Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_H04
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical pr...    38   0.006
AC006665-5|AAF39907.1|  630|Caenorhabditis elegans Hypothetical ...    35   0.044
AF045641-1|AAK68386.1|  970|Caenorhabditis elegans Hypothetical ...    31   0.94 
U23169-4|AAC46697.1|  706|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z78416-1|CAB01682.1|  425|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF293976-1|AAG17881.1|  425|Caenorhabditis elegans CAB-1 protein.      29   3.8  
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U50309-2|AAG24136.2|  334|Caenorhabditis elegans Seven tm recept...    27   8.8  

>U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical
           protein F01F1.7 protein.
          Length = 730

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
 Frame = +1

Query: 421 RFYSVKTEQKKEDDD---YRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKP 591
           R + +K   +  D D   +R D +I++ G  +P P  + E +GFP+ +   +K  G  +P
Sbjct: 265 RHWRMKELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEP 324

Query: 592 TVIQSQGM 615
           T IQ Q +
Sbjct: 325 TPIQRQAI 332


>AC006665-5|AAF39907.1|  630|Caenorhabditis elegans Hypothetical
           protein H27M09.1 protein.
          Length = 630

 Score = 35.1 bits (77), Expect = 0.044
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
 Frame = +1

Query: 379 QILKGTKLRELQILRFYSVKTEQKKEDDDY---RSDNSITVIGQDIPSPFVDIEASGFPE 549
           ++ KG K  E  +  +      +++  +DY   R    I+  G  IP P        FP+
Sbjct: 139 ELTKGEKYEEPIVTAWRPPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPK 198

Query: 550 YIKTFL-KMQGITKPTVIQSQGM 615
            +  F+ K +GI  PT IQ QG+
Sbjct: 199 SLLEFMQKQKGIVTPTAIQIQGI 221


>AF045641-1|AAK68386.1|  970|Caenorhabditis elegans Hypothetical
           protein F53H1.1 protein.
          Length = 970

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +1

Query: 433 VKTEQKKEDDDYRSD-NSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQ 609
           ++   K E   YR + +SITV G D P P       G    +   LK    +KPT IQ+Q
Sbjct: 274 IRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQ 333

Query: 610 GM 615
            +
Sbjct: 334 AI 335


>U23169-4|AAC46697.1|  706|Caenorhabditis elegans Hypothetical
           protein C29H12.5 protein.
          Length = 706

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/69 (24%), Positives = 34/69 (49%)
 Frame = +1

Query: 364 SILHNQILKGTKLRELQILRFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGF 543
           S+LH+ +L+    R ++   F+S+     KE   Y +++ I+ + Q   S +   + +  
Sbjct: 442 SLLHHPVLQEPTARSVECFYFHSMLASPMKEIIHYHANDKISDVLQRFISLYHTSQEAED 501

Query: 544 PEYIKTFLK 570
            +YI  F K
Sbjct: 502 KKYIMMFTK 510


>Z78416-1|CAB01682.1|  425|Caenorhabditis elegans Hypothetical
           protein C23H4.1 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 397 KLRELQILRFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEY 552
           K+ +  +L++Y  + EQ K+DD Y       +    +P+ F + E     E+
Sbjct: 90  KINKEDLLKYYGKEVEQYKDDDSYMEYLIEYMKSHPVPAQFPNFEQEAEQEH 141


>AF293976-1|AAG17881.1|  425|Caenorhabditis elegans CAB-1 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 397 KLRELQILRFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEY 552
           K+ +  +L++Y  + EQ K+DD Y       +    +P+ F + E     E+
Sbjct: 90  KINKEDLLKYYGKEVEQYKDDDSYMEYLIEYMKSHPVPAQFPNFEQEAEQEH 141


>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical protein
            ZK593.4 protein.
          Length = 1477

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +1

Query: 307  QQIVETNVFHTHIIPKVQYSILHNQILKGTKLRELQILRFYSVKTEQKK 453
            Q + ET+ F+   I  V+Y I+H   +K      + +L  + +KT+ +K
Sbjct: 1022 QSLRETDWFYEKYINMVRYEIIHVAKIKSMIDAAIPVLSEFDLKTQLQK 1070


>U50309-2|AAG24136.2|  334|Caenorhabditis elegans Seven tm receptor
           protein 146 protein.
          Length = 334

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 101 YSSTELHIQPLAIHINARKCV-FIYSYLNFFIEIGYRVSWL 220
           Y+  E+  QP+ IHI +  CV F+ S L ++  +GY ++ L
Sbjct: 51  YAWIEILAQPI-IHIKSPACVVFMESPLKYYPVLGYNITCL 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,997,067
Number of Sequences: 27780
Number of extensions: 312659
Number of successful extensions: 767
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)