Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_I01
(582 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 166 6e-41
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 166 6e-41
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 166 6e-41
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 166 6e-41
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 166 6e-41
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 166 6e-41
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 166 6e-41
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 166 6e-41
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 166 6e-41
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 166 6e-41
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 166 6e-41
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 166 6e-41
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 166 6e-41
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 164 2e-40
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 164 2e-40
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 153 6e-37
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 109 7e-24
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 109 7e-24
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 74 3e-13
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 166 bits (403), Expect = 6e-41
Identities = 79/93 (84%), Positives = 84/93 (90%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 72 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 132 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 164
Score = 119 bits (287), Expect = 7e-27
Identities = 85/181 (46%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 232 RELTSVLQNRISXFQSNL---*NCMLKRWLLVVF-ALSPRPNL*DTXLSEVSLYVVLAMV 399
RELT+V+Q R + ++ + R L + A S R L + Y VL +
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 400 FSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATXHVLLRQGV 579
S VVV + L + S GDP N YV+TA HVLLRQGV
Sbjct: 127 ME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS----GDPVNYYVDTAVRHVLLRQGV 181
Query: 580 L 582
L
Sbjct: 182 L 182
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 166 bits (403), Expect = 6e-41
Identities = 79/93 (84%), Positives = 84/93 (90%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 72 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 132 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 164
Score = 119 bits (287), Expect = 7e-27
Identities = 85/181 (46%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 232 RELTSVLQNRISXFQSNL---*NCMLKRWLLVVF-ALSPRPNL*DTXLSEVSLYVVLAMV 399
RELT+V+Q R + ++ + R L + A S R L + Y VL +
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 400 FSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATXHVLLRQGV 579
S VVV + L + S GDP N YV+TA HVLLRQGV
Sbjct: 127 ME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS----GDPVNYYVDTAVRHVLLRQGV 181
Query: 580 L 582
L
Sbjct: 182 L 182
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 166 bits (403), Expect = 6e-41
Identities = 79/93 (84%), Positives = 84/93 (90%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 72 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 132 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 164
Score = 119 bits (287), Expect = 7e-27
Identities = 85/181 (46%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 232 RELTSVLQNRISXFQSNL---*NCMLKRWLLVVF-ALSPRPNL*DTXLSEVSLYVVLAMV 399
RELT+V+Q R + ++ + R L + A S R L + Y VL +
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 400 FSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATXHVLLRQGV 579
S VVV + L + S GDP N YV+TA HVLLRQGV
Sbjct: 127 ME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS----GDPVNYYVDTAVRHVLLRQGV 181
Query: 580 L 582
L
Sbjct: 182 L 182
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 166 bits (403), Expect = 6e-41
Identities = 79/93 (84%), Positives = 84/93 (90%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 72 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 132 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 164
Score = 120 bits (288), Expect = 5e-27
Identities = 88/185 (47%), Positives = 104/185 (56%), Gaps = 4/185 (2%)
Frame = +1
Query: 40 QYCKRTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEK 219
Q KR RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EK
Sbjct: 4 QISKR-RKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEK 62
Query: 220 GRXIRELTSVLQNRISXFQSNL---*NCMLKRWLLVVF-ALSPRPNL*DTXLSEVSLYVV 387
GR IRELT+V+Q R + ++ + R L + A S R L + Y V
Sbjct: 63 GRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
Query: 388 LAMVFSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATXHVLL 567
L + S VVV + L + S GDP N YV+TA HVLL
Sbjct: 123 LRFIME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS----GDPVNYYVDTAVRHVLL 177
Query: 568 RQGVL 582
RQGVL
Sbjct: 178 RQGVL 182
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 166 bits (403), Expect = 6e-41
Identities = 79/93 (84%), Positives = 84/93 (90%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 16 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 75
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 76 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 108
Score = 36.7 bits (81), Expect = 0.060
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1
Query: 517 GDPCNDYVNTATXHVLLRQGV 579
GDP N YV+TA HVLLRQGV
Sbjct: 105 GDPVNYYVDTAVRHVLLRQGV 125
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 166 bits (403), Expect = 6e-41
Identities = 79/93 (84%), Positives = 84/93 (90%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 72 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 132 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 164
Score = 119 bits (287), Expect = 7e-27
Identities = 85/181 (46%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 232 RELTSVLQNRISXFQSNL---*NCMLKRWLLVVF-ALSPRPNL*DTXLSEVSLYVVLAMV 399
RELT+V+Q R + ++ + R L + A S R L + Y VL +
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 400 FSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATXHVLLRQGV 579
S VVV + L + S GDP N YV+TA HVLLRQGV
Sbjct: 127 ME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS----GDPVNYYVDTAVRHVLLRQGV 181
Query: 580 L 582
L
Sbjct: 182 L 182
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 166 bits (403), Expect = 6e-41
Identities = 79/93 (84%), Positives = 84/93 (90%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 72 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 132 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 164
Score = 119 bits (287), Expect = 7e-27
Identities = 85/181 (46%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 232 RELTSVLQNRISXFQSNL---*NCMLKRWLLVVF-ALSPRPNL*DTXLSEVSLYVVLAMV 399
RELT+V+Q R + ++ + R L + A S R L + Y VL +
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 400 FSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATXHVLLRQGV 579
S VVV + L + S GDP N YV+TA HVLLRQGV
Sbjct: 127 ME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS----GDPVNYYVDTAVRHVLLRQGV 181
Query: 580 L 582
L
Sbjct: 182 L 182
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 166 bits (403), Expect = 6e-41
Identities = 79/93 (84%), Positives = 84/93 (90%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 72 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 132 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 164
Score = 119 bits (287), Expect = 7e-27
Identities = 85/181 (46%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 232 RELTSVLQNRISXFQSNL---*NCMLKRWLLVVF-ALSPRPNL*DTXLSEVSLYVVLAMV 399
RELT+V+Q R + ++ + R L + A S R L + Y VL +
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 400 FSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATXHVLLRQGV 579
S VVV + L + S GDP N YV+TA HVLLRQGV
Sbjct: 127 ME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS----GDPVNYYVDTAVRHVLLRQGV 181
Query: 580 L 582
L
Sbjct: 182 L 182
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 166 bits (403), Expect = 6e-41
Identities = 79/93 (84%), Positives = 84/93 (90%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 71 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 130
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 131 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 163
Score = 119 bits (287), Expect = 7e-27
Identities = 85/181 (46%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 6 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 65
Query: 232 RELTSVLQNRISXFQSNL---*NCMLKRWLLVVF-ALSPRPNL*DTXLSEVSLYVVLAMV 399
RELT+V+Q R + ++ + R L + A S R L + Y VL +
Sbjct: 66 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 125
Query: 400 FSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATXHVLLRQGV 579
S VVV + L + S GDP N YV+TA HVLLRQGV
Sbjct: 126 ME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS----GDPVNYYVDTAVRHVLLRQGV 180
Query: 580 L 582
L
Sbjct: 181 L 181
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 166 bits (403), Expect = 6e-41
Identities = 79/93 (84%), Positives = 84/93 (90%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 71 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 130
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 131 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 163
Score = 119 bits (287), Expect = 7e-27
Identities = 85/181 (46%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 6 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 65
Query: 232 RELTSVLQNRISXFQSNL---*NCMLKRWLLVVF-ALSPRPNL*DTXLSEVSLYVVLAMV 399
RELT+V+Q R + ++ + R L + A S R L + Y VL +
Sbjct: 66 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 125
Query: 400 FSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATXHVLLRQGV 579
S VVV + L + S GDP N YV+TA HVLLRQGV
Sbjct: 126 ME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS----GDPVNYYVDTAVRHVLLRQGV 180
Query: 580 L 582
L
Sbjct: 181 L 181
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 166 bits (403), Expect = 6e-41
Identities = 79/93 (84%), Positives = 84/93 (90%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 72 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 132 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 164
Score = 119 bits (287), Expect = 7e-27
Identities = 85/181 (46%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 232 RELTSVLQNRISXFQSNL---*NCMLKRWLLVVF-ALSPRPNL*DTXLSEVSLYVVLAMV 399
RELT+V+Q R + ++ + R L + A S R L + Y VL +
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 400 FSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATXHVLLRQGV 579
S VVV + L + S GDP N YV+TA HVLLRQGV
Sbjct: 127 ME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS----GDPVNYYVDTAVRHVLLRQGV 181
Query: 580 L 582
L
Sbjct: 182 L 182
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 166 bits (403), Expect = 6e-41
Identities = 79/93 (84%), Positives = 84/93 (90%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 72 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 132 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 164
Score = 119 bits (287), Expect = 7e-27
Identities = 85/181 (46%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 232 RELTSVLQNRISXFQSNL---*NCMLKRWLLVVF-ALSPRPNL*DTXLSEVSLYVVLAMV 399
RELT+V+Q R + ++ + R L + A S R L + Y VL +
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 400 FSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATXHVLLRQGV 579
S VVV + L + S GDP N YV+TA HVLLRQGV
Sbjct: 127 ME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS----GDPVNYYVDTAVRHVLLRQGV 181
Query: 580 L 582
L
Sbjct: 182 L 182
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 166 bits (403), Expect = 6e-41
Identities = 79/93 (84%), Positives = 84/93 (90%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 72 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 132 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 164
Score = 119 bits (287), Expect = 7e-27
Identities = 85/181 (46%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 232 RELTSVLQNRISXFQSNL---*NCMLKRWLLVVF-ALSPRPNL*DTXLSEVSLYVVLAMV 399
RELT+V+Q R + ++ + R L + A S R L + Y VL +
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 400 FSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATXHVLLRQGV 579
S VVV + L + S GDP N YV+TA HVLLRQGV
Sbjct: 127 ME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS----GDPVNYYVDTAVRHVLLRQGV 181
Query: 580 L 582
L
Sbjct: 182 L 182
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 164 bits (399), Expect = 2e-40
Identities = 78/93 (83%), Positives = 84/93 (90%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAE+VATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 72 VVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 132 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 164
Score = 119 bits (286), Expect = 9e-27
Identities = 83/181 (45%), Positives = 100/181 (55%), Gaps = 4/181 (2%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 232 RELTSVLQNRISXFQSNL----*NCMLKRWLLVVFALSPRPNL*DTXLSEVSLYVVLAMV 399
RELT+V+Q R + ++ + + A S R L + Y VL +
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 400 FSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATXHVLLRQGV 579
S VVV + L + S GDP N YV+TA HVLLRQGV
Sbjct: 127 ME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS----GDPVNYYVDTAVRHVLLRQGV 181
Query: 580 L 582
L
Sbjct: 182 L 182
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 164 bits (398), Expect = 2e-40
Identities = 78/93 (83%), Positives = 83/93 (89%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F PE SVELYAEKVATRGLCAIAQAE LRY L+GGLAVRRACYGVLRFIMESGA
Sbjct: 72 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESGA 131
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 132 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 164
Score = 109 bits (262), Expect = 7e-24
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 232 RELTSVLQNR 261
RELT+V+Q R
Sbjct: 67 RELTAVVQKR 76
Score = 38.3 bits (85), Expect = 0.020
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +1
Query: 517 GDPCNDYVNTATXHVLLRQGVL 582
GDP N YV+TA HVLLRQGVL
Sbjct: 161 GDPVNYYVDTAVRHVLLRQGVL 182
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 153 bits (370), Expect = 6e-37
Identities = 73/79 (92%), Positives = 76/79 (96%)
Frame = +3
Query: 291 LYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGX 470
LYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRG
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 471 RAKSMKFVDGLMIHSGRPL 527
RAKSMKFVDGLMIHSG P+
Sbjct: 61 RAKSMKFVDGLMIHSGDPV 79
Score = 38.3 bits (85), Expect = 0.020
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +1
Query: 517 GDPCNDYVNTATXHVLLRQGVL 582
GDP N YV+TA HVLLRQGVL
Sbjct: 76 GDPVNYYVDTAVRHVLLRQGVL 97
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 109 bits (262), Expect = 7e-24
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 232 RELTSVLQNR 261
RELT+V+Q R
Sbjct: 67 RELTAVVQKR 76
Score = 37.1 bits (82), Expect = 0.045
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRG 320
+ + F PE SVELYAEKVATRG
Sbjct: 72 VVQKRFGFPEGSVELYAEKVATRG 95
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 109 bits (262), Expect = 7e-24
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIII+AT T +VL EKGR I
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 232 RELTSVLQNR 261
RELT+V+Q R
Sbjct: 67 RELTAVVQKR 76
Score = 76.6 bits (180), Expect = 6e-14
Identities = 36/46 (78%), Positives = 39/46 (84%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRR 386
+ + F PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRR
Sbjct: 72 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 74.1 bits (174), Expect = 3e-13
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = +3
Query: 414 MESGARGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRPL 527
MESGA+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P+
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 38
Score = 38.3 bits (85), Expect = 0.020
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +1
Query: 517 GDPCNDYVNTATXHVLLRQGVL 582
GDP N YV+TA HVLLRQGVL
Sbjct: 35 GDPVNYYVDTAVRHVLLRQGVL 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,691,224
Number of Sequences: 237096
Number of extensions: 1501148
Number of successful extensions: 10326
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10326
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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