Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_I03
         (432 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0328 - 23170019-23170168,23170865-23170903,23171043-231711...    29   1.2  
02_05_1141 - 34388867-34388950,34389139-34389189,34389273-343893...    29   2.1  
01_01_1214 - 9793854-9794003,9795418-9795456,9795604-9795702,979...    27   4.9  

>03_05_0328 - 23170019-23170168,23170865-23170903,23171043-23171141,
            23171214-23171342,23171915-23172061,23172959-23173089,
            23173938-23174157,23174294-23174387,23174469-23174581,
            23174727-23174861,23175231-23175335,23175440-23175544,
            23176240-23176327,23176415-23176536,23176611-23176670,
            23177434-23177529,23177620-23177772,23177865-23177951,
            23179179-23179246,23179603-23179726,23180235-23180330,
            23180430-23180539,23180647-23180761,23181622-23181699,
            23181843-23181908,23182203-23182363,23182781-23183099
          Length = 1069

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -1

Query: 378  KLEXPYPKTHIXLILKVSTTIYRYILLS*SNHIPTVIETILSIFV*SITTINNYL 214
            K+    P + I    K+S   Y YI +  SNHI  V+    + FV  ++T+ + L
Sbjct: 867  KMSLSVPLSDILAFKKLSKAFYGYIEVLFSNHITFVLNLDTNTFVHIVSTLESGL 921


>02_05_1141 -
           34388867-34388950,34389139-34389189,34389273-34389384,
           34390302-34390489
          Length = 144

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +1

Query: 73  STQKFAKLKQSNKY-RVLIFIKKQKCNCKV 159
           ST++F+ LK+ N+  +  I I KQ+CNC V
Sbjct: 108 STKRFSLLKKDNEVLKRQIQIMKQQCNCTV 137


>01_01_1214 -
           9793854-9794003,9795418-9795456,9795604-9795702,
           9795779-9795907,9796473-9796619,9797513-9797643,
           9798497-9798716,9798858-9798951,9799021-9799133,
           9799799-9799903,9800008-9800112,9800762-9800849,
           9800933-9801054,9801130-9801189,9802313-9802408,
           9802506-9802658,9802752-9802838,9803995-9804062,
           9804429-9804552,9805057-9805152,9805250-9805359,
           9805459-9805573,9806877-9806942,9807260-9807420,
           9807927-9808167
          Length = 972

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -1

Query: 378 KLEXPYPKTHIXLILKVSTTIYRYILLS*SNHIPTVIETILSIFV*SITTINNYL 214
           K+    P + I    K+S   Y YI +  S+HI  V+    + FV  ++T+ + L
Sbjct: 770 KMSLSVPLSDILAFKKLSKAFYGYIEVLFSSHITFVLNLDTNTFVHIVSTLESGL 824


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,968,043
Number of Sequences: 37544
Number of extensions: 140151
Number of successful extensions: 310
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 814473264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)