Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_I10
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.1  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   4.8  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 13/65 (20%), Positives = 25/65 (38%)
 Frame = -1

Query: 497  FSQAKSSNLLISSFYLIQIHDLTTNPSYEYFRCFEY*SNKMESPIKWRLKVFIDDNSIS* 318
            F   +  N   +   ++  H   T   +  FRC +Y  N   + +  +   +ID+     
Sbjct: 1168 FPDEERLNRASNQIAIVTTHQANTTAQFLVFRCMKYFLNPNVTVLGGQTLAYIDETDRKT 1227

Query: 317  KYVAD 303
             Y+ D
Sbjct: 1228 AYLYD 1232


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 530 FYIPLDYRRTVFSQAKSSNLLISSFYLI 447
           F I +   RTVF +  S  +L+S FY +
Sbjct: 298 FVIKISLFRTVFLRLSSLAVLLSRFYFL 325


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,532
Number of Sequences: 2352
Number of extensions: 9861
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)