Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_H21
(613 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141... 48 6e-06
06_02_0283 + 13726047-13726090,13726160-13726266,13726515-137266... 46 3e-05
05_01_0464 - 3670397-3670525,3671152-3671244,3671366-3671537,367... 38 0.006
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 32 0.41
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 2.9
05_04_0443 - 21283680-21283940,21284044-21284118,21284620-212846... 29 3.8
03_02_0875 + 12038365-12039329,12039417-12039593,12039651-120398... 29 3.8
01_06_1827 + 40169001-40169263,40169358-40169472,40170090-401702... 29 3.8
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409... 28 5.1
01_06_1520 - 37950262-37950271,37950639-37950749,37950965-379511... 28 5.1
01_06_0736 - 31585840-31586459,31586545-31587070,31588051-315881... 28 5.1
11_01_0560 - 4413174-4414469 28 6.7
08_01_0686 + 6049563-6050900 28 6.7
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 28 6.7
02_05_1154 + 34506915-34507467,34508334-34508388,34508933-34509038 28 6.7
02_04_0640 - 24664841-24664855,24664895-24664978,24665232-246653... 27 8.9
>05_01_0195 -
1409820-1409966,1410304-1410360,1410774-1410828,
1410902-1411002,1411051-1411205,1411395-1411459,
1411545-1411595,1411817-1411893,1412153-1412262,
1412355-1412403,1412528-1412572,1412689-1412813,
1413087-1413228,1413336-1413446
Length = 429
Score = 48.0 bits (109), Expect = 6e-06
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 6/121 (4%)
Frame = +3
Query: 231 DEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEV-GLMNGH---IPEHCGGM 398
D Q+ +E KF ++ I P A D + +P V W++ G N H PE GGM
Sbjct: 33 DTQEQFKESVHKFAQETIAPHAAAIDASNHFPKDV--NLWKLMGDFNLHGLTAPEEYGGM 90
Query: 399 DMGVFDGCLVAEEL--AYGCTGIMTAMEASGLGQTPVIIAGNKEQQXKYLGRLIDEPLVA 572
+G C+ EE+ A G G+ S L ++ G+ Q+ KYL +LI V
Sbjct: 91 GLGYMYHCIAMEEISRASGSVGLSYGAH-SNLCINQLVRHGSPAQKLKYLPKLISGEHVG 149
Query: 573 A 575
A
Sbjct: 150 A 150
>06_02_0283 +
13726047-13726090,13726160-13726266,13726515-13726621,
13726735-13726812,13734948-13735071,13735585-13735658,
13735742-13735801,13737561-13737670,13737806-13737965,
13738218-13738360,13738461-13738605,13738727-13738819,
13740070-13740186
Length = 453
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +3
Query: 225 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEH-CGGMD 401
LT+E+K LQ R+F ++E+ P+ ++ + E+P+ ++ K +G+ G I + C G+
Sbjct: 61 LTEEEKDLQIKVRQFMENEVAPIISKFWEKAEFPFHLIPKMSTLGIAGGTIKGYGCPGLS 120
Query: 402 MGVFDGCLVAEELAYGCTGIMT-AMEASGLGQTPVIIAGNKEQQXKYLGRLIDEPLVAAY 578
C + E+A I + + S L + G++ Q+ KYL L V Y
Sbjct: 121 GPACAMCFL--EIARVDASIASFCLVQSCLAMVSIAQLGSEAQKEKYLRPLSKMQKVCVY 178
>05_01_0464 -
3670397-3670525,3671152-3671244,3671366-3671537,
3671626-3671702,3671819-3671978,3672104-3672213,
3672321-3672380,3672492-3672629,3672922-3672999,
3673227-3673333,3674506-3674598,3674708-3674723
Length = 410
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 225 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNG 371
LTDE+K L++ R + EI P+ +Y + E+P+ + K +GL G
Sbjct: 47 LTDEEKTLRKKVRGIMEREIAPIMTEYWEKAEFPFHAIPKLATLGLAGG 95
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 31.9 bits (69), Expect = 0.41
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 448 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 290
P + S + PS +P S P S P PTS A+ T GYSP SY P +
Sbjct: 1685 PTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTS 1736
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 448 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 290
P + S + PS +P S P S P PTS A+ T YSP SY P +
Sbjct: 1622 PTSPSYSPTSPSYSPTS--PSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTS 1673
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 448 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PATGMIS 278
P + S + PS +P S P S P PTS ++ T YSP SY P + + S
Sbjct: 1594 PTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYS 1649
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = -1
Query: 490 PSPLASXAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPV 311
PS S A P H Y+ SS P + P S P PTS ++ YSP
Sbjct: 1744 PSYNPSSAKYSPSHAYSPSSPRLSPYS---QTSPNYSPTSPTYSPTSPSYSQPSPSYSPT 1800
Query: 310 LSY 302
Y
Sbjct: 1801 SPY 1803
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 448 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 290
P + S + PS +P S P S P PTS ++ T YSP SY P +
Sbjct: 1664 PTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1715
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 448 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSP 314
P + S + PS +P S P S P PTS A+ T YSP
Sbjct: 1747 PTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSSAYSPTSPAYSP 1789
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 448 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 290
P + S + PS +P S P S PTS A+ T GYSP SY P++
Sbjct: 1754 PTSPSYSPTSPSYSPTS--PSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSS 1805
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -1
Query: 457 PVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 290
P P S S T PS +P S S P PTS ++ T YSP SY P +
Sbjct: 1715 PTSPSYSYSPT-SPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1770
>05_04_0443 -
21283680-21283940,21284044-21284118,21284620-21284649,
21286744-21287247
Length = 289
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -1
Query: 475 SXAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVLS 305
S A ++P P + A+ S++P +PP +G P + P S + P+ S
Sbjct: 31 SAAAVLPARPPSPPRASIPVSSSPPLLPPPVAGSKPQLPPFSSSSSVASSSSPPLPS 87
>03_02_0875 +
12038365-12039329,12039417-12039593,12039651-12039893,
12040045-12040124,12040242-12040508,12040599-12040710,
12040757-12041071,12041357-12041366
Length = 722
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 463 IIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 344
++P ASSS T +++P + Q SG CP P+S A
Sbjct: 63 LLPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWA 102
>01_06_1827 +
40169001-40169263,40169358-40169472,40170090-40170201,
40170556-40170623,40170798-40170852,40170948-40171027,
40171811-40171924,40172178-40172296,40173064-40173181,
40173264-40173394,40173535-40173688,40173922-40174017
Length = 474
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 303 IDPPQE*FHPS*IYALVPEALSAHRLIRNKS 211
+DPP++ HPS I AL ALS + + KS
Sbjct: 362 VDPPRKGLHPSVICALQKVALSERKAYKAKS 392
>09_03_0218 +
13539481-13540082,13540171-13540276,13540645-13540960,
13541187-13541263,13541269-13541895,13542783-13543112,
13543442-13543747,13543824-13543896,13544004-13544089,
13544219-13544396,13545311-13545756
Length = 1048
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 453 CIRMQAPQPQDNHQTHPCPYHRNVLECVR 367
CI+ + P+ Q CP+ RN+ C R
Sbjct: 197 CIKNKYPEMQQAEVRDKCPFCRNICNCTR 225
>01_06_1520 -
37950262-37950271,37950639-37950749,37950965-37951187,
37951291-37951525,37951641-37951772,37951865-37952230
Length = 358
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 487 SPLASXAVIIPVHPYASSSATRQPSNTPMSIPP 389
+P ++ + V PYAS S++ PS +SIPP
Sbjct: 25 APRRPRSLRLRVTPYASVSSSSSPSTFAVSIPP 57
>01_06_0736 -
31585840-31586459,31586545-31587070,31588051-31588149,
31589344-31589427,31589458-31589775,31589907-31590113
Length = 617
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 423 DNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPPSYHID 298
DN++ + Y+ +VL + S GQL P PP+ ++D
Sbjct: 253 DNYKMYLPGYNSDVLNNLESTGQLEYPQFNLPQELPPNAYLD 294
>11_01_0560 - 4413174-4414469
Length = 431
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 439 SSSATRQPSNTPMSIPPQCSGMCPFI 362
SSSAT PS++ +S PP S + P I
Sbjct: 249 SSSATTTPSDSSLSSPPSLSSVFPRI 274
>08_01_0686 + 6049563-6050900
Length = 445
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 303 IDPPQE*FHPS*IYALVPEALSAHRLIRNK 214
IDPP FH S +Y V E LS L NK
Sbjct: 310 IDPPPTVFHQSWLYVSVDERLSLLYLCDNK 339
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 514 PAIMTGVWPS-PLASXAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTS 350
P +++ PS P A +V++P +SSA + ++ P + P P +P S
Sbjct: 710 PELVSSAVPSVPRAFESVLVPATDLLTSSAGAEKASKPAATPGPAPQAVPLPKPVS 765
>02_05_1154 + 34506915-34507467,34508334-34508388,34508933-34509038
Length = 237
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = -1
Query: 526 CSLFPAIMTGVWPSPLASXAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCP 368
C+L P + PSPL V P +A P P ++P C+ + P
Sbjct: 18 CALPPPALHACRPSPLHHNTVRRHCEPLIPLAAIALPRRAPPTVPGCCTQVVP 70
>02_04_0640 -
24664841-24664855,24664895-24664978,24665232-24665319,
24665457-24667318
Length = 682
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3
Query: 129 VRATRPIYRKLXXXXXXXXXXKPIPTTGFCFELTDEQKALQELA 260
VR TRP YR L +P GF F + AL +A
Sbjct: 294 VRGTRPDYRSLVPSSILNHTICTVPVHGFGFGADHDSDALHSIA 337
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,998,015
Number of Sequences: 37544
Number of extensions: 382992
Number of successful extensions: 1079
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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