Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_H17
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical pr... 152 2e-37
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 30 1.3
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein. 30 1.3
Z69787-7|CAA93643.1| 214|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z69634-5|CAA93456.1| 731|Caenorhabditis elegans Hypothetical pr... 28 6.7
AC006610-1|AAK85447.4| 360|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical
protein F56F3.5 protein.
Length = 257
Score = 152 bits (368), Expect = 2e-37
Identities = 78/131 (59%), Positives = 94/131 (71%)
Frame = +3
Query: 198 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 377
TKIASEGLKGRVFEVSL DL ++E FRKF+LIAE VQG+NVL NFH M +T DKL
Sbjct: 53 TKIASEGLKGRVFEVSLGDLN---NSEADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLC 109
Query: 378 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 557
+VKKW TLIEAN VKTTDGY LRVF I FT K +KT Y + +++R IR +M
Sbjct: 110 SIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIRKIRSEMIGC 169
Query: 558 ITRDVTNSELR 590
I ++VT +L+
Sbjct: 170 IEKEVTGCDLK 180
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/46 (58%), Positives = 37/46 (80%)
Frame = +2
Query: 98 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 235
VDPF+RK+WYD+KAP+MF+ RQVG TL+NRTQG + ++G+ F
Sbjct: 20 VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVF 65
Score = 34.7 bits (76), Expect = 0.058
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 595 VVNKLIPDSIAKDIEKXC 648
VV+KLIPDSI KDIEK C
Sbjct: 182 VVSKLIPDSIGKDIEKTC 199
>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical protein
C25G4.5 protein.
Length = 1263
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -2
Query: 403 RVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARE-TSKTL 227
R H H LS+ SMP ++ T+RP + + L++ + + + RS R S +
Sbjct: 1122 RKVHINGCHTLLSLALSMPSRMGETVRPSSIVSFLLHIANENNLQIVQDRSKRSWMSDFI 1181
Query: 226 PFNPSEAI 203
N SE++
Sbjct: 1182 VLNSSESL 1189
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -2
Query: 415 LASMRVCHFLTIHLSLSVVRSMPWKLQ-STLRPCTY-SAINLNLRKDLSASVSACRSARE 242
+AS++ LT+ L L +P LQ L+P T S + + ++ S S S+ S+
Sbjct: 132 IASLQASSMLTVPL-LQAASHIPSMLQLCQLQPTTIQSPVYASTQQPASTSASSLFSSSS 190
Query: 241 TSKTLPFNPSEA 206
+S PF PSE+
Sbjct: 191 SSAFHPFRPSES 202
>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
Length = 1263
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -2
Query: 403 RVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARE-TSKTL 227
R H H LS+ SMP ++ T+RP + + L++ + + + RS R S +
Sbjct: 1122 RKVHINGCHTLLSLALSMPSRMGETVRPSSIVSFLLHIANENNLQIVQDRSKRSWMSDFI 1181
Query: 226 PFNPSEAI 203
N SE++
Sbjct: 1182 VLNSSESL 1189
>Z69787-7|CAA93643.1| 214|Caenorhabditis elegans Hypothetical
protein C44C10.9a protein.
Length = 214
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = -2
Query: 604 CSPPXLSSELVTSRVMISHIFFLIALT*VCWA*HVLRWL-----KESLLVKPMQKTRRTY 440
C P + ++I+ FLIAL C A ++ ++L KE + PMQ+T
Sbjct: 54 CIPQATTIPFWLMLILIALAIFLIALLLACLAYYLAKYLKSRPKKEKFIPSPMQETTLMM 113
Query: 439 PSVV 428
P V
Sbjct: 114 PKPV 117
>Z69634-5|CAA93456.1| 731|Caenorhabditis elegans Hypothetical
protein B0001.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 219 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRN 329
L+G + +S+ D +A TD E S + R IAE+++ R+
Sbjct: 201 LRGCSWIMSVVDGKAQTDGEFSDKDLREIAEFIRERH 237
>AC006610-1|AAK85447.4| 360|Caenorhabditis elegans Hypothetical
protein C30F12.1 protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 605 LFTTXPEFRVSDVACNDFTHFLSDCSDLSVLGVAR 501
+ +T P ++ V CNDF S C D+S ++R
Sbjct: 62 VLSTGPPPGLAPVQCNDFDSCYSSCDDISHPSLSR 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,129,955
Number of Sequences: 27780
Number of extensions: 314425
Number of successful extensions: 869
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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