Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_H21
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 136 1e-32
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 127 5e-30
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 124 5e-29
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 62 3e-10
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 60 9e-10
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 59 2e-09
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 59 2e-09
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 48 7e-06
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 45 5e-05
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 43 2e-04
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 38 0.004
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 38 0.007
AL033514-6|CAA22096.2| 373|Caenorhabditis elegans Hypothetical ... 31 0.86
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 2.0
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 2.0
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 28 4.6
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 28 4.6
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 28 4.6
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 28 4.6
U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated ... 28 6.0
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 28 6.0
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 28 6.0
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 28 6.0
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 27 8.0
U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon gu... 27 8.0
U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon gu... 27 8.0
U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon gu... 27 8.0
U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon gu... 27 8.0
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 27 8.0
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 27 8.0
AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFO... 27 8.0
AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFOR... 27 8.0
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 136 bits (329), Expect = 1e-32
Identities = 59/125 (47%), Positives = 86/125 (68%)
Frame = +3
Query: 204 TTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPE 383
+TG F+LT +Q + RKF DE+IPVAG+YDKT EYPW ++KKA G + IPE
Sbjct: 21 STGMDFQLTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEIIKKAHAQGYLIADIPE 80
Query: 384 HCGGMDMGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPVIIAGNKEQQXKYLGRLIDEP 563
GG+ + + C+++EE+AYGC+GI TA+ A+ L TP+I+ N + + ++LGR+ID P
Sbjct: 81 AYGGLGVDMVSNCIISEEMAYGCSGIATAIMANDLALTPLILCANDDIKKRFLGRMIDNP 140
Query: 564 LVAAY 578
VA+Y
Sbjct: 141 FVASY 145
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 127 bits (307), Expect = 5e-30
Identities = 55/120 (45%), Positives = 82/120 (68%)
Frame = +3
Query: 219 FELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGM 398
F+L++ QK +Q+ A KF+KD ++P A ++D++GE+PW +V++A +GLMN IPE GG
Sbjct: 29 FDLSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGP 88
Query: 399 DMGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPVIIAGNKEQQXKYLGRLIDEPLVAAY 578
M + L+ E L+YGCTGI + L PV I+GN+EQ+ KYLG L EP++A+Y
Sbjct: 89 GMTTLETALIVEALSYGCTGIQLGIMGPSLAIAPVYISGNEEQKKKYLGALAAEPIIASY 148
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 124 bits (299), Expect = 5e-29
Identities = 54/120 (45%), Positives = 80/120 (66%)
Frame = +3
Query: 219 FELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGM 398
FEL+D QK +Q A KF+KD ++P A ++DK+GE+PW +VK+A +G MN IPE GG
Sbjct: 23 FELSDTQKEIQSHAIKFSKDVLVPNAAKFDKSGEFPWEIVKQAHSLGFMNTIIPEKYGGP 82
Query: 399 DMGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPVIIAGNKEQQXKYLGRLIDEPLVAAY 578
+ D L+ E L+YGC+G+ A+ L P+ ++G +EQ+ KYLG L EP++A+Y
Sbjct: 83 GLSNLDTALIVEALSYGCSGLQIAIFGPSLAAAPICLSGTEEQKKKYLGMLAAEPIIASY 142
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 62.1 bits (144), Expect = 3e-10
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = +3
Query: 225 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDM 404
LT+ + + RKF+KD + P+ + DK + V + +E GLM H+PE GG
Sbjct: 48 LTENELFFADTVRKFSKDVVKPLVREMDKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGS 107
Query: 405 GVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPVIIAGNKEQQXKYLGRLIDEPLVA 572
F+ +V EELA + + + L + +I G +EQ+ KYL RL + L +
Sbjct: 108 SFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKYLPRLCSDSLAS 164
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 60.5 bits (140), Expect = 9e-10
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Frame = +3
Query: 222 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMD 401
+L++E+ ++ R+F + I P+ + D + V+ +E GLM IPE GG
Sbjct: 39 QLSEEESSIVGTVRRFAVNVIKPLVREMDDKSQMHQSVITGTFENGLMGIEIPEKYGGPG 98
Query: 402 MGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPVII-AGNKEQQXKYLGRLIDEPL 566
FD LV EELA + ++ P+II G +EQ+ KYL +++ E +
Sbjct: 99 SSFFDAVLVIEELAKVDPSVSVFVDVQNTLVAPLIIQLGTEEQKQKYLPKIVTEAI 154
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 59.3 bits (137), Expect = 2e-09
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +3
Query: 201 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGH 374
P F L DE+ AL++ R+F E+ P A + DK + P KK + GL+
Sbjct: 31 PIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGIT 90
Query: 375 IPEHCGGMDMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPVIIAGNKEQQXKYLGRL 551
P GG M F + EEL+ GI + A S L ++ G++EQ+ KYL +L
Sbjct: 91 APAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPKL 150
Query: 552 I 554
I
Sbjct: 151 I 151
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 59.3 bits (137), Expect = 2e-09
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +3
Query: 201 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGH 374
P F L DE+ AL++ R+F E+ P A + DK + P KK + GL+
Sbjct: 31 PIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGIT 90
Query: 375 IPEHCGGMDMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPVIIAGNKEQQXKYLGRL 551
P GG M F + EEL+ GI + A S L ++ G++EQ+ KYL +L
Sbjct: 91 APAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPKL 150
Query: 552 I 554
I
Sbjct: 151 I 151
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 47.6 bits (108), Expect = 7e-06
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = +3
Query: 225 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDM 404
L + +K L E + F + + P+ + D+ ++KKA+++ LM I GG +
Sbjct: 36 LNENEKKLVEKVKNFAQSSVKPLVREMDRDARINKQLLKKAFDLKLMGLKIDPKYGGSGV 95
Query: 405 GVFDGCLVAEELAYGCTGIMTAMEASGLGQTPVIIA-GNKEQQXKYLGRLIDEPLVA 572
F+ L EEL+ I M P+I GN+E + KYL +L + + A
Sbjct: 96 SFFELVLAVEELSKIDPAIALIMHLQNALVAPLIEEFGNEELKEKYLKKLCKDSVGA 152
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +3
Query: 252 ELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDMGVFDGCLVA 431
E A +F K E+ P +DK GE P V++KA E+G + GG + ++
Sbjct: 36 EAAHQFAKKEMYPKMADWDKQGELPMDVLRKAGEMGFGAIYCSGDHGGSGLSRLHASVIF 95
Query: 432 EELAYGC 452
E+L+ GC
Sbjct: 96 EQLSMGC 102
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 306 DKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDMGVFDGCLVAEELAYGCTGIMTAMEASG 485
D+T E V+ +E GLM +PE GG FD LV EE++ + ++
Sbjct: 2 DRTSEMTPAVINGCFENGLMGIEVPEKYGGPGATFFDAALVIEEISKVDASVGAMVDVHN 61
Query: 486 LGQTPVII-AGNKEQQXKYL 542
P+II G ++Q+ KYL
Sbjct: 62 TLFIPLIIELGTEKQKEKYL 81
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 363 MNGHIPEHCGGMDMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPVIIAGNKEQQXKY 539
M H+PE GG F+ +V EELA + + + L + +I G +EQ+ KY
Sbjct: 1 MGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKY 60
Query: 540 LGRLIDEPLVA 572
L RL + L +
Sbjct: 61 LPRLCSDSLAS 71
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 37.5 bits (83), Expect = 0.007
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +3
Query: 243 ALQELARKFTKDEIIPVAGQYDKTGEYPWP-VVKKAWEVGLMNGHIPEHCGGMDMGVFDG 419
A+Q K K++I P Q++K+G YP V K ++G+ + P GG
Sbjct: 31 AMQNSLAKLIKEKINPNVAQWEKSGRYPAHFVFKMLGQLGVFAVNKPVDYGGTGRDFAMS 90
Query: 420 CLVAEEL-AYGCTGI-MTAMEASGLGQTPVIIAGNKEQQXKYLGRLIDEPLVAA 575
+AE++ A C I M+ M S + + G+ + ++L I+ LV++
Sbjct: 91 IAIAEQIGAVDCGSIPMSVMVQSDMSTPALAQFGSDSLRNRFLRPSINGDLVSS 144
>AL033514-6|CAA22096.2| 373|Caenorhabditis elegans Hypothetical
protein Y75B8A.6 protein.
Length = 373
Score = 30.7 bits (66), Expect = 0.86
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -2
Query: 435 PQPQDNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPP 313
P PQ HP P+H V S P LQ A+ TPP
Sbjct: 15 PPPQMLQMHHPLPHHVAVFAHGSSSQNSQAPPLQAASATPP 55
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 487 SPLASXAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL 308
SP + A PV P S ++ PS +P S P S P PTS ++ T YSP
Sbjct: 1597 SPTSPAAGQSPVSPSYSPTS---PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1651
Query: 307 -SY*PAT 290
SY P++
Sbjct: 1652 PSYSPSS 1658
Score = 27.5 bits (58), Expect = 8.0
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = -1
Query: 613 YIGSSXQVRSPP*AATNGSSISLPRYXFCCSLFPAIMTGVWPSPLA-SXAVIIPVH-PYA 440
Y G S V SP ++ S++ P Y + SP++ S + P + P +
Sbjct: 1567 YGGMSPGVYSP---SSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTS 1623
Query: 439 SSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 290
S + PS +P S P S P PTS ++ + YSP SY P++
Sbjct: 1624 PSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1672
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 445 YASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSP 314
Y SS T P++ PQ S P PTS ++ + YSP
Sbjct: 1758 YTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSP 1801
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 487 SPLASXAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL 308
SP + A PV P S ++ PS +P S P S P PTS ++ T YSP
Sbjct: 1604 SPTSPAAGQSPVSPSYSPTS---PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1658
Query: 307 -SY*PAT 290
SY P++
Sbjct: 1659 PSYSPSS 1665
Score = 27.5 bits (58), Expect = 8.0
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = -1
Query: 613 YIGSSXQVRSPP*AATNGSSISLPRYXFCCSLFPAIMTGVWPSPLA-SXAVIIPVH-PYA 440
Y G S V SP ++ S++ P Y + SP++ S + P + P +
Sbjct: 1574 YGGMSPGVYSP---SSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTS 1630
Query: 439 SSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 290
S + PS +P S P S P PTS ++ + YSP SY P++
Sbjct: 1631 PSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1679
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 445 YASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSP 314
Y SS T P++ PQ S P PTS ++ + YSP
Sbjct: 1765 YTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSP 1808
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 442 HTDAPEL*PXWKPVDLAKLPSLLLEIRS 525
H P W PV A LPSL EIRS
Sbjct: 123 HLTVPSAISTWFPVQYAVLPSLFFEIRS 150
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical protein
T14G10.2a protein.
Length = 1470
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 523 SLFPAIMTGVWPSPLASXAVIIPVHPYA-SSSATRQPSNTPMS 398
S F G+ SP S +V+IP HP+ S ++ R S +P S
Sbjct: 1327 STFYLTSDGLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1369
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 523 SLFPAIMTGVWPSPLASXAVIIPVHPYA-SSSATRQPSNTPMS 398
S F G+ SP S +V+IP HP+ S ++ R S +P S
Sbjct: 1327 STFYLTSDGLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1369
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 523 SLFPAIMTGVWPSPLASXAVIIPVHPYA-SSSATRQPSNTPMS 398
S F G+ SP S +V+IP HP+ S ++ R S +P S
Sbjct: 1204 STFYLTSDGLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1246
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 523 SLFPAIMTGVWPSPLASXAVIIPVHPYA-SSSATRQPSNTPMS 398
S F G+ SP S +V+IP HP+ S ++ R S +P S
Sbjct: 1327 STFYLTSDGLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1369
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 523 SLFPAIMTGVWPSPLASXAVIIPVHPYA-SSSATRQPSNTPMS 398
S F G+ SP S +V+IP HP+ S ++ R S +P S
Sbjct: 1327 STFYLTSDGLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1369
>U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated
protein 11, isoform c protein.
Length = 657
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 490 PSPLASXAVIIPVHPYASSSATRQPSNTPMSIP 392
P P AS P++P+A SAT S P P
Sbjct: 481 PPPPASQGAPAPINPFADPSATAASSAQPFGDP 513
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 457 PVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 344
P HPY+ SS P++ + PPQ I PT QA
Sbjct: 87 PSHPYSISSQQSSPAHPSSAFPPQWP-----ITPTDQA 119
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 457 PVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 344
P HPY+ SS P++ + PPQ I PT QA
Sbjct: 87 PSHPYSISSQQSSPAHPSSAFPPQWP-----ITPTDQA 119
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 457 PVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 344
P HPY+ SS P++ + PPQ I PT QA
Sbjct: 132 PSHPYSISSQQSSPAHPSSAFPPQWP-----ITPTDQA 164
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -2
Query: 435 PQPQDNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPPSYHIDPPQ 289
PQPQ Q P Y R ++ G LP P T PP + P+
Sbjct: 178 PQPQPQQQPQPPCYQRQPEPPRQTGGCLPGPYYSPNTMAPPQHQQPYPE 226
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -2
Query: 435 PQPQDNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPPSYHIDPPQ 289
PQPQ Q P Y R ++ G LP P T PP + P+
Sbjct: 178 PQPQPQQQPQPPCYQRQPEPPRQTGGCLPGPYYSPNTMAPPQHQQPYPE 226
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -2
Query: 435 PQPQDNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPPSYHIDPPQ 289
PQPQ Q P Y R ++ G LP P T PP + P+
Sbjct: 178 PQPQPQQQPQPPCYQRQPEPPRQTGGCLPGPYYSPNTMAPPQHQQPYPE 226
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 444 YGCTGIMTAMEASGLGQTPVIIA 512
+GCTG +T SG G+T V IA
Sbjct: 1390 FGCTGPITVHCCSGAGRTAVFIA 1412
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 444 YGCTGIMTAMEASGLGQTPVIIA 512
+GCTG +T SG G+T V IA
Sbjct: 2103 FGCTGPITVHCCSGAGRTAVFIA 2125
>Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical protein
C09D8.1c protein.
Length = 1216
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 444 YGCTGIMTAMEASGLGQTPVIIA 512
+GCTG +T SG G+T V IA
Sbjct: 1139 FGCTGPITVHCCSGAGRTAVFIA 1161
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 444 YGCTGIMTAMEASGLGQTPVIIA 512
+GCTG +T SG G+T V IA
Sbjct: 1390 FGCTGPITVHCCSGAGRTAVFIA 1412
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 444 YGCTGIMTAMEASGLGQTPVIIA 512
+GCTG +T SG G+T V IA
Sbjct: 2103 FGCTGPITVHCCSGAGRTAVFIA 2125
>U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform a protein.
Length = 1144
Score = 27.5 bits (58), Expect = 8.0
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +3
Query: 273 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 434
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 268 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 327
Query: 435 ELAYGCTGIMTAMEASGL 488
E Y C G +A+GL
Sbjct: 328 EGEYECIGTNKYGQATGL 345
>U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform d protein.
Length = 1147
Score = 27.5 bits (58), Expect = 8.0
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +3
Query: 273 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 434
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 268 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 327
Query: 435 ELAYGCTGIMTAMEASGL 488
E Y C G +A+GL
Sbjct: 328 EGEYECIGTNKYGQATGL 345
>U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform b protein.
Length = 1328
Score = 27.5 bits (58), Expect = 8.0
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +3
Query: 273 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 434
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 452 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 511
Query: 435 ELAYGCTGIMTAMEASGL 488
E Y C G +A+GL
Sbjct: 512 EGEYECIGTNKYGQATGL 529
>U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform c protein.
Length = 1331
Score = 27.5 bits (58), Expect = 8.0
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +3
Query: 273 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 434
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 452 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 511
Query: 435 ELAYGCTGIMTAMEASGL 488
E Y C G +A+GL
Sbjct: 512 EGEYECIGTNKYGQATGL 529
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 444 YGCTGIMTAMEASGLGQTPVIIA 512
+GCTG +T SG G+T V IA
Sbjct: 1410 FGCTGPITVHCCSGAGRTAVFIA 1432
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 444 YGCTGIMTAMEASGLGQTPVIIA 512
+GCTG +T SG G+T V IA
Sbjct: 2123 FGCTGPITVHCCSGAGRTAVFIA 2145
>AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFORM
protein.
Length = 1147
Score = 27.5 bits (58), Expect = 8.0
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +3
Query: 273 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 434
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 268 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 327
Query: 435 ELAYGCTGIMTAMEASGL 488
E Y C G +A+GL
Sbjct: 328 EGEYECIGTNKYGQATGL 345
>AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFORM
protein.
Length = 1331
Score = 27.5 bits (58), Expect = 8.0
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +3
Query: 273 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 434
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 452 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 511
Query: 435 ELAYGCTGIMTAMEASGL 488
E Y C G +A+GL
Sbjct: 512 EGEYECIGTNKYGQATGL 529
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,069,212
Number of Sequences: 27780
Number of extensions: 303118
Number of successful extensions: 835
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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