Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_H20
(565 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical ... 116 9e-27
AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical ... 116 9e-27
L23646-2|AAK67235.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 28 4.0
AF025459-4|AAB70984.2| 292|Caenorhabditis elegans Hypothetical ... 27 7.0
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 27 7.0
Z81527-12|CAB04277.2| 487|Caenorhabditis elegans Hypothetical p... 27 9.3
U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical pr... 27 9.3
AC024211-4|AAP82631.1| 487|Caenorhabditis elegans Hypothetical ... 27 9.3
>AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical
protein Y87G2A.8b protein.
Length = 586
Score = 116 bits (280), Expect = 9e-27
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = +2
Query: 359 AVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVSGQWKGYTGKAITDVINIG 538
AVLH+ALRNR N+PILV+GKDV DVN VL HMKEF ++++SG W GYTGK ITDV+NIG
Sbjct: 131 AVLHVALRNRANRPILVDGKDVMPDVNRVLAHMKEFCNEIISGSWTGYTGKKITDVVNIG 190
Query: 539 IGGSDXGPL 565
IGGSD GPL
Sbjct: 191 IGGSDLGPL 199
Score = 105 bits (252), Expect = 2e-23
Identities = 50/99 (50%), Positives = 71/99 (71%)
Frame = +1
Query: 61 EPKINLKQDAAYQKLQQYYNVNSTKINMLQLFQQDRERFEKFSFCIPTPNDGDILLDYSK 240
E ++L QDA + +L+++ N +L+LF++D RFEKF+ TP DGD L D+SK
Sbjct: 33 EKAMSLSQDATFVELKRHVEANEKDAQLLELFEKDPARFEKFTRLFATP-DGDFLFDFSK 91
Query: 241 NRINSDVFKLLLDLAKSRNVEQARDAMFSGQKINFTEDR 357
NRI + F+LL+ LAKSR VE++R+AMFS +KINFTE+R
Sbjct: 92 NRITDESFQLLMRLAKSRGVEESRNAMFSAEKINFTENR 130
>AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical
protein Y87G2A.8a protein.
Length = 551
Score = 116 bits (280), Expect = 9e-27
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = +2
Query: 359 AVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVSGQWKGYTGKAITDVINIG 538
AVLH+ALRNR N+PILV+GKDV DVN VL HMKEF ++++SG W GYTGK ITDV+NIG
Sbjct: 96 AVLHVALRNRANRPILVDGKDVMPDVNRVLAHMKEFCNEIISGSWTGYTGKKITDVVNIG 155
Query: 539 IGGSDXGPL 565
IGGSD GPL
Sbjct: 156 IGGSDLGPL 164
Score = 104 bits (249), Expect = 5e-23
Identities = 49/96 (51%), Positives = 70/96 (72%)
Frame = +1
Query: 70 INLKQDAAYQKLQQYYNVNSTKINMLQLFQQDRERFEKFSFCIPTPNDGDILLDYSKNRI 249
++L QDA + +L+++ N +L+LF++D RFEKF+ TP DGD L D+SKNRI
Sbjct: 1 MSLSQDATFVELKRHVEANEKDAQLLELFEKDPARFEKFTRLFATP-DGDFLFDFSKNRI 59
Query: 250 NSDVFKLLLDLAKSRNVEQARDAMFSGQKINFTEDR 357
+ F+LL+ LAKSR VE++R+AMFS +KINFTE+R
Sbjct: 60 TDESFQLLMRLAKSRGVEESRNAMFSAEKINFTENR 95
>L23646-2|AAK67235.1| 304|Caenorhabditis elegans Hypothetical
protein F44E2.10 protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 58 MEPKINLKQDAAYQKLQQYYNVNSTKINMLQLFQQDRERFEKFSFCIPTPNDGD--ILLD 231
+E + +D Y+ N+ +++ ++++Q +R E FS+ +P DG+ I+L
Sbjct: 60 IEYSADTSEDGVSSDHGMQYSFNNAEVDDMEIYQTERWSKESFSYDVPISEDGEYVIILK 119
Query: 232 YSK 240
+S+
Sbjct: 120 FSE 122
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 254 VMFLSCSSISLRAEMLNKPEMPCSQV 331
V F SC+S+ E+LN ++PC +
Sbjct: 319 VFFSSCNSVKFHHELLNYIDIPCMSI 344
>AF025459-4|AAB70984.2| 292|Caenorhabditis elegans Hypothetical
protein H14A12.3 protein.
Length = 292
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 383 NRQNKPILVNGKDVSTDVNAVLEHMK 460
N+ N+ + + KDV T + + LEH+K
Sbjct: 31 NKTNENLWIQRKDVDTTLRSALEHLK 56
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 404 LVNGKDVSTDVNAVLEHMKEFSDQVVSGQWK 496
+V D DV+ +E KEF D+ V +W+
Sbjct: 1227 IVKNDDEQDDVSERIERFKEFLDEEVQTEWE 1257
>Z81527-12|CAB04277.2| 487|Caenorhabditis elegans Hypothetical
protein F35E12.10 protein.
Length = 487
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 184 TFRSAPDLVGKVGAY*FLCCLHCN 113
T+ + DL G VG Y FL CL CN
Sbjct: 261 TYGNMGDLSGNVGGYTFL-CLDCN 283
>U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical
protein F15A8.7 protein.
Length = 472
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 49 IVTMEPKINLKQDAAYQKLQQYYNVNSTKINMLQLFQQDR-ERFEKFSFCIPTPNDGDIL 225
I +EP++ ++ Y +QQ + + QLF D+ ++K+ F N+ +
Sbjct: 110 IARIEPEMQFMEEVQYPMVQQLSKNDINWLKARQLFSSDQASEYKKYGFA--HLNEEQVK 167
Query: 226 LDYSKN 243
L Y+ N
Sbjct: 168 LVYADN 173
>AC024211-4|AAP82631.1| 487|Caenorhabditis elegans Hypothetical
protein Y76B12C.6 protein.
Length = 487
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Frame = +1
Query: 49 IVTMEPKINLKQDAAYQKLQQYY-NVNSTKINMLQLF-------QQDRERFEKFSFCIPT 204
I+ M NL A Q + N+NS N L F +Q+RE F F +
Sbjct: 169 ILAMNTNTNLPPIAGDQPVDTLIRNINSMMNNALTNFFQTKNQEEQEREAFPDFMRAMAI 228
Query: 205 PNDGDILLD 231
P+D D++L+
Sbjct: 229 PHDKDLVLE 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,771,922
Number of Sequences: 27780
Number of extensions: 259065
Number of successful extensions: 650
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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