Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_I01
         (582 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666...   149   1e-36
12_02_0656 + 21601782-21601925,21602249-21602460,21602686-216028...    33   0.22 
05_04_0322 + 20239793-20240127,20240176-20240728,20241317-202414...    29   2.0  
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159...    29   2.7  
08_01_0346 - 3063440-3064189                                           28   4.7  
11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090     27   8.2  

>07_03_1220 -
           24966169-24966327,24966421-24966552,24966639-24966693,
           24967496-24967667,24967771-24967918,24968015-24968050
          Length = 233

 Score =  149 bits (362), Expect = 1e-36
 Identities = 70/93 (75%), Positives = 77/93 (82%)
 Frame = +3

Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
           + +  F  PE  VELYAEKV  RGLCAIAQAESLRY L+GGLAVRRACYGVLRF+MESGA
Sbjct: 74  VVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGA 133

Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
           +GCEV+VSGKLR  RAKSMKF DG MI SG P+
Sbjct: 134 KGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPV 166



 Score =  112 bits (269), Expect = 2e-25
 Identities = 85/189 (44%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
 Frame = +1

Query: 28  MACEQYCKRTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSV 207
           MA      + RKFV  GVF AELNE LT ELAEDGYSGVEVRVTP+R+EIII AT T +V
Sbjct: 1   MATHTQISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNV 60

Query: 208 LXEKGRXIRELTSVLQNRISXFQSNL*NCMLK---RWLLVVF-ALSPRPNL*DTXLSEVS 375
           L EKGR IRELTSV+Q R +  ++ +     K   R L  +  A S R  L        +
Sbjct: 61  LGEKGRRIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRA 120

Query: 376 LYVVLAMVFSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATX 555
            Y VL  V   S      V+V     A     +  +    + S    G P N Y+++A  
Sbjct: 121 CYGVLRFVME-SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISS----GYPVNLYIDSAVR 175

Query: 556 HVLLRQGVL 582
           HVLLRQGVL
Sbjct: 176 HVLLRQGVL 184


>12_02_0656 +
           21601782-21601925,21602249-21602460,21602686-21602813,
           21602905-21602986,21603308-21603406,21603619-21604054,
           21604280-21604350,21604438-21604523,21604740-21604750
          Length = 422

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = +2

Query: 476 QINEVCRW-THDPLWETLAMITSTLLPXMCFS 568
           Q + VCRW  + P+ ET+++I+S +L  +CFS
Sbjct: 167 QGSTVCRWYPNAPIQETISLISSAILYFLCFS 198


>05_04_0322 +
           20239793-20240127,20240176-20240728,20241317-20241425,
           20244456-20244723,20244943-20245197,20245594-20246539
          Length = 821

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 305 GGYSWSLRYRPG-RISKIQXYRRSRCTSCLLWC 400
           G  SWS RY+    ISK   Y   RC  C++ C
Sbjct: 665 GALSWSRRYQIAIGISKGLPYLHERCRDCIIHC 697


>07_01_0214 +
           1595917-1596526,1597127-1597140,1598414-1598743,
           1598853-1598963,1599113-1599269,1603366-1603619,
           1603762-1603960,1604341-1604498
          Length = 610

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/35 (45%), Positives = 16/35 (45%)
 Frame = -1

Query: 489 TSLIWHVDHAACQIQQLHNHGHQIP**NGEHHSKH 385
           T L  H   AA    Q H HGH      G HHSKH
Sbjct: 247 TPLALHQAAAAAGPSQYHGHGHPHH-GGGHHHSKH 280


>08_01_0346 - 3063440-3064189
          Length = 249

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 339 AESLRYXLIGGLAVRRACYGVLR 407
           A S    L+GG A   ACYGVLR
Sbjct: 221 ARSAARVLLGGWAAMAACYGVLR 243


>11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090
          Length = 1037

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 528 ARVSQSGS*VHLQTSLIWHVDHAACQIQQLHNHGH 424
           + + QSG+       LIWH+  + C+I+    H H
Sbjct: 750 SEIIQSGAPRCSHVILIWHIATSLCEIKLAQEHDH 784


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,964,695
Number of Sequences: 37544
Number of extensions: 282870
Number of successful extensions: 693
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)