Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_H21
         (613 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    26   0.25 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    26   0.25 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     24   1.0  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   9.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   9.5  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.5  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -2

Query: 603  PAXRFGHPHRQRLMVRRLVYPDIXSAAPYFQQ**REFGQVHW 478
            PA  F  P+   L++R  V+PD      YF    R   + HW
Sbjct: 1503 PAATFLSPNSTTLVLRLHVWPDNGCPILYFTIQYRPINEFHW 1544


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -2

Query: 603  PAXRFGHPHRQRLMVRRLVYPDIXSAAPYFQQ**REFGQVHW 478
            PA  F  P+   L++R  V+PD      YF    R   + HW
Sbjct: 1499 PAATFLSPNSTTLVLRLHVWPDNGCPILYFTIQYRPINEFHW 1540


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 421 QPSNTPMSIPPQCSGMCPFIR 359
           +P  TP S+ P  +G+ P++R
Sbjct: 254 RPKMTPQSLLPSQTGLSPYLR 274


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 294 AGQYDKTGEYPWPV 335
           +G+YD+T  YP  V
Sbjct: 61  SGEYDRTKNYPLDV 74


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 294 AGQYDKTGEYPWPV 335
           +G+YD T  YP+ V
Sbjct: 60  SGEYDHTKNYPFDV 73


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 294 AGQYDKTGEYPWPV 335
           +G+YD T  YP+ V
Sbjct: 57  SGEYDHTKNYPFDV 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,920
Number of Sequences: 438
Number of extensions: 4029
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)