Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_I01
(582 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal prot... 152 3e-37
BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p pro... 152 3e-37
AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p pro... 152 3e-37
AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA... 152 3e-37
X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal prot... 149 3e-36
AE014134-408|AAF51254.1| 348|Drosophila melanogaster CG18641-PA... 30 2.6
BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p pro... 29 6.1
AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-P... 29 6.1
>L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal protein
S3/AP endonucleaseDNA repair protein protein.
Length = 246
Score = 152 bits (369), Expect = 3e-37
Identities = 73/92 (79%), Positives = 78/92 (84%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F +ELYAEKVA RGLCAIAQAESLRY L GGLAVRRACYGVLR+IMESGA
Sbjct: 74 MVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGA 133
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRP 524
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P
Sbjct: 134 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP 165
Score = 109 bits (261), Expect = 4e-24
Identities = 53/72 (73%), Positives = 60/72 (83%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIIIMAT T VL EKGR I
Sbjct: 9 KKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRI 68
Query: 232 RELTSVLQNRIS 267
RELT+++Q R +
Sbjct: 69 RELTAMVQKRFN 80
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1
Query: 517 GDPCNDYVNTATXHVLLRQGVL 582
GDPCNDYV TAT HVLLRQGVL
Sbjct: 163 GDPCNDYVETATRHVLLRQGVL 184
>BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p
protein.
Length = 253
Score = 152 bits (369), Expect = 3e-37
Identities = 73/92 (79%), Positives = 78/92 (84%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F +ELYAEKVA RGLCAIAQAESLRY L GGLAVRRACYGVLR+IMESGA
Sbjct: 81 MVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGA 140
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRP 524
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P
Sbjct: 141 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP 172
Score = 109 bits (261), Expect = 4e-24
Identities = 53/72 (73%), Positives = 60/72 (83%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIIIMAT T VL EKGR I
Sbjct: 16 KKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRI 75
Query: 232 RELTSVLQNRIS 267
RELT+++Q R +
Sbjct: 76 RELTAMVQKRFN 87
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1
Query: 517 GDPCNDYVNTATXHVLLRQGVL 582
GDPCNDYV TAT HVLLRQGVL
Sbjct: 170 GDPCNDYVETATRHVLLRQGVL 191
>AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p
protein.
Length = 246
Score = 152 bits (369), Expect = 3e-37
Identities = 73/92 (79%), Positives = 78/92 (84%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F +ELYAEKVA RGLCAIAQAESLRY L GGLAVRRACYGVLR+IMESGA
Sbjct: 74 MVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGA 133
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRP 524
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P
Sbjct: 134 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP 165
Score = 109 bits (261), Expect = 4e-24
Identities = 53/72 (73%), Positives = 60/72 (83%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIIIMAT T VL EKGR I
Sbjct: 9 KKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRI 68
Query: 232 RELTSVLQNRIS 267
RELT+++Q R +
Sbjct: 69 RELTAMVQKRFN 80
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1
Query: 517 GDPCNDYVNTATXHVLLRQGVL 582
GDPCNDYV TAT HVLLRQGVL
Sbjct: 163 GDPCNDYVETATRHVLLRQGVL 184
>AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA
protein.
Length = 246
Score = 152 bits (369), Expect = 3e-37
Identities = 73/92 (79%), Positives = 78/92 (84%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F +ELYAEKVA RGLCAIAQAESLRY L GGLAVRRACYGVLR+IMESGA
Sbjct: 74 MVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGA 133
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRP 524
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P
Sbjct: 134 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP 165
Score = 109 bits (261), Expect = 4e-24
Identities = 53/72 (73%), Positives = 60/72 (83%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP R+EIIIMAT T VL EKGR I
Sbjct: 9 KKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRI 68
Query: 232 RELTSVLQNRIS 267
RELT+++Q R +
Sbjct: 69 RELTAMVQKRFN 80
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1
Query: 517 GDPCNDYVNTATXHVLLRQGVL 582
GDPCNDYV TAT HVLLRQGVL
Sbjct: 163 GDPCNDYVETATRHVLLRQGVL 184
>X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal protein
S3 protein.
Length = 246
Score = 149 bits (361), Expect = 3e-36
Identities = 72/92 (78%), Positives = 77/92 (83%)
Frame = +3
Query: 249 ITESNFXIPEQSVELYAEKVATRGLCAIAQAESLRYXLIGGLAVRRACYGVLRFIMESGA 428
+ + F +ELYAEKVA RGLCAIAQAESLRY L G LAVRRACYGVLR+IMESGA
Sbjct: 74 MVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLRYIMESGA 133
Query: 429 RGCEVVVSGKLRGXRAKSMKFVDGLMIHSGRP 524
+GCEVVVSGKLRG RAKSMKFVDGLMIHSG P
Sbjct: 134 KGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP 165
Score = 125 bits (302), Expect = 4e-29
Identities = 85/181 (46%), Positives = 103/181 (56%), Gaps = 4/181 (2%)
Frame = +1
Query: 52 RTRKFVGXGVFKAELNEFLTMELAEDGYSGVEVRVTPIRSEIIIMATXTXSVLXEKGRXI 231
+ RKFV G+FKAELNEFLT ELAEDGYSGVEVRVTP +EIIIMAT T VL EKGR I
Sbjct: 9 KKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQQVLAEKGRRI 68
Query: 232 RELTSVLQNRISXFQSNL*NCMLKRWLLVVFALSPRPNL*DTXLSEVSL----YVVLAMV 399
RELT+++Q R + + K + A++ +L E+++ Y VL +
Sbjct: 69 RELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLRYI 128
Query: 400 FSVSSWNLVPVVVKLLYLASCVVXVPNQ*SL*MDS*STLGDPCNDYVNTATXHVLLRQGV 579
S VVV + L + S GDPCNDYV TAT HVLLRQGV
Sbjct: 129 ME-SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS----GDPCNDYVETATRHVLLRQGV 183
Query: 580 L 582
L
Sbjct: 184 L 184
>AE014134-408|AAF51254.1| 348|Drosophila melanogaster CG18641-PA
protein.
Length = 348
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = -1
Query: 189 GHNNDLRADGSDPHF----HAGVAVLGQLHSEELIEF 91
G NN D +D HF H G +LGQ HS +F
Sbjct: 203 GANNSRDLDSTDAHFVDVLHTGAGILGQWHSSGHADF 239
>BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p protein.
Length = 1654
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 10 RASVAIMACEQYCKRTRKFVGXGVFKAELNEFLTME 117
+AS+ + E Y TRKF+ VFK+ L++ ++M+
Sbjct: 959 QASIFVRPHETYHVTTRKFLEKEVFKSSLSQTISMD 994
>AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-PA
protein.
Length = 1654
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 10 RASVAIMACEQYCKRTRKFVGXGVFKAELNEFLTME 117
+AS+ + E Y TRKF+ VFK+ L++ ++M+
Sbjct: 959 QASIFVRPHETYHVTTRKFLEKEVFKSSLSQTISMD 994
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,647,348
Number of Sequences: 53049
Number of extensions: 474921
Number of successful extensions: 2109
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2109
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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