Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_H20
(565 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0143 + 31962241-31962291,31962385-31962506,31962572-319626... 70 1e-12
06_01_1040 + 8163654-8163704,8163814-8163935,8164011-8164092,816... 69 3e-12
09_04_0439 - 17594131-17594271,17595018-17595100,17595199-175953... 37 0.013
12_01_0722 + 6355972-6359031 34 0.068
12_01_0740 + 6646471-6649407 33 0.16
08_02_1017 - 23616244-23616381,23616471-23616537,23617160-236172... 33 0.16
12_02_0589 + 20850249-20850491,20850583-20851839 33 0.21
12_01_0741 + 6649988-6653065 32 0.27
12_01_0727 + 6446283-6449300 31 0.63
12_01_0731 - 6516894-6517473,6517485-6519574 31 0.84
12_01_0715 - 6230393-6231559,6233234-6234553 31 0.84
12_01_0736 + 6582371-6585370 30 1.1
12_01_0718 + 6339982-6342981 30 1.1
01_01_0421 + 3181139-3184207 30 1.1
03_01_0009 - 89127-89924,90090-90518,90582-90716,91102-91382,916... 30 1.5
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 29 2.6
04_01_0203 + 2432745-2433642,2433723-2433806,2434458-2434471 29 3.4
01_01_0424 + 3200223-3200634,3200677-3200836,3200987-3201342,320... 29 3.4
12_01_0708 - 6137865-6140909 28 4.5
12_01_0686 - 5855216-5858263 28 5.9
08_02_0006 + 11204835-11206382 28 5.9
01_01_0423 + 3198075-3199010 28 5.9
>03_06_0143 +
31962241-31962291,31962385-31962506,31962572-31962671,
31962775-31962822,31963096-31963251,31963330-31963426,
31963525-31963567,31963970-31964037,31964139-31964223,
31964297-31964345,31964566-31964638,31964708-31964768,
31965417-31965483,31965709-31965762,31965854-31965982,
31966485-31966548,31966655-31966728,31966793-31966867,
31966972-31967040,31967759-31967848,31968014-31968121,
31968251-31968298
Length = 576
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = +2
Query: 344 SQKTGAVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVSGQWKGYTGKAITD 523
S + +VLH+ALR +++ I NG +V +V V + +K+FS+ SG W G TGKA+T+
Sbjct: 110 STENRSVLHVALRAPRDEVINSNGVNVVPEVWGVKDKIKQFSETFRSGSWVGATGKALTN 169
Query: 524 VINIGIGGSDXGPL 565
V+++GIGGS GPL
Sbjct: 170 VVSVGIGGSFLGPL 183
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 145 LQLFQQDRERFEKFSFCIPTPNDGD-ILLDYSKNRINSDVFKLLLDLAKSRNVEQARDAM 321
L+ D ER + + C+ ++ + I LDYS+ R + + L LA++ +++ + M
Sbjct: 43 LRHLMHDVERCKAMTACLLIDSEYEGIYLDYSRQRATGETMEKLFKLAEAAKLKEKIEKM 102
Query: 322 FSGQKINFTEDR 357
F G KIN TE+R
Sbjct: 103 FRGDKINSTENR 114
>06_01_1040 +
8163654-8163704,8163814-8163935,8164011-8164092,
8164166-8164213,8164516-8164671,8164747-8164843,
8164942-8164984,8165375-8165442,8165533-8165617,
8165698-8165746,8165968-8166040,8166119-8166179,
8167114-8167180,8167400-8167453,8167537-8167665,
8168192-8168255,8168366-8168439,8168523-8168576,
8168696-8168764,8169394-8169483,8169656-8169763,
8169876-8169923
Length = 563
Score = 68.5 bits (160), Expect = 3e-12
Identities = 33/74 (44%), Positives = 51/74 (68%)
Frame = +2
Query: 344 SQKTGAVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVSGQWKGYTGKAITD 523
S + +VLH+ALR +++ I +G +V +V V + +K+FS+ SG W G TGKA+T+
Sbjct: 104 STENRSVLHVALRAPRDEVIKSDGVNVVPEVWGVKDKIKQFSETFRSGSWVGATGKALTN 163
Query: 524 VINIGIGGSDXGPL 565
V+++GIGGS GPL
Sbjct: 164 VVSVGIGGSFLGPL 177
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 220 ILLDYSKNRINSDVFKLLLDLAKSRNVEQARDAMFSGQKINFTEDR 357
I LDYS+ R + + L LA++ +++ + MFSG KIN TE+R
Sbjct: 63 IFLDYSRQRATGETMEKLFKLAEAAKLKEKIEKMFSGDKINSTENR 108
>09_04_0439 -
17594131-17594271,17595018-17595100,17595199-17595355,
17595438-17595576,17595668-17595720,17596150-17596257,
17596345-17596413,17596505-17596570,17596651-17596794,
17597372-17597455,17597539-17597637,17597753-17597875,
17598283-17598831
Length = 604
Score = 36.7 bits (81), Expect = 0.013
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 398 PILVNGKDVSTDVNAVLEHMKEFSDQVVSGQWKGYTGKA--ITDVINIGIGGSDXGP 562
P L + T + L+ + FS VVSG+ K + A T +++IGIGGS GP
Sbjct: 153 PGLAPNSFLRTKIETTLDRILAFSQDVVSGKIKPPSSPAGRFTQILSIGIGGSALGP 209
>12_01_0722 + 6355972-6359031
Length = 1019
Score = 34.3 bits (75), Expect = 0.068
Identities = 22/52 (42%), Positives = 24/52 (46%)
Frame = +1
Query: 175 FEKFSFCIPTPNDGDILLDYSKNRINSDVFKLLLDLAKSRNVEQARDAMFSG 330
F F IP P G I LDYS NR +S L KS V +A D SG
Sbjct: 594 FNNFDGAIPVPQKGSITLDYSTNRFSSMPLNFSSYL-KSTVVLKASDNSLSG 644
>12_01_0740 + 6646471-6649407
Length = 978
Score = 33.1 bits (72), Expect = 0.16
Identities = 21/52 (40%), Positives = 24/52 (46%)
Frame = +1
Query: 175 FEKFSFCIPTPNDGDILLDYSKNRINSDVFKLLLDLAKSRNVEQARDAMFSG 330
F F IP P G I LDYS NR +S L K+ V +A D SG
Sbjct: 553 FNNFDGAIPVPQKGSITLDYSTNRFSSMPLNFSSYL-KNTVVLKASDNSLSG 603
>08_02_1017 -
23616244-23616381,23616471-23616537,23617160-23617238,
23617330-23617486,23617581-23617719,23617820-23617872,
23618037-23618120,23618291-23618359,23618488-23618553,
23618657-23618800,23619331-23619414,23619498-23619596,
23620097-23620219,23620745-23621290
Length = 615
Score = 33.1 bits (72), Expect = 0.16
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 368 HIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVSGQWKGYTGKA--ITDVINIGI 541
H LRN P L + + LE + F+ V+S + + + A T +++IGI
Sbjct: 146 HYWLRN----PALAPNSFLRDKIETTLERILAFASDVISAKIRPPSSPAGRFTQILSIGI 201
Query: 542 GGSDXGP 562
GGS GP
Sbjct: 202 GGSSLGP 208
>12_02_0589 + 20850249-20850491,20850583-20851839
Length = 499
Score = 32.7 bits (71), Expect = 0.21
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 49 IVTMEPKINLKQDAAYQKLQQYYNVNSTKINMLQLFQQDRERFEKFS 189
+V ME + + K+ AAY L Y S + N+ +++++ RE F KFS
Sbjct: 256 LVEMEKRASRKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFS 302
>12_01_0741 + 6649988-6653065
Length = 1025
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 175 FEKFSFCIPTPNDGDILLDYSKNRINS 255
F F IP P G + LDYS NR +S
Sbjct: 587 FNNFEGTIPIPEQGSVTLDYSNNRFSS 613
>12_01_0727 + 6446283-6449300
Length = 1005
Score = 31.1 bits (67), Expect = 0.63
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 175 FEKFSFCIPTPNDGDILLDYSKNRINS 255
F IP P +G + LDYS NR +S
Sbjct: 580 FNNIEGAIPIPKEGSVTLDYSNNRFSS 606
>12_01_0731 - 6516894-6517473,6517485-6519574
Length = 889
Score = 30.7 bits (66), Expect = 0.84
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 175 FEKFSFCIPTPNDGDILLDYSKNRINS 255
F IP P +G + LDYS NR +S
Sbjct: 587 FNNIEGTIPIPKEGSVTLDYSNNRFSS 613
>12_01_0715 - 6230393-6231559,6233234-6234553
Length = 828
Score = 30.7 bits (66), Expect = 0.84
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 175 FEKFSFCIPTPNDGDILLDYSKNRINS 255
F IP P +G + LDYS NR +S
Sbjct: 502 FNNIEGVIPIPKEGSVTLDYSNNRFSS 528
>12_01_0736 + 6582371-6585370
Length = 999
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 175 FEKFSFCIPTPNDGDILLDYSKNRINS 255
F K IP P G I LDYS N+ +S
Sbjct: 575 FNKIEGVIPIPQKGSITLDYSNNQFSS 601
>12_01_0718 + 6339982-6342981
Length = 999
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 175 FEKFSFCIPTPNDGDILLDYSKNRINS 255
F K IP P G I LDYS N+ +S
Sbjct: 575 FNKIEGVIPIPQKGSITLDYSNNQFSS 601
>01_01_0421 + 3181139-3184207
Length = 1022
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 175 FEKFSFCIPTPNDGDILLDYSKNRINS 255
F KF IP P + +LDYS NR +S
Sbjct: 598 FNKFEGPIPLPQNSGTVLDYSNNRFSS 624
>03_01_0009 -
89127-89924,90090-90518,90582-90716,91102-91382,
91634-91809,91899-92011,92157-92278,92375-92594
Length = 757
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 387 RLRRAICSTAPVFCEVYLLT*EHGISGLFNISALSEIEEQLKN 259
R IC P FC YL++ + G+S L++ S S++ K+
Sbjct: 158 RTSSKICKNVPSFCTAYLVS-KDGLSSLYSSSLESDLASSSKS 199
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 254 VMFLSCSSISLRAEMLNKPEMPCSQV 331
V F SC+S+ AE+LN ++ CS +
Sbjct: 353 VFFSSCNSVKFHAELLNFLQIECSDI 378
>04_01_0203 + 2432745-2433642,2433723-2433806,2434458-2434471
Length = 331
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 272 SSISLRAEMLNKPEMPCSQVKR--*TSQKTGAVLHIALRNRQNKPILVNGKDVSTDVN 439
SS++++ + NKPE+P S + S K+ + + N++N+P + G V D +
Sbjct: 211 SSVAVQHDQTNKPELPSSVAESGGIVSPKSPEKTNEQIVNKKNEPPVAPGTTVQDDTH 268
>01_01_0424 +
3200223-3200634,3200677-3200836,3200987-3201342,
3201958-3203252
Length = 740
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 175 FEKFSFCIPTPNDGDILLDYSKNRINS 255
F F IP P + +LDYS NR +S
Sbjct: 316 FNMFEGTIPLPQNSRFVLDYSNNRFSS 342
>12_01_0708 - 6137865-6140909
Length = 1014
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 196 IPTPNDGDILLDYSKNRINS 255
IP P +G +LDYS N+ +S
Sbjct: 600 IPVPQEGSTMLDYSSNQFSS 619
>12_01_0686 - 5855216-5858263
Length = 1015
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 196 IPTPNDGDILLDYSKNRINSDVFKLLLDLAKSRNVEQARDAM 321
IP P +G LDYS N+ +S L L ++ + +R+ +
Sbjct: 599 IPIPQEGSSTLDYSSNQFSSIPLHYLTYLGETLTFKASRNKL 640
>08_02_0006 + 11204835-11206382
Length = 515
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = +1
Query: 100 KLQQYYNVNSTKINMLQLFQQDRERFEKFSFCIPTPNDGDILLDYSKNRINSDVFKLLLD 279
K ++ + +NS D++ EK + P+ G+ LLDY + + KLL++
Sbjct: 51 KKEKAHALNSLAYYFKNFVPSDQKITEKRAKMQDIPHHGERLLDYREEKSRDGQDKLLME 110
Query: 280 LAKSRNVEQARDAMFSGQKINFTEDRGST 366
+ +S ++ +FS KI + D S+
Sbjct: 111 VEQSMATDK-NTKVFS-DKILISADPASS 137
>01_01_0423 + 3198075-3199010
Length = 311
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 175 FEKFSFCIPTPNDGDILLDYSKNRINS 255
F F IP P D +LDYS N +S
Sbjct: 35 FNMFEGPIPLPRDSGTVLDYSNNHFSS 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,594,309
Number of Sequences: 37544
Number of extensions: 282776
Number of successful extensions: 678
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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