGCDEAYIFNPDNQLFVDPAYNRDLSRAKGRM 533
           G  G DEA     D+QLF D    + LS+AK RM
Sbjct: 438 GGAGDDEASTLLQDHQLFSD-MLQQQLSKAKNRM 470


>07_03_0515 + 18992296-18993720
          Length = 474

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 358 GLPAVRGASPPTSMDLDVLIPQ 423
           G PA  G+  PT  DLD L+P+
Sbjct: 308 GAPAAGGSMNPTDADLDELLPE 329


>06_03_1303 +
           29180837-29181205,29181289-29181306,29181337-29181622,
           29185008-29186284,29186499-29187005
          Length = 818

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -2

Query: 355 AHSLQVVLLEQGFWASSCSACCVKHTTNRLAHTLASNKLVRF 230
           AH+  V  L  G W S CS   VK    R + ++A + LV F
Sbjct: 364 AHAFSVWSLVHGDWLSWCSVMLVKR--RRWSASMAQSNLVTF 403


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,713,787
Number of Sequences: 37544
Number of extensions: 354301
Number of successful extensions: 1092
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)