Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_H16
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007293-1|AAP35957.1| 51|Homo sapiens ATP synthase, H+ transp... 52 2e-06
BC105811-1|AAI05812.1| 51|Homo sapiens ATP5E protein protein. 52 2e-06
BC003671-1|AAH03671.1| 51|Homo sapiens ATP synthase, H+ transp... 52 2e-06
BC001690-1|AAH01690.1| 51|Homo sapiens ATP synthase, H+ transp... 52 2e-06
AL591024-1|CAH70632.1| 51|Homo sapiens protein ( Human DNA seq... 52 2e-06
AL109840-12|CAC09372.1| 51|Homo sapiens ATP synthase, H+ trans... 52 2e-06
AF052955-1|AAF72736.1| 51|Homo sapiens F1-ATPase epsilon-subun... 52 2e-06
CR456474-1|CAG30360.1| 717|Homo sapiens dJ508I15.4 protein. 30 8.3
BX537962-1|CAD97926.1| 717|Homo sapiens hypothetical protein pr... 30 8.3
BC111717-1|AAI11718.1| 717|Homo sapiens unc-84 homolog B (C. el... 30 8.3
BC111549-1|AAI11550.1| 713|Homo sapiens UNC84B protein protein. 30 8.3
BC094797-1|AAH94797.1| 738|Homo sapiens UNC84B protein protein. 30 8.3
AY682988-1|AAT90500.1| 717|Homo sapiens SUN2 protein. 30 8.3
AL021707-7|CAI21604.1| 717|Homo sapiens protein ( Human DNA seq... 30 8.3
AB014568-1|BAA31643.1| 742|Homo sapiens KIAA0668 protein protein. 30 8.3
>BT007293-1|AAP35957.1| 51|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, epsilon subunit
protein.
Length = 51
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 98 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRV 220
WRQAGL+YI YS I AK +R +LK EF+A A K S+V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>BC105811-1|AAI05812.1| 51|Homo sapiens ATP5E protein protein.
Length = 51
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 98 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRV 220
WRQAGL+YI YS I AK +R +LK EF+A A K S+V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>BC003671-1|AAH03671.1| 51|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, epsilon subunit
protein.
Length = 51
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 98 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRV 220
WRQAGL+YI YS I AK +R +LK EF+A A K S+V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>BC001690-1|AAH01690.1| 51|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, epsilon subunit
protein.
Length = 51
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 98 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRV 220
WRQAGL+YI YS I AK +R +LK EF+A A K S+V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>AL591024-1|CAH70632.1| 51|Homo sapiens protein ( Human DNA
sequence from clone RP11-153M24 on chromosome 13
Contains a novel gene similar to ATP synthase (H+
transporting, mitochondrialnase, an).
Length = 51
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 98 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRV 220
WRQAGL+YI YS I AKV+R +LK EF+A A K + V++
Sbjct: 5 WRQAGLSYIRYSQICAKVVRDALKTEFKANAKKTSGNSVKI 45
>AL109840-12|CAC09372.1| 51|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, epsilon subunit
protein.
Length = 51
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 98 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRV 220
WRQAGL+YI YS I AK +R +LK EF+A A K S+V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>AF052955-1|AAF72736.1| 51|Homo sapiens F1-ATPase epsilon-subunit
protein.
Length = 51
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 98 WRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRV 220
WRQAGL+YI YS I AK +R +LK EF+A A K S+V++
Sbjct: 5 WRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKI 45
>CR456474-1|CAG30360.1| 717|Homo sapiens dJ508I15.4 protein.
Length = 717
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 138 SQPRCFAGH*SKNFEQRR*NVTNLTSESHLGPTDDLHVSYFSKLL 272
SQ F + +++ N+ L+ LGP+ D H SY+S+ L
Sbjct: 30 SQSTLFKDSPLRTLKRKSSNMKRLSPAPQLGPSSDAHTSYYSESL 74
>BX537962-1|CAD97926.1| 717|Homo sapiens hypothetical protein
protein.
Length = 717
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 138 SQPRCFAGH*SKNFEQRR*NVTNLTSESHLGPTDDLHVSYFSKLL 272
SQ F + +++ N+ L+ LGP+ D H SY+S+ L
Sbjct: 30 SQSTLFKDSPLRTLKRKSSNMKRLSPAPQLGPSSDAHTSYYSESL 74
>BC111717-1|AAI11718.1| 717|Homo sapiens unc-84 homolog B (C.
elegans) protein.
Length = 717
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 138 SQPRCFAGH*SKNFEQRR*NVTNLTSESHLGPTDDLHVSYFSKLL 272
SQ F + +++ N+ L+ LGP+ D H SY+S+ L
Sbjct: 30 SQSTLFKDSPLRTLKRKSSNMKRLSPAPQLGPSSDAHTSYYSESL 74
>BC111549-1|AAI11550.1| 713|Homo sapiens UNC84B protein protein.
Length = 713
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 138 SQPRCFAGH*SKNFEQRR*NVTNLTSESHLGPTDDLHVSYFSKLL 272
SQ F + +++ N+ L+ LGP+ D H SY+S+ L
Sbjct: 30 SQSTLFKDSPLRTLKRKSSNMKRLSPAPQLGPSSDAHTSYYSESL 74
>BC094797-1|AAH94797.1| 738|Homo sapiens UNC84B protein protein.
Length = 738
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 138 SQPRCFAGH*SKNFEQRR*NVTNLTSESHLGPTDDLHVSYFSKLL 272
SQ F + +++ N+ L+ LGP+ D H SY+S+ L
Sbjct: 30 SQSTLFKDSPLRTLKRKSSNMKRLSPAPQLGPSSDAHTSYYSESL 74
>AY682988-1|AAT90500.1| 717|Homo sapiens SUN2 protein.
Length = 717
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 138 SQPRCFAGH*SKNFEQRR*NVTNLTSESHLGPTDDLHVSYFSKLL 272
SQ F + +++ N+ L+ LGP+ D H SY+S+ L
Sbjct: 30 SQSTLFKDSPLRTLKRKSSNMKRLSPAPQLGPSSDAHTSYYSESL 74
>AL021707-7|CAI21604.1| 717|Homo sapiens protein ( Human DNA
sequence from clone RP3-508I15 on chromosome 22q12-13.
).
Length = 717
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 138 SQPRCFAGH*SKNFEQRR*NVTNLTSESHLGPTDDLHVSYFSKLL 272
SQ F + +++ N+ L+ LGP+ D H SY+S+ L
Sbjct: 30 SQSTLFKDSPLRTLKRKSSNMKRLSPAPQLGPSSDAHTSYYSESL 74
>AB014568-1|BAA31643.1| 742|Homo sapiens KIAA0668 protein protein.
Length = 742
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 138 SQPRCFAGH*SKNFEQRR*NVTNLTSESHLGPTDDLHVSYFSKLL 272
SQ F + +++ N+ L+ LGP+ D H SY+S+ L
Sbjct: 55 SQSTLFKDSPLRTLKRKSSNMKRLSPAPQLGPSSDAHTSYYSESL 99
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,726,689
Number of Sequences: 237096
Number of extensions: 1066872
Number of successful extensions: 1456
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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