Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_H04
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 51 7e-07
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 49 4e-06
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 48 9e-06
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 46 3e-05
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 46 3e-05
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 43 2e-04
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 39 0.004
02_01_0381 - 2764331-2764342,2768966-2769907 37 0.012
06_03_1255 + 28780181-28781172,28782065-28782932 35 0.049
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 33 0.20
08_01_0397 - 3509186-3510291,3510322-3512335 33 0.26
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 30 1.4
03_05_0824 + 27980191-27980243,27980633-27980671,27980974-279820... 28 5.6
01_06_1580 - 38406740-38407257,38407481-38407552,38408309-384083... 28 5.6
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +1
Query: 430 SVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQ 609
SV ++E + YR ITV G+D+P P + GFPEY+ + G +PT IQSQ
Sbjct: 61 SVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQ 120
Query: 610 G 612
G
Sbjct: 121 G 121
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 608 RGWPIALSGKNFVGIA 655
+GWP+AL G++ +GIA
Sbjct: 120 QGWPMALRGRDLIGIA 135
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 460 DDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQ 609
D YR + +T +G+++P PF+ EA+GFP I + G PT IQ+Q
Sbjct: 584 DAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQEIHAAGFLNPTPIQAQ 633
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 47.6 bits (108), Expect = 9e-06
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = +1
Query: 424 FYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQ 603
F + + + YR+ + IT++G + P+PF+ +++GFP I ++ G + PT IQ
Sbjct: 148 FSEAASGDRTSPEAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQ 207
Query: 604 SQ 609
+Q
Sbjct: 208 AQ 209
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 430 SVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQ 609
+V+ + YR ITV G D+P P + + FP+Y + G +PT IQSQ
Sbjct: 126 AVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQ 185
Query: 610 G 612
G
Sbjct: 186 G 186
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 608 RGWPIALSGKNFVGIA 655
+GWP+AL G++ +GIA
Sbjct: 185 QGWPMALKGRDMIGIA 200
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +1
Query: 466 YRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQ 609
YR + ITV+G ++P+P E GFP I ++ G + PT IQ+Q
Sbjct: 132 YRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQ 179
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +1
Query: 430 SVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQ 609
SV ++E DY +I V G D+P P GFP + + QG KPT IQ Q
Sbjct: 189 SVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQ 248
Query: 610 GM 615
+
Sbjct: 249 AL 250
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 469 RSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGMANS 624
RS I V G+D+P P + +SG PE + L+ G PT +Q Q + +S
Sbjct: 165 RSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSS 216
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 460 DDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGM 615
D+ R I V G D+P P D PE + L+ +GI +PT IQ QG+
Sbjct: 162 DELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGL 213
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 35.1 bits (77), Expect = 0.049
Identities = 21/52 (40%), Positives = 25/52 (48%)
Frame = +1
Query: 460 DDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGM 615
D R I V G D+P P PE I L+ +GI KPT IQ QG+
Sbjct: 153 DALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQVQGL 204
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 466 YRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGM 615
YR + + V G+D+P P SG + +K G KP IQ+Q +
Sbjct: 267 YRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQAQAL 316
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 466 YRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGM 615
YR + V G+D+P P SG + +K G KP IQ+Q +
Sbjct: 406 YRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQAL 455
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 475 DNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGM 615
D + V G+D+P P EA+G E + + G PT +Q M
Sbjct: 69 DIPVEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSM 115
>03_05_0824 +
27980191-27980243,27980633-27980671,27980974-27982023,
27983097-27983262,27983439-27983549,27983637-27983688,
27984691-27984859,27985604-27985883
Length = 639
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 354 GSIFYIAQSNIKRYKTTRATNLKIL 428
GSIFY++Q KT R T LKIL
Sbjct: 414 GSIFYLSQDERFVIKTLRKTELKIL 438
>01_06_1580 -
38406740-38407257,38407481-38407552,38408309-38408365,
38408476-38408532,38408643-38408699,38408809-38408865,
38409371-38409424,38409744-38409800,38410023-38410076,
38412208-38412220,38413530-38413580,38414134-38414193,
38414640-38414761,38415033-38415894,38416468-38416667,
38417159-38417238,38417525-38417619
Length = 821
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 436 KTEQKKEDDDYRSDNSITVIGQDIPSPF-VDIEASGFPEYIKTFLKMQGITKPTVI 600
+ +K D+DYR+D + + PF VD++ P K LK + K T +
Sbjct: 175 RDSEKPPDEDYRADKNSLSVNDGAEQPFPVDVKVQ--PSEAKMSLKRKKSNKKTYV 228
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,606,160
Number of Sequences: 37544
Number of extensions: 287304
Number of successful extensions: 479
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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