Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_I10
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AC025716-22|AAK39613.1|  630|Caenorhabditis elegans Zwilch (dros...    28   6.7  
Z81057-1|CAB02914.2|  460|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AL132948-9|CAC51067.1|  256|Caenorhabditis elegans Hypothetical ...    27   8.8  

>Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.7 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = +1

Query: 112 EILDFKQRIFYLNLIFTLPSLLQHFPVML 198
           EI+ ++Q  F++  ++T+P +   FP++L
Sbjct: 264 EIIGYEQYYFWVVWVYTIPFIAASFPILL 292


>AC025716-22|AAK39613.1|  630|Caenorhabditis elegans Zwilch
           (drosophila) homolog protein1 protein.
          Length = 630

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 52  DCTFKTHRGYGVRFFFIFKSEILDFKQRIFYLNL 153
           DCT K   G+G + FF+   EI  F+Q  F LNL
Sbjct: 277 DCTIKIDLGWGDKRFFV-DDEI--FEQLFFVLNL 307


>Z81057-1|CAB02914.2|  460|Caenorhabditis elegans Hypothetical
           protein F10D11.2 protein.
          Length = 460

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -3

Query: 126 KVQNFRLKNKKKSYPISAMSFKSAV--CPKSESTTVEXKHNG 7
           +   FR++N+ K Y  SA++F S++     S S+T+  +  G
Sbjct: 245 RYNKFRVRNRPKKYKRSAVTFTSSLEAATSSSSSTIPHQDQG 286


>AL132948-9|CAC51067.1|  256|Caenorhabditis elegans Hypothetical
           protein Y39B6A.10 protein.
          Length = 256

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 103 FKSEILDFKQRIFYLNL-IFTLPSLLQHFPVMLF 201
           F+++I      IF   L IFT+PS+L  FP+ LF
Sbjct: 22  FRAKIRHLSAGIFLSWLAIFTIPSILSIFPIGLF 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,113,600
Number of Sequences: 27780
Number of extensions: 208263
Number of successful extensions: 379
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)